RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 MYO5BQ9ULV0 1848 aa11.54□□□□□ -0.56
CCL3-205ENST00000613928 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
CCL3-205ENST00000613928 NPHP4O75161 1426 aaPredicted RBP11.53□□□□□ -0.56
CCL3-205ENST00000613928 ZFYVE9O95405 1425 aa11.53□□□□□ -0.56
CCL3-205ENST00000613928 CTHP32929 405 aa11.53□□□□□ -0.56
CCL3-205ENST00000613928 PRKRIP1Q9H875 184 aaPredicted RBP11.53□□□□□ -0.56
CCL3-205ENST00000613928 EVA1BQ9NVM1 165 aa11.53□□□□□ -0.56
CCL3-205ENST00000613928 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
CCL3-205ENST00000613928 ADGRB1O14514 1584 aa11.53□□□□□ -0.56
CCL3-205ENST00000613928 TMF1P82094 1093 aa11.52□□□□□ -0.57
CCL3-205ENST00000613928 ANKLE2Q86XL3 938 aa11.52□□□□□ -0.57
CCL3-205ENST00000613928 MAP10Q9P2G4 905 aa11.52□□□□□ -0.57
CCL3-205ENST00000613928 KCNH2Q12809 1159 aa11.51□□□□□ -0.57
CCL3-205ENST00000613928 WASHC4Q2M389 1173 aa11.51□□□□□ -0.57
CCL3-205ENST00000613928 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
CCL3-205ENST00000613928 LRRC7Q96NW7 1537 aa11.5□□□□□ -0.57
CCL3-205ENST00000613928 GPR37L1O60883 481 aa11.5□□□□□ -0.57
CCL3-205ENST00000613928 S1PR4O95977 384 aa11.5□□□□□ -0.57
CCL3-205ENST00000613928 MMRN1Q13201 1228 aa11.5□□□□□ -0.57
CCL3-205ENST00000613928 FKBPLQ9UIM3 349 aa11.5□□□□□ -0.57
CCL3-205ENST00000613928 ZC3H4Q9UPT8 1303 aaKnown RBP11.5□□□□□ -0.57
CCL3-205ENST00000613928 EIF3AQ14152 1382 aaKnown RBP11.5□□□□□ -0.57
CCL3-205ENST00000613928 MED14O60244 1454 aa11.5□□□□□ -0.57
CCL3-205ENST00000613928 IRF5Q13568 498 aa11.49□□□□□ -0.57
CCL3-205ENST00000613928 CCDC184Q52MB2 194 aa11.49□□□□□ -0.57
CCL3-205ENST00000613928 ARMC2Q8NEN0 867 aa11.49□□□□□ -0.57
CCL3-205ENST00000613928 NLRP1Q9C000 1473 aa11.49□□□□□ -0.57
CCL3-205ENST00000613928 TMEM132EQ6IEE7 984 aa11.48□□□□□ -0.57
CCL3-205ENST00000613928 THEMISQ8N1K5 641 aaPredicted RBP11.48□□□□□ -0.57
CCL3-205ENST00000613928 ASXL1Q8IXJ9 1541 aa11.47□□□□□ -0.57
CCL3-205ENST00000613928 GGCXP38435 758 aa11.47□□□□□ -0.57
CCL3-205ENST00000613928 CCDC24Q8N4L8 307 aa11.47□□□□□ -0.57
CCL3-205ENST00000613928 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.57
CCL3-205ENST00000613928 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.57
CCL3-205ENST00000613928 RGS17Q9UGC6 210 aaPredicted RBP11.46□□□□□ -0.57
CCL3-205ENST00000613928 TRAK1Q9UPV9 953 aa11.46□□□□□ -0.57
CCL3-205ENST00000613928 RIMS2Q9UQ26 1411 aa11.45□□□□□ -0.58
CCL3-205ENST00000613928 SBNO2Q9Y2G9 1366 aa11.45□□□□□ -0.58
CCL3-205ENST00000613928 NBPF14Q5TI25 921 aa11.45□□□□□ -0.58
CCL3-205ENST00000613928 FCF1Q9Y324 198 aaKnown RBP11.45□□□□□ -0.58
CCL3-205ENST00000613928 SETD1AO15047 1707 aaKnown RBP11.45□□□□□ -0.58
CCL3-205ENST00000613928 CENPJQ9HC77 1338 aaPredicted RBP11.44□□□□□ -0.58
CCL3-205ENST00000613928 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
CCL3-205ENST00000613928 PANK3Q9H999 370 aa11.44□□□□□ -0.58
CCL3-205ENST00000613928 UBR1Q8IWV7 1749 aa11.43□□□□□ -0.58
CCL3-205ENST00000613928 CNGB1Q14028 1251 aaPredicted RBP11.43□□□□□ -0.58
CCL3-205ENST00000613928 UNC93B1Q9H1C4 597 aa11.43□□□□□ -0.58
CCL3-205ENST00000613928 C1orf115Q9H7X2 142 aa11.43□□□□□ -0.58
CCL3-205ENST00000613928 ARHGEF28Q8N1W1 1705 aaKnown RBP11.43□□□□□ -0.58
CCL3-205ENST00000613928 KDM5AP29375 1690 aaKnown RBP11.43□□□□□ -0.58
CCL3-205ENST00000613928 MYOM1P52179 1685 aa11.43□□□□□ -0.58
CCL3-205ENST00000613928 QRICH2Q9H0J4 1663 aa11.43□□□□□ -0.58
CCL3-205ENST00000613928 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
CCL3-205ENST00000613928 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
CCL3-205ENST00000613928 VAC14Q08AM6 782 aa11.41□□□□□ -0.58
CCL3-205ENST00000613928 MRS2Q9HD23 443 aa11.41□□□□□ -0.58
CCL3-205ENST00000613928 GPSM3Q9Y4H4 160 aa11.41□□□□□ -0.58
CCL3-205ENST00000613928 KTN1Q86UP2 1357 aaKnown RBP11.41□□□□□ -0.58
CCL3-205ENST00000613928 PARD3Q8TEW0 1356 aa11.41□□□□□ -0.58
CCL3-205ENST00000613928 POM121CA8CG34 1229 aa11.4□□□□□ -0.58
CCL3-205ENST00000613928 SOX11P35716 441 aa11.4□□□□□ -0.58
CCL3-205ENST00000613928 NR1H3Q13133 447 aa11.4□□□□□ -0.58
CCL3-205ENST00000613928 RALBP1Q15311 655 aa11.4□□□□□ -0.58
CCL3-205ENST00000613928 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
CCL3-205ENST00000613928 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
CCL3-205ENST00000613928 YTHDC2Q9H6S0 1430 aaKnown RBP11.4□□□□□ -0.58
CCL3-205ENST00000613928 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
CCL3-205ENST00000613928 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
CCL3-205ENST00000613928 PTK2Q05397 1052 aa11.39□□□□□ -0.59
CCL3-205ENST00000613928 PTCRAQ6ISU1 281 aaPredicted RBP11.39□□□□□ -0.59
CCL3-205ENST00000613928 POTEAQ6S8J7 498 aa11.39□□□□□ -0.59
CCL3-205ENST00000613928 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCL3-205ENST00000613928 CALR3Q96L12 384 aaKnown RBP11.39□□□□□ -0.59
CCL3-205ENST00000613928 ROBO1Q9Y6N7 1651 aa11.39□□□□□ -0.59
CCL3-205ENST00000613928 MYBBP1AQ9BQG0 1328 aaKnown RBP11.38□□□□□ -0.59
CCL3-205ENST00000613928 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
CCL3-205ENST00000613928 GLMNQ92990 594 aa11.38□□□□□ -0.59
CCL3-205ENST00000613928 CCDC97Q96F63 343 aaPredicted RBP11.38□□□□□ -0.59
CCL3-205ENST00000613928 STK26Q9P289 416 aa11.38□□□□□ -0.59
CCL3-205ENST00000613928 TULP4Q9NRJ4 1543 aa11.38□□□□□ -0.59
CCL3-205ENST00000613928 TMEM2Q9UHN6 1383 aa11.38□□□□□ -0.59
CCL3-205ENST00000613928 PPEF1O14829 653 aaPredicted RBP11.37□□□□□ -0.59
CCL3-205ENST00000613928 ZBTB24O43167 697 aaPredicted RBP11.37□□□□□ -0.59
CCL3-205ENST00000613928 FBXO45P0C2W1 286 aa11.37□□□□□ -0.59
CCL3-205ENST00000613928 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
CCL3-205ENST00000613928 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
CCL3-205ENST00000613928 SERPINA10Q9UK55 444 aa11.37□□□□□ -0.59
CCL3-205ENST00000613928 CC2D1BQ5T0F9 858 aaKnown RBP11.36□□□□□ -0.59
CCL3-205ENST00000613928 PPP1R18Q6NYC8 613 aa11.36□□□□□ -0.59
CCL3-205ENST00000613928 FAM9BQ8IZU0 186 aa11.36□□□□□ -0.59
CCL3-205ENST00000613928 ZNF592Q92610 1267 aa11.36□□□□□ -0.59
CCL3-205ENST00000613928 PUS7Q96PZ0 661 aaKnown RBP11.36□□□□□ -0.59
CCL3-205ENST00000613928 BRD4O60885 1362 aaPredicted RBP11.36□□□□□ -0.59
CCL3-205ENST00000613928 LRPPRCP42704 1394 aaKnown RBP11.36□□□□□ -0.59
CCL3-205ENST00000613928 SLIT1O75093 1534 aa11.35□□□□□ -0.59
CCL3-205ENST00000613928 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
CCL3-205ENST00000613928 LTKP29376 864 aa11.35□□□□□ -0.59
CCL3-205ENST00000613928 ARHGAP23Q9P227 1491 aa11.35□□□□□ -0.59
CCL3-205ENST00000613928 SEMA3FQ13275 785 aa11.34□□□□□ -0.59
CCL3-205ENST00000613928 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms