RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 TUBGCP6Q96RT7 1819 aa34.63■■■■□ 3.13
CSPG5-205ENST00000610462 PRAMEF22A3QJZ6 481 aa34.61■■■■□ 3.13
CSPG5-205ENST00000610462 FRAT2O75474 233 aaPredicted RBP34.61■■■■□ 3.13
CSPG5-205ENST00000610462 HYPKQ9NX55 129 aa34.61■■■■□ 3.13
CSPG5-205ENST00000610462 PROSER3Q2NL68 480 aa34.6■■■■□ 3.13
CSPG5-205ENST00000610462 CASC1Q6TDU7 716 aa34.6■■■■□ 3.13
CSPG5-205ENST00000610462 POLA2Q14181 598 aa34.59■■■■□ 3.13
CSPG5-205ENST00000610462 ZNF790Q6PG37 636 aa34.59■■■■□ 3.13
CSPG5-205ENST00000610462 C5P01031 1676 aa34.59■■■■□ 3.13
CSPG5-205ENST00000610462 MRC1P22897 1456 aa34.58■■■■□ 3.13
CSPG5-205ENST00000610462 KDM4FA0A1W2PPD8 638 aa34.58■■■■□ 3.13
CSPG5-205ENST00000610462 NBPF7P0C2Y1 421 aaPredicted RBP34.58■■■■□ 3.13
CSPG5-205ENST00000610462 KSR2Q6VAB6 950 aa34.58■■■■□ 3.13
CSPG5-205ENST00000610462 PPP1R42Q7Z4L9 355 aa34.58■■■■□ 3.13
CSPG5-205ENST00000610462 MAP3K2Q9Y2U5 619 aa34.57■■■■□ 3.12
CSPG5-205ENST00000610462 ALDH1L1O75891 902 aa34.56■■■■□ 3.12
CSPG5-205ENST00000610462 DDX21Q9NR30 783 aaKnown RBP eCLIP34.56■■■■□ 3.12
CSPG5-205ENST00000610462 SOS2Q07890 1332 aaPredicted RBP34.55■■■■□ 3.12
CSPG5-205ENST00000610462 RAB11FIP3O75154 756 aa34.55■■■■□ 3.12
CSPG5-205ENST00000610462 SLC39A6Q13433 755 aa34.55■■■■□ 3.12
CSPG5-205ENST00000610462 NFATC2IPQ8NCF5 419 aa34.55■■■■□ 3.12
CSPG5-205ENST00000610462 DCAF5Q96JK2 942 aa34.55■■■■□ 3.12
CSPG5-205ENST00000610462 SLAIN2Q9P270 581 aa34.55■■■■□ 3.12
CSPG5-205ENST00000610462 MX1P20591 662 aa34.54■■■■□ 3.12
CSPG5-205ENST00000610462 SPRYD3Q8NCJ5 442 aa34.54■■■■□ 3.12
CSPG5-205ENST00000610462 ZNF335Q9H4Z2 1342 aaPredicted RBP34.54■■■■□ 3.12
CSPG5-205ENST00000610462 CYP27B1O15528 508 aa34.53■■■■□ 3.12
CSPG5-205ENST00000610462 STAP2Q9UGK3 403 aa34.53■■■■□ 3.12
CSPG5-205ENST00000610462 USP26Q9BXU7 913 aa34.53■■■■□ 3.12
CSPG5-205ENST00000610462 HSP90AB1P08238 724 aaKnown RBP34.52■■■■□ 3.12
CSPG5-205ENST00000610462 PARP4Q9UKK3 1724 aaKnown RBP34.52■■■■□ 3.12
CSPG5-205ENST00000610462 SRGAP3O43295 1099 aa34.51■■■■□ 3.12
CSPG5-205ENST00000610462 PDIA6Q15084 440 aa34.51■■■■□ 3.12
CSPG5-205ENST00000610462 DDX58O95786 925 aaKnown RBP34.51■■■■□ 3.11
CSPG5-205ENST00000610462 SURF6O75683 361 aaKnown RBP34.5■■■■□ 3.11
CSPG5-205ENST00000610462 ABCA3Q99758 1704 aa34.49■■■■□ 3.11
CSPG5-205ENST00000610462 CHMP5Q9NZZ3 219 aa34.48■■■■□ 3.11
CSPG5-205ENST00000610462 AOX1Q06278 1338 aa34.48■■■■□ 3.11
CSPG5-205ENST00000610462 PRDM11Q9NQV5 511 aa34.48■■■■□ 3.11
CSPG5-205ENST00000610462 HDAC5Q9UQL6 1122 aa34.48■■■■□ 3.11
CSPG5-205ENST00000610462 WDR17Q8IZU2 1322 aa34.47■■■■□ 3.11
CSPG5-205ENST00000610462 MTX1Q13505 466 aa34.46■■■■□ 3.11
CSPG5-205ENST00000610462 TSHZ3Q63HK5 1081 aa34.46■■■■□ 3.11
CSPG5-205ENST00000610462 C9orf78Q9NZ63 289 aaPredicted RBP34.46■■■■□ 3.11
CSPG5-205ENST00000610462 REC8O95072 547 aa34.46■■■■□ 3.11
CSPG5-205ENST00000610462 LINS1Q8NG48 757 aa34.46■■■■□ 3.11
CSPG5-205ENST00000610462 ZNF496Q96IT1 587 aaPredicted RBP34.46■■■■□ 3.11
CSPG5-205ENST00000610462 ERC2O15083 957 aa34.45■■■■□ 3.11
CSPG5-205ENST00000610462 RHPN1Q8TCX5 695 aa34.45■■■■□ 3.1
CSPG5-205ENST00000610462 HSP90AB4PQ58FF6 505 aa34.44■■■■□ 3.1
CSPG5-205ENST00000610462 TTC5Q8N0Z6 440 aa34.44■■■■□ 3.1
CSPG5-205ENST00000610462 KIF1BPQ96EK5 621 aa34.44■■■■□ 3.1
CSPG5-205ENST00000610462 RBM42Q9BTD8 480 aaKnown RBP34.44■■■■□ 3.1
CSPG5-205ENST00000610462 IL1RAPL2Q9NP60 686 aa34.44■■■■□ 3.1
CSPG5-205ENST00000610462 RABEP1Q15276 862 aa34.43■■■■□ 3.1
CSPG5-205ENST00000610462 CWF19L2Q2TBE0 894 aaKnown RBP34.43■■■■□ 3.1
CSPG5-205ENST00000610462 COL5A2P05997 1499 aaPredicted RBP34.42■■■■□ 3.1
CSPG5-205ENST00000610462 AIMP1Q12904 312 aaKnown RBP34.42■■■■□ 3.1
CSPG5-205ENST00000610462 SNRPA1P09661 255 aaKnown RBP34.42■■■■□ 3.1
CSPG5-205ENST00000610462 CD2BP2O95400 341 aaKnown RBP34.41■■■■□ 3.1
CSPG5-205ENST00000610462 CABP4P57796 275 aa34.41■■■■□ 3.1
CSPG5-205ENST00000610462 UTYO14607 1347 aa34.41■■■■□ 3.1
CSPG5-205ENST00000610462 K7ELQ4 463 aaPredicted RBP34.4■■■■□ 3.1
CSPG5-205ENST00000610462 DDIT3P35638 169 aa34.4■■■■□ 3.1
CSPG5-205ENST00000610462 TOM1L2Q6ZVM7 507 aa34.4■■■■□ 3.1
CSPG5-205ENST00000610462 FMNL2Q96PY5 1086 aa34.4■■■■□ 3.1
CSPG5-205ENST00000610462 NHSL1Q5SYE7 1610 aa34.4■■■■□ 3.1
CSPG5-205ENST00000610462 LARP1Q6PKG0 1096 aaKnown RBP34.39■■■■□ 3.1
CSPG5-205ENST00000610462 GRM8O00222 908 aa34.39■■■■□ 3.1
CSPG5-205ENST00000610462 RIC3Q7Z5B4 369 aa34.39■■■■□ 3.1
CSPG5-205ENST00000610462 LAMB4A4D0S4 1761 aa34.38■■■■□ 3.09
CSPG5-205ENST00000610462 NUTM1Q86Y26 1132 aa34.38■■■■□ 3.09
CSPG5-205ENST00000610462 AK9Q5TCS8 1911 aa34.37■■■■□ 3.09
CSPG5-205ENST00000610462 TRIM6-TRIM34B2RNG4 842 aa34.37■■■■□ 3.09
CSPG5-205ENST00000610462 MYL6BP14649 208 aa34.37■■■■□ 3.09
CSPG5-205ENST00000610462 GSE1Q14687 1217 aa34.37■■■■□ 3.09
CSPG5-205ENST00000610462 PCDH11XQ9BZA7 1347 aa34.37■■■■□ 3.09
CSPG5-205ENST00000610462 PCDH11YQ9BZA8 1340 aa34.37■■■■□ 3.09
CSPG5-205ENST00000610462 ZCRB1Q8TBF4 217 aaKnown RBP34.37■■■■□ 3.09
CSPG5-205ENST00000610462 XAGE3Q8WTP9 111 aa34.36■■■■□ 3.09
CSPG5-205ENST00000610462 RILPL2Q969X0 211 aa34.36■■■■□ 3.09
CSPG5-205ENST00000610462 GLI3P10071 1580 aa34.36■■■■□ 3.09
CSPG5-205ENST00000610462 ESYT1Q9BSJ8 1104 aa34.35■■■■□ 3.09
CSPG5-205ENST00000610462 USP16Q9Y5T5 823 aa34.35■■■■□ 3.09
CSPG5-205ENST00000610462 CHMLP26374 656 aa34.34■■■■□ 3.09
CSPG5-205ENST00000610462 COPS6Q7L5N1 327 aa34.34■■■■□ 3.09
CSPG5-205ENST00000610462 IGKV5-2P06315 115 aa34.34■■■■□ 3.09
CSPG5-205ENST00000610462 LRP10Q7Z4F1 713 aa34.34■■■■□ 3.09
CSPG5-205ENST00000610462 CIZ1Q9ULV3 898 aaPredicted RBP34.34■■■■□ 3.09
CSPG5-205ENST00000610462 NEXNQ0ZGT2 675 aa34.33■■■■□ 3.09
CSPG5-205ENST00000610462 CARD10Q9BWT7 1032 aa34.33■■■■□ 3.09
CSPG5-205ENST00000610462 SUCLG2Q96I99 432 aa34.32■■■■□ 3.09
CSPG5-205ENST00000610462 METTL22Q9BUU2 404 aaPredicted RBP34.32■■■■□ 3.08
CSPG5-205ENST00000610462 OS9Q13438 667 aaPredicted RBP34.31■■■■□ 3.08
CSPG5-205ENST00000610462 UNC5CLQ8IV45 518 aa34.31■■■■□ 3.08
CSPG5-205ENST00000610462 PI4K2BQ8TCG2 481 aa34.31■■■■□ 3.08
CSPG5-205ENST00000610462 SHANK3Q9BYB0 1731 aa34.31■■■■□ 3.08
CSPG5-205ENST00000610462 KAZALD1Q96I82 304 aa34.31■■■■□ 3.08
CSPG5-205ENST00000610462 NEURL1BA8MQ27 555 aa34.3■■■■□ 3.08
CSPG5-205ENST00000610462 UBR2Q8IWV8 1755 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms