RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 TAOK2Q9UL54 1235 aa14.65□□□□□ -0.06
SRRT-213ENST00000611405 SPG7Q9UQ90 795 aa14.65□□□□□ -0.06
SRRT-213ENST00000611405 ABCC6O95255 1503 aa14.65□□□□□ -0.06
SRRT-213ENST00000611405 STRCP1A6NGW2 1772 aa14.65□□□□□ -0.06
SRRT-213ENST00000611405 TNS3Q68CZ2 1445 aa14.65□□□□□ -0.06
SRRT-213ENST00000611405 HYPKQ9NX55 129 aa14.65□□□□□ -0.06
SRRT-213ENST00000611405 RGPD5Q99666 1765 aa14.65□□□□□ -0.06
SRRT-213ENST00000611405 ALDH1L1O75891 902 aa14.65□□□□□ -0.06
SRRT-213ENST00000611405 MCM4P33991 863 aa14.64□□□□□ -0.07
SRRT-213ENST00000611405 DDX17Q92841 729 aaKnown RBP14.64□□□□□ -0.07
SRRT-213ENST00000611405 HDAC5Q9UQL6 1122 aa14.64□□□□□ -0.07
SRRT-213ENST00000611405 SIPA1L3O60292 1781 aaPredicted RBP14.64□□□□□ -0.07
SRRT-213ENST00000611405 ANXA1P04083 346 aa14.64□□□□□ -0.07
SRRT-213ENST00000611405 KSR2Q6VAB6 950 aa14.64□□□□□ -0.07
SRRT-213ENST00000611405 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
SRRT-213ENST00000611405 CD2BP2O95400 341 aaKnown RBP14.63□□□□□ -0.07
SRRT-213ENST00000611405 NBPF7P0C2Y1 421 aaPredicted RBP14.63□□□□□ -0.07
SRRT-213ENST00000611405 COL18A1P39060 1754 aa14.63□□□□□ -0.07
SRRT-213ENST00000611405 SRGAP3O43295 1099 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 SURF6O75683 361 aaKnown RBP14.62□□□□□ -0.07
SRRT-213ENST00000611405 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
SRRT-213ENST00000611405 PHKG2P15735 406 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 HSP90AB4PQ58FF6 505 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 SPATA31A3Q5VYP0 1347 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 CSB-PGBD3P0DP91 1061 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 SLC52A2Q9HAB3 445 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 DDX21Q9NR30 783 aaKnown RBP eCLIP14.62□□□□□ -0.07
SRRT-213ENST00000611405 MAP3K2Q9Y2U5 619 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 IFNL2Q8IZJ0 200 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 KIF1BPQ96EK5 621 aa14.62□□□□□ -0.07
SRRT-213ENST00000611405 DDX58O95786 925 aaKnown RBP14.61□□□□□ -0.07
SRRT-213ENST00000611405 PROSER3Q2NL68 480 aa14.61□□□□□ -0.07
SRRT-213ENST00000611405 CPDO75976 1380 aa14.61□□□□□ -0.07
SRRT-213ENST00000611405 MTX1Q13505 466 aa14.61□□□□□ -0.07
SRRT-213ENST00000611405 TSHZ3Q63HK5 1081 aa14.61□□□□□ -0.07
SRRT-213ENST00000611405 ZNF790Q6PG37 636 aa14.61□□□□□ -0.07
SRRT-213ENST00000611405 RHPN1Q8TCX5 695 aa14.61□□□□□ -0.07
SRRT-213ENST00000611405 KDM6AO15550 1401 aaPredicted RBP14.61□□□□□ -0.07
SRRT-213ENST00000611405 ESYT1Q9BSJ8 1104 aa14.6□□□□□ -0.07
SRRT-213ENST00000611405 CABLES1Q8TDN4 633 aa14.6□□□□□ -0.07
SRRT-213ENST00000611405 MEGF6O75095 1541 aa14.6□□□□□ -0.07
SRRT-213ENST00000611405 PRAMEF22A3QJZ6 481 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
SRRT-213ENST00000611405 DDX11L8A8MPP1 907 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 TRIM6-TRIM34B2RNG4 842 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 CHMLP26374 656 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 LINS1Q8NG48 757 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 ST18O60284 1047 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 RAB3GAP1Q15042 981 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 RILPL2Q969X0 211 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 DCAF5Q96JK2 942 aa14.59□□□□□ -0.07
SRRT-213ENST00000611405 SCN11AQ9UI33 1791 aa14.58□□□□□ -0.07
SRRT-213ENST00000611405 TUBGCP6Q96RT7 1819 aa14.58□□□□□ -0.07
SRRT-213ENST00000611405 CRYBG1Q9Y4K1 1723 aa14.58□□□□□ -0.08
SRRT-213ENST00000611405 HSPA2P54652 639 aa14.58□□□□□ -0.08
SRRT-213ENST00000611405 PDIA6Q15084 440 aa14.58□□□□□ -0.08
SRRT-213ENST00000611405 CHRNA2Q15822 529 aa14.58□□□□□ -0.08
SRRT-213ENST00000611405 MCCP23508 829 aa14.57□□□□□ -0.08
SRRT-213ENST00000611405 NUTM1Q86Y26 1132 aa14.57□□□□□ -0.08
SRRT-213ENST00000611405 NFATC2IPQ8NCF5 419 aa14.57□□□□□ -0.08
SRRT-213ENST00000611405 SLC39A6Q13433 755 aa14.57□□□□□ -0.08
SRRT-213ENST00000611405 TNPO1Q92973 898 aaKnown RBP14.57□□□□□ -0.08
SRRT-213ENST00000611405 GBP4Q96PP9 640 aa14.57□□□□□ -0.08
SRRT-213ENST00000611405 UTYO14607 1347 aa14.57□□□□□ -0.08
SRRT-213ENST00000611405 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
SRRT-213ENST00000611405 PODXL2Q9NZ53 605 aa14.56□□□□□ -0.08
SRRT-213ENST00000611405 MRC1P22897 1456 aa14.56□□□□□ -0.08
SRRT-213ENST00000611405 LARP1Q6PKG0 1096 aaKnown RBP14.56□□□□□ -0.08
SRRT-213ENST00000611405 BRINP3Q76B58 766 aa14.56□□□□□ -0.08
SRRT-213ENST00000611405 ERC1Q8IUD2 1116 aa14.56□□□□□ -0.08
SRRT-213ENST00000611405 USP42Q9H9J4 1324 aaKnown RBP14.55□□□□□ -0.08
SRRT-213ENST00000611405 GRM8O00222 908 aa14.55□□□□□ -0.08
SRRT-213ENST00000611405 PI4K2BQ8TCG2 481 aa14.55□□□□□ -0.08
SRRT-213ENST00000611405 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
SRRT-213ENST00000611405 CYP27B1O15528 508 aa14.55□□□□□ -0.08
SRRT-213ENST00000611405 PTMSP20962 102 aa14.55□□□□□ -0.08
SRRT-213ENST00000611405 OS9Q13438 667 aaPredicted RBP14.55□□□□□ -0.08
SRRT-213ENST00000611405 CWF19L2Q2TBE0 894 aaKnown RBP14.55□□□□□ -0.08
SRRT-213ENST00000611405 SNRPA1P09661 255 aaKnown RBP14.55□□□□□ -0.08
SRRT-213ENST00000611405 ANAPC15P60006 121 aa14.55□□□□□ -0.08
SRRT-213ENST00000611405 RIC3Q7Z5B4 369 aa14.55□□□□□ -0.08
SRRT-213ENST00000611405 TTC5Q8N0Z6 440 aa14.55□□□□□ -0.08
SRRT-213ENST00000611405 TTC41PQ6P2S7 1318 aa14.54□□□□□ -0.08
SRRT-213ENST00000611405 TRAK2O60296 914 aa14.54□□□□□ -0.08
SRRT-213ENST00000611405 AIMP1Q12904 312 aaKnown RBP14.54□□□□□ -0.08
SRRT-213ENST00000611405 UNC5CLQ8IV45 518 aa14.54□□□□□ -0.08
SRRT-213ENST00000611405 PKD1L3Q7Z443 1732 aa14.54□□□□□ -0.08
SRRT-213ENST00000611405 ZNF496Q96IT1 587 aaPredicted RBP14.54□□□□□ -0.08
SRRT-213ENST00000611405 FMNL2Q96PY5 1086 aa14.54□□□□□ -0.08
SRRT-213ENST00000611405 NEXNQ0ZGT2 675 aa14.53□□□□□ -0.08
SRRT-213ENST00000611405 CLASRPQ8N2M8 674 aaKnown RBP14.53□□□□□ -0.08
SRRT-213ENST00000611405 IL17RAQ96F46 866 aa14.53□□□□□ -0.08
SRRT-213ENST00000611405 CWC22Q9HCG8 908 aaKnown RBP14.53□□□□□ -0.08
SRRT-213ENST00000611405 CNTROBQ8N137 903 aa14.53□□□□□ -0.08
SRRT-213ENST00000611405 ANO2Q9NQ90 1003 aa14.53□□□□□ -0.08
SRRT-213ENST00000611405 MCM2P49736 904 aa14.52□□□□□ -0.08
SRRT-213ENST00000611405 CABP4P57796 275 aa14.52□□□□□ -0.08
SRRT-213ENST00000611405 IL27Q8NEV9 243 aa14.52□□□□□ -0.08
SRRT-213ENST00000611405 XAGE3Q8WTP9 111 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms