RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PPP1R42Q7Z4L9 355 aa16.8■□□□□ 0.28
NEK3-205ENST00000610828 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
NEK3-205ENST00000610828 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
NEK3-205ENST00000610828 SSH3Q8TE77 659 aa16.79■□□□□ 0.28
NEK3-205ENST00000610828 SNX21Q969T3 373 aa16.79■□□□□ 0.28
NEK3-205ENST00000610828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■■□ 22.1
NEK3-205ENST00000610828 MAP3K2Q9Y2U5 619 aa16.79■□□□□ 0.28
NEK3-205ENST00000610828 SCN11AQ9UI33 1791 aa16.78■□□□□ 0.28
NEK3-205ENST00000610828 SRGAP3O43295 1099 aa16.78■□□□□ 0.28
NEK3-205ENST00000610828 MX1P20591 662 aa16.78■□□□□ 0.28
NEK3-205ENST00000610828 CPDO75976 1380 aa16.78■□□□□ 0.28
NEK3-205ENST00000610828 HYPKQ9NX55 129 aa16.78■□□□□ 0.28
NEK3-205ENST00000610828 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.28
NEK3-205ENST00000610828 ABCC6O95255 1503 aa16.77■□□□□ 0.28
NEK3-205ENST00000610828 KSR2Q6VAB6 950 aa16.77■□□□□ 0.28
NEK3-205ENST00000610828 ZNF335Q9H4Z2 1342 aaPredicted RBP16.77■□□□□ 0.27
NEK3-205ENST00000610828 STRCQ7RTU9 1775 aa16.77■□□□□ 0.27
NEK3-205ENST00000610828 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.27
NEK3-205ENST00000610828 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.27
NEK3-205ENST00000610828 CYP27B1O15528 508 aa16.76■□□□□ 0.27
NEK3-205ENST00000610828 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
NEK3-205ENST00000610828 POLA2Q14181 598 aa16.76■□□□□ 0.27
NEK3-205ENST00000610828 USP26Q9BXU7 913 aa16.76■□□□□ 0.27
NEK3-205ENST00000610828 IL1RAPL2Q9NP60 686 aa16.76■□□□□ 0.27
NEK3-205ENST00000610828 SLAIN2Q9P270 581 aa16.76■□□□□ 0.27
NEK3-205ENST00000610828 KDM4FA0A1W2PPD8 638 aa16.75■□□□□ 0.27
NEK3-205ENST00000610828 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
NEK3-205ENST00000610828 DCAF5Q96JK2 942 aa16.75■□□□□ 0.27
NEK3-205ENST00000610828 PRDM11Q9NQV5 511 aa16.75■□□□□ 0.27
NEK3-205ENST00000610828 DDX21Q9NR30 783 aaKnown RBP eCLIP16.75■□□□□ 0.27
NEK3-205ENST00000610828 C9orf78Q9NZ63 289 aaPredicted RBP16.75■□□□□ 0.27
NEK3-205ENST00000610828 CD2BP2O95400 341 aaKnown RBP16.74■□□□□ 0.27
NEK3-205ENST00000610828 DDX58O95786 925 aaKnown RBP16.74■□□□□ 0.27
NEK3-205ENST00000610828 CWF19L2Q2TBE0 894 aaKnown RBP16.74■□□□□ 0.27
NEK3-205ENST00000610828 RAB11FIP3O75154 756 aa16.74■□□□□ 0.27
NEK3-205ENST00000610828 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
NEK3-205ENST00000610828 TTC5Q8N0Z6 440 aa16.74■□□□□ 0.27
NEK3-205ENST00000610828 CHMP5Q9NZZ3 219 aa16.74■□□□□ 0.27
NEK3-205ENST00000610828 REC8O95072 547 aa16.73■□□□□ 0.27
NEK3-205ENST00000610828 PDIA6Q15084 440 aa16.73■□□□□ 0.27
NEK3-205ENST00000610828 ZNF496Q96IT1 587 aaPredicted RBP16.73■□□□□ 0.27
NEK3-205ENST00000610828 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
NEK3-205ENST00000610828 ERC2O15083 957 aa16.73■□□□□ 0.27
NEK3-205ENST00000610828 MYL6BP14649 208 aa16.73■□□□□ 0.27
NEK3-205ENST00000610828 PLEKHG2Q9H7P9 1386 aa16.73■□□□□ 0.27
NEK3-205ENST00000610828 TOM1L2Q6ZVM7 507 aa16.72■□□□□ 0.27
NEK3-205ENST00000610828 RHPN1Q8TCX5 695 aa16.72■□□□□ 0.27
NEK3-205ENST00000610828 RILPL2Q969X0 211 aa16.72■□□□□ 0.27
NEK3-205ENST00000610828 STAP2Q9UGK3 403 aa16.72■□□□□ 0.27
NEK3-205ENST00000610828 SOS2Q07890 1332 aaPredicted RBP16.72■□□□□ 0.27
NEK3-205ENST00000610828 C5P01031 1676 aa16.72■□□□□ 0.27
NEK3-205ENST00000610828 GSE1Q14687 1217 aa16.72■□□□□ 0.27
NEK3-205ENST00000610828 NUTM1Q86Y26 1132 aa16.72■□□□□ 0.27
NEK3-205ENST00000610828 PKD1L3Q7Z443 1732 aa16.72■□□□□ 0.27
NEK3-205ENST00000610828 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.27
NEK3-205ENST00000610828 HSP90AA1P07900 732 aaKnown RBP16.71■□□□□ 0.27
NEK3-205ENST00000610828 CABP4P57796 275 aa16.71■□□□□ 0.27
NEK3-205ENST00000610828 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
NEK3-205ENST00000610828 KIF1BPQ96EK5 621 aa16.71■□□□□ 0.27
NEK3-205ENST00000610828 RABEP1Q15276 862 aa16.71■□□□□ 0.26
NEK3-205ENST00000610828 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.26
NEK3-205ENST00000610828 WDR17Q8IZU2 1322 aa16.71■□□□□ 0.26
NEK3-205ENST00000610828 MRC1P22897 1456 aa16.7■□□□□ 0.26
NEK3-205ENST00000610828 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
NEK3-205ENST00000610828 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
NEK3-205ENST00000610828 OS9Q13438 667 aaPredicted RBP16.7■□□□□ 0.26
NEK3-205ENST00000610828 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
NEK3-205ENST00000610828 GRM8O00222 908 aa16.69■□□□□ 0.26
NEK3-205ENST00000610828 MTX1Q13505 466 aa16.69■□□□□ 0.26
NEK3-205ENST00000610828 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
NEK3-205ENST00000610828 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
NEK3-205ENST00000610828 USP16Q9Y5T5 823 aa16.69■□□□□ 0.26
NEK3-205ENST00000610828 AOX1Q06278 1338 aa16.69■□□□□ 0.26
NEK3-205ENST00000610828 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
NEK3-205ENST00000610828 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
NEK3-205ENST00000610828 COPS6Q7L5N1 327 aa16.68■□□□□ 0.26
NEK3-205ENST00000610828 UNC5CLQ8IV45 518 aa16.68■□□□□ 0.26
NEK3-205ENST00000610828 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
NEK3-205ENST00000610828 NEXNQ0ZGT2 675 aa16.67■□□□□ 0.26
NEK3-205ENST00000610828 LARP1Q6PKG0 1096 aaKnown RBP16.67■□□□□ 0.26
NEK3-205ENST00000610828 COL5A2P05997 1499 aaPredicted RBP16.67■□□□□ 0.26
NEK3-205ENST00000610828 PCDH11XQ9BZA7 1347 aa16.67■□□□□ 0.26
NEK3-205ENST00000610828 PCDH11YQ9BZA8 1340 aa16.67■□□□□ 0.26
NEK3-205ENST00000610828 IGKV5-2P06315 115 aa16.67■□□□□ 0.26
NEK3-205ENST00000610828 CHMLP26374 656 aa16.67■□□□□ 0.26
NEK3-205ENST00000610828 DDIT3P35638 169 aa16.67■□□□□ 0.26
NEK3-205ENST00000610828 ZCRB1Q8TBF4 217 aaKnown RBP16.67■□□□□ 0.26
NEK3-205ENST00000610828 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
NEK3-205ENST00000610828 SUCLG2Q96I99 432 aa16.66■□□□□ 0.26
NEK3-205ENST00000610828 STRN4Q9NRL3 753 aa16.66■□□□□ 0.26
NEK3-205ENST00000610828 PA2G4Q9UQ80 394 aaKnown RBP16.66■□□□□ 0.26
NEK3-205ENST00000610828 PARP4Q9UKK3 1724 aaKnown RBP16.66■□□□□ 0.26
NEK3-205ENST00000610828 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
NEK3-205ENST00000610828 PI4K2BQ8TCG2 481 aa16.65■□□□□ 0.26
NEK3-205ENST00000610828 MYD88Q99836 296 aa16.65■□□□□ 0.26
NEK3-205ENST00000610828 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
NEK3-205ENST00000610828 UTYO14607 1347 aa16.65■□□□□ 0.26
NEK3-205ENST00000610828 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
NEK3-205ENST00000610828 NEURL1BA8MQ27 555 aa16.64■□□□□ 0.25
NEK3-205ENST00000610828 MCM4P33991 863 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms