RNA–Protein interactions for RNA: ENST00000611910.4

SYNRG-216, Transcript of synergin gamma, humanhuman

TSL 1 (best)

Gene SYNRG, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-216ENST00000611910 MED1Q15648 1581 aaPredicted RBP12.43□□□□□ -0.42
SYNRG-216ENST00000611910 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
SYNRG-216ENST00000611910 NCAPD2Q15021 1401 aa12.42□□□□□ -0.42
SYNRG-216ENST00000611910 SRGAP3O43295 1099 aa12.42□□□□□ -0.42
SYNRG-216ENST00000611910 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
SYNRG-216ENST00000611910 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
SYNRG-216ENST00000611910 IL1RAPL2Q9NP60 686 aa12.42□□□□□ -0.42
SYNRG-216ENST00000611910 CHPF2Q9P2E5 772 aa12.42□□□□□ -0.42
SYNRG-216ENST00000611910 DBF4Q9UBU7 674 aaPredicted RBP12.42□□□□□ -0.42
SYNRG-216ENST00000611910 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
SYNRG-216ENST00000611910 PI4KAP2A4QPH2 592 aa12.41□□□□□ -0.42
SYNRG-216ENST00000611910 NCLP19338 710 aaKnown RBP12.41□□□□□ -0.42
SYNRG-216ENST00000611910 TRHP20396 242 aaPredicted RBP12.41□□□□□ -0.42
SYNRG-216ENST00000611910 BEND3Q5T5X7 828 aa12.41□□□□□ -0.42
SYNRG-216ENST00000611910 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
SYNRG-216ENST00000611910 PI4KAP1Q8N8J0 262 aa12.41□□□□□ -0.42
SYNRG-216ENST00000611910 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
SYNRG-216ENST00000611910 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
SYNRG-216ENST00000611910 ZGPATQ8N5A5 531 aaKnown RBP12.41□□□□□ -0.42
SYNRG-216ENST00000611910 TMX3Q96JJ7 454 aa12.41□□□□□ -0.42
SYNRG-216ENST00000611910 RNMTO43148 476 aaKnown RBP12.4□□□□□ -0.42
SYNRG-216ENST00000611910 GCP02774 474 aa12.4□□□□□ -0.42
SYNRG-216ENST00000611910 OS9Q13438 667 aaPredicted RBP12.4□□□□□ -0.42
SYNRG-216ENST00000611910 MPRIPQ6WCQ1 1025 aa12.4□□□□□ -0.42
SYNRG-216ENST00000611910 GAS2L3Q86XJ1 694 aa12.4□□□□□ -0.42
SYNRG-216ENST00000611910 INTS4Q96HW7 963 aaKnown RBP12.4□□□□□ -0.42
SYNRG-216ENST00000611910 LMBRD1Q9NUN5 540 aa12.4□□□□□ -0.42
SYNRG-216ENST00000611910 OVOS2A0A0G2JMS6 1433 aa12.4□□□□□ -0.42
SYNRG-216ENST00000611910 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
SYNRG-216ENST00000611910 CUL4AQ13619 759 aa12.39□□□□□ -0.43
SYNRG-216ENST00000611910 LRRC59Q96AG4 307 aaKnown RBP12.39□□□□□ -0.43
SYNRG-216ENST00000611910 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
SYNRG-216ENST00000611910 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
SYNRG-216ENST00000611910 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
SYNRG-216ENST00000611910 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 KIAA1211Q6ZU35 1233 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 ARHGEF25Q86VW2 580 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 C9orf78Q9NZ63 289 aaPredicted RBP12.38□□□□□ -0.43
SYNRG-216ENST00000611910 TTC41PQ6P2S7 1318 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 KCNQ3O43525 872 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 PRPF40AO75400 957 aaKnown RBP12.38□□□□□ -0.43
SYNRG-216ENST00000611910 ZNF445P59923 1031 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 ERC1Q8IUD2 1116 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 UNC5CLQ8IV45 518 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 CLASRPQ8N2M8 674 aaKnown RBP12.38□□□□□ -0.43
SYNRG-216ENST00000611910 ANKRD24Q8TF21 1146 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 GPATCH3Q96I76 525 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
SYNRG-216ENST00000611910 SLIT3O75094 1523 aa12.37□□□□□ -0.43
SYNRG-216ENST00000611910 DDX58O95786 925 aaKnown RBP12.37□□□□□ -0.43
SYNRG-216ENST00000611910 HSPA4P34932 840 aa12.37□□□□□ -0.43
SYNRG-216ENST00000611910 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
SYNRG-216ENST00000611910 CCDC173Q0VFZ6 552 aa12.37□□□□□ -0.43
SYNRG-216ENST00000611910 PKP1Q13835 747 aa12.37□□□□□ -0.43
SYNRG-216ENST00000611910 CAVIN1Q6NZI2 390 aaKnown RBP12.37□□□□□ -0.43
SYNRG-216ENST00000611910 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
SYNRG-216ENST00000611910 PI4K2BQ8TCG2 481 aa12.37□□□□□ -0.43
SYNRG-216ENST00000611910 RUFY2Q8WXA3 655 aa12.37□□□□□ -0.43
SYNRG-216ENST00000611910 PALD1Q9ULE6 856 aa12.37□□□□□ -0.43
SYNRG-216ENST00000611910 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
SYNRG-216ENST00000611910 GLRX3O76003 335 aaKnown RBP12.36□□□□□ -0.43
SYNRG-216ENST00000611910 CLCN1P35523 988 aa12.36□□□□□ -0.43
SYNRG-216ENST00000611910 MTX1Q13505 466 aa12.36□□□□□ -0.43
SYNRG-216ENST00000611910 MAP3K2Q9Y2U5 619 aa12.36□□□□□ -0.43
SYNRG-216ENST00000611910 ZDHHC9Q9Y397 364 aa12.36□□□□□ -0.43
SYNRG-216ENST00000611910 ADCY9O60503 1353 aa12.36□□□□□ -0.43
SYNRG-216ENST00000611910 SGSM2O43147 1006 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
SYNRG-216ENST00000611910 MAP4K4O95819 1239 aaPredicted RBP12.35□□□□□ -0.43
SYNRG-216ENST00000611910 MBD3O95983 291 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 ORAI2Q96SN7 254 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 USP42Q9H9J4 1324 aaKnown RBP12.35□□□□□ -0.43
SYNRG-216ENST00000611910 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 BRD1O95696 1058 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 ANXA1P04083 346 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 KRT28Q7Z3Y7 464 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
SYNRG-216ENST00000611910 RAD50Q92878 1312 aa12.34□□□□□ -0.43
SYNRG-216ENST00000611910 ESPNB1AK53 854 aa12.34□□□□□ -0.43
SYNRG-216ENST00000611910 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
SYNRG-216ENST00000611910 NOL8Q76FK4 1167 aaKnown RBP12.34□□□□□ -0.43
SYNRG-216ENST00000611910 KIF1AQ12756 1690 aa12.34□□□□□ -0.43
SYNRG-216ENST00000611910 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
SYNRG-216ENST00000611910 LINS1Q8NG48 757 aa12.33□□□□□ -0.44
SYNRG-216ENST00000611910 UPF3BQ9BZI7 483 aaKnown RBP12.33□□□□□ -0.44
SYNRG-216ENST00000611910 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
SYNRG-216ENST00000611910 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
SYNRG-216ENST00000611910 WDR33Q9C0J8 1336 aaKnown RBP12.33□□□□□ -0.44
SYNRG-216ENST00000611910 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
SYNRG-216ENST00000611910 HEG1Q9ULI3 1381 aa12.33□□□□□ -0.44
SYNRG-216ENST00000611910 FOXD4L5Q5VV16 416 aaPredicted RBP12.33□□□□□ -0.44
SYNRG-216ENST00000611910 FOXD4L4Q8WXT5 416 aaPredicted RBP12.33□□□□□ -0.44
SYNRG-216ENST00000611910 PPP1R9BQ96SB3 815 aa12.33□□□□□ -0.44
SYNRG-216ENST00000611910 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.44
SYNRG-216ENST00000611910 SIPA1L3O60292 1781 aaPredicted RBP12.32□□□□□ -0.44
SYNRG-216ENST00000611910 G3BP1Q13283 466 aaKnown RBP eCLIP12.32□□□□□ -0.44
SYNRG-216ENST00000611910 CWC27Q6UX04 472 aaKnown RBP12.32□□□□□ -0.44
SYNRG-216ENST00000611910 PROSER2Q86WR7 435 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms