RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 LMNB1P20700 586 aa23.57■■□□□ 1.36
CSNK1E-215ENST00000612795 DNAJC10Q8IXB1 793 aa23.57■■□□□ 1.36
CSNK1E-215ENST00000612795 SOS1Q07889 1333 aaPredicted RBP23.57■■□□□ 1.36
CSNK1E-215ENST00000612795 COL15A1P39059 1388 aa23.56■■□□□ 1.36
CSNK1E-215ENST00000612795 VEGFAP15692 232 aaPredicted RBP23.56■■□□□ 1.36
CSNK1E-215ENST00000612795 SULT6B1Q6IMI4 303 aa23.56■■□□□ 1.36
CSNK1E-215ENST00000612795 DICER1Q9UPY3 1922 aaKnown RBP23.56■■□□□ 1.36
CSNK1E-215ENST00000612795 GLTPD2A6NH11 291 aa23.55■■□□□ 1.36
CSNK1E-215ENST00000612795 PRELPP51888 382 aa23.54■■□□□ 1.36
CSNK1E-215ENST00000612795 NFIXQ14938 502 aa23.54■■□□□ 1.36
CSNK1E-215ENST00000612795 MRC1P22897 1456 aa23.54■■□□□ 1.36
CSNK1E-215ENST00000612795 HSPA1AP0DMV8 641 aaKnown RBP23.53■■□□□ 1.36
CSNK1E-215ENST00000612795 HSPA1BP0DMV9 641 aaKnown RBP23.53■■□□□ 1.36
CSNK1E-215ENST00000612795 NARFQ9UHQ1 456 aa23.53■■□□□ 1.36
CSNK1E-215ENST00000612795 CACNA1SQ13698 1873 aa23.53■■□□□ 1.36
CSNK1E-215ENST00000612795 MORC1Q86VD1 984 aa23.52■■□□□ 1.36
CSNK1E-215ENST00000612795 TTLL6Q8N841 843 aa23.52■■□□□ 1.36
CSNK1E-215ENST00000612795 SLC52A2Q9HAB3 445 aa23.52■■□□□ 1.36
CSNK1E-215ENST00000612795 UBR2Q8IWV8 1755 aa23.52■■□□□ 1.36
CSNK1E-215ENST00000612795 ANKRD31Q8N7Z5 1873 aa23.51■■□□□ 1.35
CSNK1E-215ENST00000612795 AKAP4Q5JQC9 854 aa23.51■■□□□ 1.35
CSNK1E-215ENST00000612795 PANK3Q9H999 370 aa23.51■■□□□ 1.35
CSNK1E-215ENST00000612795 FER1L6Q2WGJ9 1857 aa23.5■■□□□ 1.35
CSNK1E-215ENST00000612795 SERPINB2P05120 415 aa23.5■■□□□ 1.35
CSNK1E-215ENST00000612795 CYP19A1P11511 503 aaPredicted RBP23.5■■□□□ 1.35
CSNK1E-215ENST00000612795 C2CD5Q86YS7 1000 aa23.5■■□□□ 1.35
CSNK1E-215ENST00000612795 ZBTB1Q9Y2K1 713 aa23.5■■□□□ 1.35
CSNK1E-215ENST00000612795 COL11A2P13942 1736 aaPredicted RBP23.49■■□□□ 1.35
CSNK1E-215ENST00000612795 CARMIL3Q8ND23 1372 aa23.49■■□□□ 1.35
CSNK1E-215ENST00000612795 SCN7AQ01118 1682 aa23.48■■□□□ 1.35
CSNK1E-215ENST00000612795 H0YIN7 160 aa23.48■■□□□ 1.35
CSNK1E-215ENST00000612795 SLC39A6Q13433 755 aa23.48■■□□□ 1.35
CSNK1E-215ENST00000612795 NFKBIEO00221 500 aa23.46■■□□□ 1.35
CSNK1E-215ENST00000612795 DPY19L2Q6NUT2 758 aa23.46■■□□□ 1.35
CSNK1E-215ENST00000612795 BCL2L12Q9HB09 334 aa23.46■■□□□ 1.35
CSNK1E-215ENST00000612795 LGR6Q9HBX8 967 aa23.46■■□□□ 1.35
CSNK1E-215ENST00000612795 TIMELESSQ9UNS1 1208 aa23.46■■□□□ 1.35
CSNK1E-215ENST00000612795 IL13P35225 146 aa23.45■■□□□ 1.34
CSNK1E-215ENST00000612795 RNMTO43148 476 aaKnown RBP23.44■■□□□ 1.34
CSNK1E-215ENST00000612795 BICDL1Q6ZP65 573 aa23.44■■□□□ 1.34
CSNK1E-215ENST00000612795 CANXP27824 592 aaKnown RBP23.43■■□□□ 1.34
CSNK1E-215ENST00000612795 ARFGEF2Q9Y6D5 1785 aa23.42■■□□□ 1.34
CSNK1E-215ENST00000612795 EIF4G2P78344 907 aaKnown RBP eCLIP23.41■■□□□ 1.34
CSNK1E-215ENST00000612795 VSIG10Q8N0Z9 540 aa23.41■■□□□ 1.34
CSNK1E-215ENST00000612795 ZNF622Q969S3 477 aaKnown RBP eCLIP23.41■■□□□ 1.347e-8■■■□□ 16.9
CSNK1E-215ENST00000612795 POTECB2RU33 542 aa23.4■■□□□ 1.34
CSNK1E-215ENST00000612795 ERFEQ4G0M1 354 aa23.4■■□□□ 1.34
CSNK1E-215ENST00000612795 ZNF219Q9P2Y4 722 aaPredicted RBP23.4■■□□□ 1.34
CSNK1E-215ENST00000612795 KNSTRNQ9Y448 316 aa23.4■■□□□ 1.34
CSNK1E-215ENST00000612795 HMOX1P09601 288 aa23.39■■□□□ 1.33
CSNK1E-215ENST00000612795 TTC5Q8N0Z6 440 aa23.39■■□□□ 1.33
CSNK1E-215ENST00000612795 PDZRN3Q9UPQ7 1066 aa23.39■■□□□ 1.33
CSNK1E-215ENST00000612795 A0A087WZG4 1122 aa23.38■■□□□ 1.33
CSNK1E-215ENST00000612795 C21orf2O43822 256 aa23.38■■□□□ 1.33
CSNK1E-215ENST00000612795 STARD3NLO95772 234 aa23.38■■□□□ 1.33
CSNK1E-215ENST00000612795 PDE6BP35913 854 aa23.38■■□□□ 1.33
CSNK1E-215ENST00000612795 SLX4Q8IY92 1834 aa23.38■■□□□ 1.33
CSNK1E-215ENST00000612795 HSPA5P11021 654 aaKnown RBP23.37■■□□□ 1.33
CSNK1E-215ENST00000612795 CREBZFQ9NS37 354 aa23.37■■□□□ 1.33
CSNK1E-215ENST00000612795 MKRN1Q9UHC7 482 aaKnown RBP23.37■■□□□ 1.33
CSNK1E-215ENST00000612795 ZNF330Q9Y3S2 320 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-215ENST00000612795 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-215ENST00000612795 BCORQ6W2J9 1755 aa23.37■■□□□ 1.33
CSNK1E-215ENST00000612795 SCN4AP35499 1836 aa23.36■■□□□ 1.33
CSNK1E-215ENST00000612795 TBC1D9BQ66K14 1250 aa23.36■■□□□ 1.33
CSNK1E-215ENST00000612795 CHADLQ6NUI6 762 aa23.36■■□□□ 1.33
CSNK1E-215ENST00000612795 TAOK3Q9H2K8 898 aa23.36■■□□□ 1.33
CSNK1E-215ENST00000612795 NPHP1O15259 732 aa23.35■■□□□ 1.33
CSNK1E-215ENST00000612795 EIF5P55010 431 aaKnown RBP23.35■■□□□ 1.33
CSNK1E-215ENST00000612795 MTHFSDQ2M296 383 aaKnown RBP23.35■■□□□ 1.33
CSNK1E-215ENST00000612795 BRIP1Q9BX63 1249 aa23.35■■□□□ 1.33
CSNK1E-215ENST00000612795 PRR5LQ6MZQ0 368 aa23.34■■□□□ 1.33
CSNK1E-215ENST00000612795 CCDC24Q8N4L8 307 aa23.34■■□□□ 1.33
CSNK1E-215ENST00000612795 LTBP3Q9NS15 1303 aa23.33■■□□□ 1.32
CSNK1E-215ENST00000612795 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
CSNK1E-215ENST00000612795 DDNO94850 711 aaPredicted RBP23.31■■□□□ 1.32
CSNK1E-215ENST00000612795 POTEIP0CG38 1075 aa23.31■■□□□ 1.32
CSNK1E-215ENST00000612795 POTEJP0CG39 1038 aa23.31■■□□□ 1.32
CSNK1E-215ENST00000612795 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
CSNK1E-215ENST00000612795 TBC1D2BQ9UPU7 963 aa23.31■■□□□ 1.32
CSNK1E-215ENST00000612795 HEG1Q9ULI3 1381 aa23.3■■□□□ 1.32
CSNK1E-215ENST00000612795 CNBD1Q8NA66 436 aa23.3■■□□□ 1.32
CSNK1E-215ENST00000612795 CNKSR1Q969H4 720 aa23.3■■□□□ 1.32
CSNK1E-215ENST00000612795 ST5P78524 1137 aa23.29■■□□□ 1.32
CSNK1E-215ENST00000612795 TEFQ10587 303 aa23.29■■□□□ 1.32
CSNK1E-215ENST00000612795 SOGA3Q5TF21 947 aa23.29■■□□□ 1.32
CSNK1E-215ENST00000612795 CNTNAP1P78357 1384 aa23.28■■□□□ 1.32
CSNK1E-215ENST00000612795 IQCA1LA6NCM1 817 aa23.28■■□□□ 1.32
CSNK1E-215ENST00000612795 PRPF40BQ6NWY9 871 aaKnown RBP23.28■■□□□ 1.32
CSNK1E-215ENST00000612795 ZNF496Q96IT1 587 aaPredicted RBP23.28■■□□□ 1.32
CSNK1E-215ENST00000612795 SETDB2Q96T68 719 aa23.28■■□□□ 1.32
CSNK1E-215ENST00000612795 TEX13AQ9BXU3 409 aaPredicted RBP23.28■■□□□ 1.32
CSNK1E-215ENST00000612795 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
CSNK1E-215ENST00000612795 DIAPH1O60610 1272 aaKnown RBP23.27■■□□□ 1.32
CSNK1E-215ENST00000612795 IL6STP40189 918 aaPredicted RBP23.27■■□□□ 1.32
CSNK1E-215ENST00000612795 AMER1Q5JTC6 1135 aaPredicted RBP23.27■■□□□ 1.32
CSNK1E-215ENST00000612795 STYK1Q6J9G0 422 aa23.27■■□□□ 1.32
CSNK1E-215ENST00000612795 FOXN1O15353 648 aa23.26■■□□□ 1.31
CSNK1E-215ENST00000612795 ZNF790Q6PG37 636 aa23.26■■□□□ 1.31
CSNK1E-215ENST00000612795 LDHDQ86WU2 507 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms