RNA–Protein interactions for RNA: ENST00000613563.1

GRAMD4P4-201, Transcript of GRAM domain containing 4 pseudogene 4, humanhuman

BASIC

Gene GRAMD4P4, Length 1,115 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4P4-201ENST00000613563 CANXP27824 592 aaKnown RBP29.54■■■□□ 2.32
GRAMD4P4-201ENST00000613563 MCM10Q7L590 875 aa29.54■■■□□ 2.32
GRAMD4P4-201ENST00000613563 PXDNLA1KZ92 1463 aa29.54■■■□□ 2.32
GRAMD4P4-201ENST00000613563 FMNL2Q96PY5 1086 aa29.53■■■□□ 2.32
GRAMD4P4-201ENST00000613563 TGFB2P61812 414 aa29.52■■■□□ 2.32
GRAMD4P4-201ENST00000613563 N4BP2Q86UW6 1770 aaPredicted RBP29.52■■■□□ 2.32
GRAMD4P4-201ENST00000613563 KCNQ3O43525 872 aa29.51■■■□□ 2.31
GRAMD4P4-201ENST00000613563 NEFMP07197 916 aa29.51■■■□□ 2.31
GRAMD4P4-201ENST00000613563 DDR1Q08345 913 aa29.51■■■□□ 2.31
GRAMD4P4-201ENST00000613563 DDX10Q13206 875 aaKnown RBP29.51■■■□□ 2.31
GRAMD4P4-201ENST00000613563 TEX13AQ9BXU3 409 aaPredicted RBP29.51■■■□□ 2.31
GRAMD4P4-201ENST00000613563 NARFQ9UHQ1 456 aa29.51■■■□□ 2.31
GRAMD4P4-201ENST00000613563 KIAA1551Q9HCM1 1747 aa29.51■■■□□ 2.31
GRAMD4P4-201ENST00000613563 A0A0G2JLW4 131 aa29.5■■■□□ 2.31
GRAMD4P4-201ENST00000613563 DCTN1Q14203 1278 aa29.5■■■□□ 2.31
GRAMD4P4-201ENST00000613563 HTATSF1O43719 755 aaKnown RBP29.48■■■□□ 2.31
GRAMD4P4-201ENST00000613563 RALBP1Q15311 655 aa29.48■■■□□ 2.31
GRAMD4P4-201ENST00000613563 DPEP1P16444 411 aa29.47■■■□□ 2.31
GRAMD4P4-201ENST00000613563 TM4SF1P30408 202 aa29.47■■■□□ 2.31
GRAMD4P4-201ENST00000613563 POLRMTO00411 1230 aaKnown RBP29.46■■■□□ 2.31
GRAMD4P4-201ENST00000613563 A0A087WZG4 1122 aa29.45■■■□□ 2.31
GRAMD4P4-201ENST00000613563 EIF5P55010 431 aaKnown RBP29.45■■■□□ 2.31
GRAMD4P4-201ENST00000613563 BCS1LQ9Y276 419 aa29.45■■■□□ 2.31
GRAMD4P4-201ENST00000613563 ZNF330Q9Y3S2 320 aaPredicted RBP29.45■■■□□ 2.31
GRAMD4P4-201ENST00000613563 BCL2L12Q9HB09 334 aa29.44■■■□□ 2.3
GRAMD4P4-201ENST00000613563 NFIXQ14938 502 aa29.43■■■□□ 2.3
GRAMD4P4-201ENST00000613563 PLEKHF1Q96S99 279 aa29.43■■■□□ 2.3
GRAMD4P4-201ENST00000613563 DLG5Q8TDM6 1919 aa29.42■■■□□ 2.3
GRAMD4P4-201ENST00000613563 A1BGP04217 495 aa29.42■■■□□ 2.3
GRAMD4P4-201ENST00000613563 PNNQ9H307 717 aaKnown RBP29.41■■■□□ 2.3
GRAMD4P4-201ENST00000613563 IL6STP40189 918 aaPredicted RBP29.4■■■□□ 2.3
GRAMD4P4-201ENST00000613563 NPM2Q86SE8 214 aaKnown RBP29.4■■■□□ 2.3
GRAMD4P4-201ENST00000613563 MAPK8IP3Q9UPT6 1336 aa29.4■■■□□ 2.3
GRAMD4P4-201ENST00000613563 TAF7Q15545 349 aaPredicted RBP29.39■■■□□ 2.3
GRAMD4P4-201ENST00000613563 USP16Q9Y5T5 823 aa29.39■■■□□ 2.3
GRAMD4P4-201ENST00000613563 AFDNP55196 1824 aaKnown RBP29.38■■■□□ 2.29
GRAMD4P4-201ENST00000613563 PRAMEF22A3QJZ6 481 aa29.38■■■□□ 2.29
GRAMD4P4-201ENST00000613563 SNRPA1P09661 255 aaKnown RBP29.38■■■□□ 2.29
GRAMD4P4-201ENST00000613563 KCNA3P22001 575 aa29.38■■■□□ 2.29
GRAMD4P4-201ENST00000613563 NFE2L2Q16236 605 aa29.38■■■□□ 2.29
GRAMD4P4-201ENST00000613563 BICDL1Q6ZP65 573 aa29.38■■■□□ 2.29
GRAMD4P4-201ENST00000613563 TBC1D2BQ9UPU7 963 aa29.38■■■□□ 2.29
GRAMD4P4-201ENST00000613563 BRCA1P38398 1863 aaKnown RBP29.38■■■□□ 2.29
GRAMD4P4-201ENST00000613563 ATP10DQ9P241 1426 aa29.37■■■□□ 2.29
GRAMD4P4-201ENST00000613563 MIS18AQ9NYP9 233 aa29.37■■■□□ 2.29
GRAMD4P4-201ENST00000613563 SERPINB2P05120 415 aa29.36■■■□□ 2.29
GRAMD4P4-201ENST00000613563 CHRNA5P30532 468 aa29.36■■■□□ 2.29
GRAMD4P4-201ENST00000613563 PIM2Q9P1W9 311 aa29.36■■■□□ 2.29
GRAMD4P4-201ENST00000613563 MYBBP1AQ9BQG0 1328 aaKnown RBP29.36■■■□□ 2.29
GRAMD4P4-201ENST00000613563 PIP4K2AP48426 406 aaPredicted RBP29.35■■■□□ 2.29
GRAMD4P4-201ENST00000613563 SCN7AQ01118 1682 aa29.34■■■□□ 2.29
GRAMD4P4-201ENST00000613563 NRXN2Q9P2S2 1712 aa29.34■■■□□ 2.29
GRAMD4P4-201ENST00000613563 GIGYF1O75420 1035 aaPredicted RBP29.33■■■□□ 2.29
GRAMD4P4-201ENST00000613563 TBC1D9BQ66K14 1250 aa29.33■■■□□ 2.29
GRAMD4P4-201ENST00000613563 ARHGAP27Q6ZUM4 889 aa29.33■■■□□ 2.29
GRAMD4P4-201ENST00000613563 ADCY9O60503 1353 aa29.32■■■□□ 2.28
GRAMD4P4-201ENST00000613563 DALRD3Q5D0E6 543 aaKnown RBP29.32■■■□□ 2.28
GRAMD4P4-201ENST00000613563 PNISRQ8TF01 805 aaKnown RBP29.32■■■□□ 2.28
GRAMD4P4-201ENST00000613563 THUMPD2Q9BTF0 503 aaKnown RBP29.32■■■□□ 2.28
GRAMD4P4-201ENST00000613563 DZIP3Q86Y13 1208 aaKnown RBP29.3■■■□□ 2.28
GRAMD4P4-201ENST00000613563 ARFGEF1Q9Y6D6 1849 aa29.29■■■□□ 2.28
GRAMD4P4-201ENST00000613563 CAMTA2O94983 1202 aa29.29■■■□□ 2.28
GRAMD4P4-201ENST00000613563 KDM3BQ7LBC6 1761 aa29.29■■■□□ 2.28
GRAMD4P4-201ENST00000613563 ZNF526Q8TF50 670 aaPredicted RBP29.28■■■□□ 2.28
GRAMD4P4-201ENST00000613563 C1QTNF8P60827 252 aa29.27■■■□□ 2.28
GRAMD4P4-201ENST00000613563 GPBP1L1Q9HC44 474 aaPredicted RBP29.27■■■□□ 2.28
GRAMD4P4-201ENST00000613563 CARMIL3Q8ND23 1372 aa29.26■■■□□ 2.28
GRAMD4P4-201ENST00000613563 BCORQ6W2J9 1755 aa29.26■■■□□ 2.28
GRAMD4P4-201ENST00000613563 RIPK4P57078 832 aa29.26■■■□□ 2.27
GRAMD4P4-201ENST00000613563 NBPF26B4DH59 902 aa29.25■■■□□ 2.27
GRAMD4P4-201ENST00000613563 NBPF10Q6P3W6 841 aaKnown RBP29.25■■■□□ 2.27
GRAMD4P4-201ENST00000613563 NBPF15Q8N660 670 aa29.25■■■□□ 2.27
GRAMD4P4-201ENST00000613563 LAMB4A4D0S4 1761 aa29.25■■■□□ 2.27
GRAMD4P4-201ENST00000613563 C2CD5Q86YS7 1000 aa29.24■■■□□ 2.27
GRAMD4P4-201ENST00000613563 SETDB2Q96T68 719 aa29.24■■■□□ 2.27
GRAMD4P4-201ENST00000613563 EIF4A1P60842 406 aaKnown RBP29.23■■■□□ 2.27
GRAMD4P4-201ENST00000613563 WDR43Q15061 677 aaKnown RBP eCLIP29.22■■■□□ 2.27
GRAMD4P4-201ENST00000613563 PRR5LQ6MZQ0 368 aa29.22■■■□□ 2.27
GRAMD4P4-201ENST00000613563 CCDC146Q8IYE0 955 aa29.22■■■□□ 2.27
GRAMD4P4-201ENST00000613563 CCDC24Q8N4L8 307 aa29.22■■■□□ 2.27
GRAMD4P4-201ENST00000613563 H0YIN7 160 aa29.21■■■□□ 2.27
GRAMD4P4-201ENST00000613563 NPHP1O15259 732 aa29.21■■■□□ 2.27
GRAMD4P4-201ENST00000613563 TMPOP42166 694 aaKnown RBP29.21■■■□□ 2.27
GRAMD4P4-201ENST00000613563 DLEC1Q9Y238 1755 aa29.21■■■□□ 2.27
GRAMD4P4-201ENST00000613563 PRKRIP1Q9H875 184 aaPredicted RBP29.2■■■□□ 2.26
GRAMD4P4-201ENST00000613563 ZNF652Q9Y2D9 606 aa29.2■■■□□ 2.26
GRAMD4P4-201ENST00000613563 LMOD3Q0VAK6 560 aa29.19■■■□□ 2.26
GRAMD4P4-201ENST00000613563 CLEC4GQ6UXB4 293 aa29.19■■■□□ 2.26
GRAMD4P4-201ENST00000613563 CNBD1Q8NA66 436 aa29.19■■■□□ 2.26
GRAMD4P4-201ENST00000613563 TSPYL4Q9UJ04 414 aa29.19■■■□□ 2.26
GRAMD4P4-201ENST00000613563 RRP7AQ9Y3A4 280 aaKnown RBP29.19■■■□□ 2.26
GRAMD4P4-201ENST00000613563 ANKRD31Q8N7Z5 1873 aa29.19■■■□□ 2.26
GRAMD4P4-201ENST00000613563 TTLL6Q8N841 843 aa29.18■■■□□ 2.26
GRAMD4P4-201ENST00000613563 BRIP1Q9BX63 1249 aa29.18■■■□□ 2.26
GRAMD4P4-201ENST00000613563 PDE6BP35913 854 aa29.17■■■□□ 2.26
GRAMD4P4-201ENST00000613563 NEUROD2Q15784 382 aa29.17■■■□□ 2.26
GRAMD4P4-201ENST00000613563 C9orf131Q5VYM1 1079 aa29.17■■■□□ 2.26
GRAMD4P4-201ENST00000613563 ST5P78524 1137 aa29.16■■■□□ 2.26
GRAMD4P4-201ENST00000613563 NGEFQ8N5V2 710 aa29.16■■■□□ 2.26
GRAMD4P4-201ENST00000613563 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms