RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CCDC88AQ3V6T2 1871 aa32.06■■■□□ 2.72
MMP28-203ENST00000612672 PRELPP51888 382 aa32.06■■■□□ 2.72
MMP28-203ENST00000612672 RASSF7Q02833 373 aa32.06■■■□□ 2.72
MMP28-203ENST00000612672 AKAP4Q5JQC9 854 aa32.05■■■□□ 2.72
MMP28-203ENST00000612672 TIAM2Q8IVF5 1701 aa32.05■■■□□ 2.72
MMP28-203ENST00000612672 CLSPNQ9HAW4 1339 aa32.04■■■□□ 2.72
MMP28-203ENST00000612672 CYP19A1P11511 503 aaPredicted RBP32.04■■■□□ 2.72
MMP28-203ENST00000612672 BCL2L12Q9HB09 334 aa32.04■■■□□ 2.72
MMP28-203ENST00000612672 RRAGCQ9HB90 399 aa32.04■■■□□ 2.72
MMP28-203ENST00000612672 ZBTB1Q9Y2K1 713 aa32.03■■■□□ 2.72
MMP28-203ENST00000612672 COL15A1P39059 1388 aa32.03■■■□□ 2.72
MMP28-203ENST00000612672 NFIXQ14938 502 aa32.02■■■□□ 2.72
MMP28-203ENST00000612672 PCGF6Q9BYE7 350 aa32.02■■■□□ 2.72
MMP28-203ENST00000612672 CARMIL3Q8ND23 1372 aa32.02■■■□□ 2.72
MMP28-203ENST00000612672 ANKRD31Q8N7Z5 1873 aa32.01■■■□□ 2.72
MMP28-203ENST00000612672 RNMTO43148 476 aaKnown RBP32.01■■■□□ 2.71
MMP28-203ENST00000612672 AMER1Q5JTC6 1135 aaPredicted RBP32.01■■■□□ 2.71
MMP28-203ENST00000612672 KDM2BQ8NHM5 1336 aa32■■■□□ 2.71
MMP28-203ENST00000612672 ZPR1O75312 459 aa32■■■□□ 2.71
MMP28-203ENST00000612672 HMOX1P09601 288 aa32■■■□□ 2.71
MMP28-203ENST00000612672 C16orf71Q8IYS4 520 aaPredicted RBP32■■■□□ 2.71
MMP28-203ENST00000612672 KLRG1Q96E93 195 aa32■■■□□ 2.71
MMP28-203ENST00000612672 FSTL1Q12841 308 aa31.99■■■□□ 2.71
MMP28-203ENST00000612672 NARFQ9UHQ1 456 aa31.99■■■□□ 2.71
MMP28-203ENST00000612672 COL11A2P13942 1736 aaPredicted RBP31.97■■■□□ 2.71
MMP28-203ENST00000612672 KNSTRNQ9Y448 316 aa31.96■■■□□ 2.71
MMP28-203ENST00000612672 MTHFSDQ2M296 383 aaKnown RBP31.95■■■□□ 2.71
MMP28-203ENST00000612672 JMYQ8N9B5 988 aa31.95■■■□□ 2.71
MMP28-203ENST00000612672 SCN7AQ01118 1682 aa31.95■■■□□ 2.7
MMP28-203ENST00000612672 SIPA1L3O60292 1781 aaPredicted RBP31.94■■■□□ 2.7
MMP28-203ENST00000612672 SERPINB2P05120 415 aa31.92■■■□□ 2.7
MMP28-203ENST00000612672 COL13A1Q5TAT6 717 aaPredicted RBP31.91■■■□□ 2.7
MMP28-203ENST00000612672 NFKBIEO00221 500 aa31.89■■■□□ 2.7
MMP28-203ENST00000612672 COL3A1P02461 1466 aaPredicted RBP31.89■■■□□ 2.7
MMP28-203ENST00000612672 CANXP27824 592 aaKnown RBP31.88■■■□□ 2.69
MMP28-203ENST00000612672 ZC3H4Q9UPT8 1303 aaKnown RBP31.88■■■□□ 2.69
MMP28-203ENST00000612672 FER1L6Q2WGJ9 1857 aa31.88■■■□□ 2.69
MMP28-203ENST00000612672 DICER1Q9UPY3 1922 aaKnown RBP31.87■■■□□ 2.69
MMP28-203ENST00000612672 LMNB1P20700 586 aa31.87■■■□□ 2.69
MMP28-203ENST00000612672 C2CD5Q86YS7 1000 aa31.87■■■□□ 2.69
MMP28-203ENST00000612672 CACNA1SQ13698 1873 aa31.86■■■□□ 2.69
MMP28-203ENST00000612672 KIF7Q2M1P5 1343 aa31.86■■■□□ 2.69
MMP28-203ENST00000612672 VSIG10Q8N0Z9 540 aa31.86■■■□□ 2.69
MMP28-203ENST00000612672 SMC1BQ8NDV3 1235 aa31.86■■■□□ 2.69
MMP28-203ENST00000612672 BICDL1Q6ZP65 573 aa31.85■■■□□ 2.69
MMP28-203ENST00000612672 TTLL6Q8N841 843 aa31.85■■■□□ 2.69
MMP28-203ENST00000612672 GLTPD2A6NH11 291 aa31.84■■■□□ 2.69
MMP28-203ENST00000612672 EIF5P55010 431 aaKnown RBP31.84■■■□□ 2.69
MMP28-203ENST00000612672 POTECB2RU33 542 aa31.82■■■□□ 2.68
MMP28-203ENST00000612672 TBC1D9BQ66K14 1250 aa31.82■■■□□ 2.68
MMP28-203ENST00000612672 CCDC24Q8N4L8 307 aa31.82■■■□□ 2.68
MMP28-203ENST00000612672 BCORQ6W2J9 1755 aa31.81■■■□□ 2.68
MMP28-203ENST00000612672 PER1O15534 1290 aaPredicted RBP31.8■■■□□ 2.68
MMP28-203ENST00000612672 DIAPH1O60610 1272 aaKnown RBP31.8■■■□□ 2.68
MMP28-203ENST00000612672 ZNF496Q96IT1 587 aaPredicted RBP31.8■■■□□ 2.68
MMP28-203ENST00000612672 SLX4Q8IY92 1834 aa31.78■■■□□ 2.68
MMP28-203ENST00000612672 H0YIN7 160 aa31.78■■■□□ 2.68
MMP28-203ENST00000612672 VEGFAP15692 232 aaPredicted RBP31.78■■■□□ 2.68
MMP28-203ENST00000612672 CC2D1BQ5T0F9 858 aaKnown RBP31.78■■■□□ 2.68
MMP28-203ENST00000612672 HEG1Q9ULI3 1381 aa31.78■■■□□ 2.68
MMP28-203ENST00000612672 ARFGEF2Q9Y6D5 1785 aa31.77■■■□□ 2.68
MMP28-203ENST00000612672 IL17REQ8NFR9 667 aa31.77■■■□□ 2.68
MMP28-203ENST00000612672 PRR5LQ6MZQ0 368 aa31.76■■■□□ 2.67
MMP28-203ENST00000612672 ZNF219Q9P2Y4 722 aaPredicted RBP31.76■■■□□ 2.67
MMP28-203ENST00000612672 TBC1D2BQ9UPU7 963 aa31.75■■■□□ 2.67
MMP28-203ENST00000612672 TTC5Q8N0Z6 440 aa31.74■■■□□ 2.67
MMP28-203ENST00000612672 C21orf2O43822 256 aa31.73■■■□□ 2.67
MMP28-203ENST00000612672 STARD3NLO95772 234 aa31.73■■■□□ 2.67
MMP28-203ENST00000612672 ZNF790Q6PG37 636 aa31.73■■■□□ 2.67
MMP28-203ENST00000612672 ZNF622Q969S3 477 aaKnown RBP eCLIP31.72■■■□□ 2.67
MMP28-203ENST00000612672 ZNF330Q9Y3S2 320 aaPredicted RBP31.71■■■□□ 2.67
MMP28-203ENST00000612672 A0A087WZG4 1122 aa31.7■■■□□ 2.67
MMP28-203ENST00000612672 KCNQ3O43525 872 aa31.7■■■□□ 2.67
MMP28-203ENST00000612672 CAPN15O75808 1086 aa31.7■■■□□ 2.67
MMP28-203ENST00000612672 A1BGP04217 495 aa31.7■■■□□ 2.67
MMP28-203ENST00000612672 BRIP1Q9BX63 1249 aa31.7■■■□□ 2.67
MMP28-203ENST00000612672 CAMTA2O94983 1202 aa31.68■■■□□ 2.66
MMP28-203ENST00000612672 HSPA1AP0DMV8 641 aaKnown RBP31.68■■■□□ 2.66
MMP28-203ENST00000612672 HSPA1BP0DMV9 641 aaKnown RBP31.68■■■□□ 2.66
MMP28-203ENST00000612672 GNAT3A8MTJ3 354 aa31.67■■■□□ 2.66
MMP28-203ENST00000612672 POTEIP0CG38 1075 aa31.67■■■□□ 2.66
MMP28-203ENST00000612672 POTEJP0CG39 1038 aa31.67■■■□□ 2.66
MMP28-203ENST00000612672 TEFQ10587 303 aa31.67■■■□□ 2.66
MMP28-203ENST00000612672 CEMIPQ8WUJ3 1361 aa31.67■■■□□ 2.66
MMP28-203ENST00000612672 U2SURPO15042 1029 aaKnown RBP31.66■■■□□ 2.66
MMP28-203ENST00000612672 IL6STP40189 918 aaPredicted RBP31.66■■■□□ 2.66
MMP28-203ENST00000612672 CNGB1Q14028 1251 aaPredicted RBP31.66■■■□□ 2.66
MMP28-203ENST00000612672 TNS4Q8IZW8 715 aa31.66■■■□□ 2.66
MMP28-203ENST00000612672 PDE6BP35913 854 aa31.65■■■□□ 2.66
MMP28-203ENST00000612672 PIP4K2AP48426 406 aaPredicted RBP31.65■■■□□ 2.66
MMP28-203ENST00000612672 ERFEQ4G0M1 354 aa31.65■■■□□ 2.66
MMP28-203ENST00000612672 GAS2L2Q8NHY3 880 aa31.63■■■□□ 2.65
MMP28-203ENST00000612672 CCER1Q8TC90 406 aaPredicted RBP31.63■■■□□ 2.65
MMP28-203ENST00000612672 PRAMEF22A3QJZ6 481 aa31.62■■■□□ 2.65
MMP28-203ENST00000612672 PHACTR3Q96KR7 559 aa31.62■■■□□ 2.65
MMP28-203ENST00000612672 FMNL2Q96PY5 1086 aa31.62■■■□□ 2.65
MMP28-203ENST00000612672 LTBP3Q9NS15 1303 aa31.62■■■□□ 2.65
MMP28-203ENST00000612672 PRPF40BQ6NWY9 871 aaKnown RBP31.61■■■□□ 2.65
MMP28-203ENST00000612672 CNBD1Q8NA66 436 aa31.61■■■□□ 2.65
MMP28-203ENST00000612672 TEX13AQ9BXU3 409 aaPredicted RBP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms