RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
PRKN-210ENST00000612540 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
PRKN-210ENST00000612540 YY1P25490 414 aa16.48■□□□□ 0.23
PRKN-210ENST00000612540 HDGFL1Q5TGJ6 251 aa16.48■□□□□ 0.23
PRKN-210ENST00000612540 BCL2L13Q9BXK5 485 aa16.48■□□□□ 0.23
PRKN-210ENST00000612540 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
PRKN-210ENST00000612540 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
PRKN-210ENST00000612540 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
PRKN-210ENST00000612540 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
PRKN-210ENST00000612540 HOXB7P09629 217 aa16.47■□□□□ 0.23
PRKN-210ENST00000612540 CACNA1FO60840 1977 aa16.46■□□□□ 0.23
PRKN-210ENST00000612540 TJP1Q07157 1748 aa16.46■□□□□ 0.23
PRKN-210ENST00000612540 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
PRKN-210ENST00000612540 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
PRKN-210ENST00000612540 STK31Q9BXU1 1019 aa16.46■□□□□ 0.23
PRKN-210ENST00000612540 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
PRKN-210ENST00000612540 LY75O60449 1722 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 SIK1P57059 783 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 SSH1Q8WYL5 1049 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 LRRC4BQ9NT99 713 aa16.45■□□□□ 0.22
PRKN-210ENST00000612540 BCAR3O75815 825 aa16.44■□□□□ 0.22
PRKN-210ENST00000612540 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
PRKN-210ENST00000612540 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
PRKN-210ENST00000612540 DNAJC10Q8IXB1 793 aa16.44■□□□□ 0.22
PRKN-210ENST00000612540 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
PRKN-210ENST00000612540 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
PRKN-210ENST00000612540 ZNF827Q17R98 1081 aa16.43■□□□□ 0.22
PRKN-210ENST00000612540 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
PRKN-210ENST00000612540 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
PRKN-210ENST00000612540 TEX13AQ9BXU3 409 aaPredicted RBP16.42■□□□□ 0.22
PRKN-210ENST00000612540 CHPF2Q9P2E5 772 aa16.42■□□□□ 0.22
PRKN-210ENST00000612540 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
PRKN-210ENST00000612540 STARD3NLO95772 234 aa16.41■□□□□ 0.22
PRKN-210ENST00000612540 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
PRKN-210ENST00000612540 FRAT1Q92837 279 aaPredicted RBP16.41■□□□□ 0.22
PRKN-210ENST00000612540 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
PRKN-210ENST00000612540 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
PRKN-210ENST00000612540 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
PRKN-210ENST00000612540 KIF16BQ96L93 1317 aa16.41■□□□□ 0.22
PRKN-210ENST00000612540 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
PRKN-210ENST00000612540 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
PRKN-210ENST00000612540 ANXA1P04083 346 aa16.4■□□□□ 0.22
PRKN-210ENST00000612540 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
PRKN-210ENST00000612540 KCNQ4P56696 695 aa16.4■□□□□ 0.22
PRKN-210ENST00000612540 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
PRKN-210ENST00000612540 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
PRKN-210ENST00000612540 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
PRKN-210ENST00000612540 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
PRKN-210ENST00000612540 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
PRKN-210ENST00000612540 MYL6BP14649 208 aa16.39■□□□□ 0.21
PRKN-210ENST00000612540 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
PRKN-210ENST00000612540 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
PRKN-210ENST00000612540 ITPK1Q13572 414 aa16.39■□□□□ 0.21
PRKN-210ENST00000612540 SYT17Q9BSW7 474 aa16.39■□□□□ 0.21
PRKN-210ENST00000612540 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
PRKN-210ENST00000612540 PLIN1O60240 522 aa16.38■□□□□ 0.21
PRKN-210ENST00000612540 A1BGP04217 495 aa16.38■□□□□ 0.21
PRKN-210ENST00000612540 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
PRKN-210ENST00000612540 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
PRKN-210ENST00000612540 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
PRKN-210ENST00000612540 ARXQ96QS3 562 aa16.37■□□□□ 0.21
PRKN-210ENST00000612540 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
PRKN-210ENST00000612540 NOB1Q9ULX3 412 aaKnown RBP16.37■□□□□ 0.21
PRKN-210ENST00000612540 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
PRKN-210ENST00000612540 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
PRKN-210ENST00000612540 IPO8O15397 1037 aaKnown RBP16.36■□□□□ 0.21
PRKN-210ENST00000612540 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
PRKN-210ENST00000612540 ZKSCAN2Q63HK3 967 aa16.36■□□□□ 0.21
PRKN-210ENST00000612540 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
PRKN-210ENST00000612540 CCDC87Q9NVE4 849 aa16.36■□□□□ 0.21
PRKN-210ENST00000612540 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
PRKN-210ENST00000612540 PNPLA7Q6ZV29 1317 aa16.36■□□□□ 0.21
PRKN-210ENST00000612540 NEFLP07196 543 aa16.35■□□□□ 0.21
PRKN-210ENST00000612540 FLIIQ13045 1269 aa16.35■□□□□ 0.21
PRKN-210ENST00000612540 G2E3Q7L622 706 aa16.35■□□□□ 0.21
PRKN-210ENST00000612540 SLC16A10Q8TF71 515 aa16.35■□□□□ 0.21
PRKN-210ENST00000612540 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
PRKN-210ENST00000612540 C4BP0C0L5 1744 aa16.34■□□□□ 0.21
PRKN-210ENST00000612540 NBPF26B4DH59 902 aa16.34■□□□□ 0.21
PRKN-210ENST00000612540 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
PRKN-210ENST00000612540 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
PRKN-210ENST00000612540 FKBP5Q13451 457 aaPredicted RBP16.34■□□□□ 0.21
PRKN-210ENST00000612540 PDIA6Q15084 440 aa16.34■□□□□ 0.21
PRKN-210ENST00000612540 NBPF10Q6P3W6 841 aaKnown RBP16.34■□□□□ 0.21
PRKN-210ENST00000612540 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
PRKN-210ENST00000612540 NBPF15Q8N660 670 aa16.34■□□□□ 0.21
PRKN-210ENST00000612540 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
PRKN-210ENST00000612540 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
PRKN-210ENST00000612540 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.2
PRKN-210ENST00000612540 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
PRKN-210ENST00000612540 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
PRKN-210ENST00000612540 PTPRCP08575 1304 aa16.32■□□□□ 0.2
PRKN-210ENST00000612540 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
PRKN-210ENST00000612540 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms