RNA–Protein interactions for RNA: ENST00000610189.1

GPN1-211, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPN1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-211ENST00000610189 NGLY1Q96IV0 654 aa17.25■□□□□ 0.35
GPN1-211ENST00000610189 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
GPN1-211ENST00000610189 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
GPN1-211ENST00000610189 PROSER3Q2NL68 480 aa17.25■□□□□ 0.35
GPN1-211ENST00000610189 BARGINQ6ZT62 677 aa17.25■□□□□ 0.35
GPN1-211ENST00000610189 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
GPN1-211ENST00000610189 DDX21Q9NR30 783 aaKnown RBP eCLIP17.23■□□□□ 0.35
GPN1-211ENST00000610189 VPS72Q15906 364 aa17.23■□□□□ 0.35
GPN1-211ENST00000610189 DDB1Q16531 1140 aa17.23■□□□□ 0.35
GPN1-211ENST00000610189 FNBP4Q8N3X1 1017 aaPredicted RBP17.23■□□□□ 0.35
GPN1-211ENST00000610189 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
GPN1-211ENST00000610189 ADCY9O60503 1353 aa17.22■□□□□ 0.35
GPN1-211ENST00000610189 MEIS3Q99687 375 aa17.22■□□□□ 0.35
GPN1-211ENST00000610189 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
GPN1-211ENST00000610189 BCL9O00512 1426 aa17.21■□□□□ 0.35
GPN1-211ENST00000610189 PDIA6Q15084 440 aa17.21■□□□□ 0.35
GPN1-211ENST00000610189 USP16Q9Y5T5 823 aa17.21■□□□□ 0.35
GPN1-211ENST00000610189 ARFGEF2Q9Y6D5 1785 aa17.21■□□□□ 0.35
GPN1-211ENST00000610189 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
GPN1-211ENST00000610189 PIGBQ92521 554 aa17.2■□□□□ 0.34
GPN1-211ENST00000610189 MEX3CQ5U5Q3 659 aaKnown RBP17.2■□□□□ 0.34
GPN1-211ENST00000610189 DNAAF4Q8WXU2 420 aa17.2■□□□□ 0.34
GPN1-211ENST00000610189 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
GPN1-211ENST00000610189 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
GPN1-211ENST00000610189 USP21Q9UK80 565 aa17.19■□□□□ 0.34
GPN1-211ENST00000610189 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
GPN1-211ENST00000610189 TJP1Q07157 1748 aa17.18■□□□□ 0.34
GPN1-211ENST00000610189 NUP188Q5SRE5 1749 aa17.18■□□□□ 0.34
GPN1-211ENST00000610189 PTCD1O75127 700 aaKnown RBP17.17■□□□□ 0.34
GPN1-211ENST00000610189 MYL6BP14649 208 aa17.17■□□□□ 0.34
GPN1-211ENST00000610189 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
GPN1-211ENST00000610189 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
GPN1-211ENST00000610189 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
GPN1-211ENST00000610189 PDZRN3Q9UPQ7 1066 aa17.17■□□□□ 0.34
GPN1-211ENST00000610189 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
GPN1-211ENST00000610189 RGS3P49796 1198 aa17.17■□□□□ 0.34
GPN1-211ENST00000610189 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
GPN1-211ENST00000610189 MARCH10Q8NA82 808 aaPredicted RBP17.17■□□□□ 0.34
GPN1-211ENST00000610189 SRCIN1Q9C0H9 1055 aa17.17■□□□□ 0.34
GPN1-211ENST00000610189 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
GPN1-211ENST00000610189 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
GPN1-211ENST00000610189 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
GPN1-211ENST00000610189 DDX58O95786 925 aaKnown RBP17.15■□□□□ 0.34
GPN1-211ENST00000610189 GNAI3P08754 354 aa17.15■□□□□ 0.34
GPN1-211ENST00000610189 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
GPN1-211ENST00000610189 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
GPN1-211ENST00000610189 BEND3Q5T5X7 828 aa17.15■□□□□ 0.34
GPN1-211ENST00000610189 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
GPN1-211ENST00000610189 LRP10Q7Z4F1 713 aa17.15■□□□□ 0.34
GPN1-211ENST00000610189 ANKRD44Q8N8A2 993 aa17.15■□□□□ 0.34
GPN1-211ENST00000610189 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
GPN1-211ENST00000610189 AFF2P51816 1311 aa17.15■□□□□ 0.34
GPN1-211ENST00000610189 PRIM1P49642 420 aaKnown RBP17.15■□□□□ 0.34
GPN1-211ENST00000610189 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
GPN1-211ENST00000610189 GNAI2P04899 355 aa17.13■□□□□ 0.33
GPN1-211ENST00000610189 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
GPN1-211ENST00000610189 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
GPN1-211ENST00000610189 USP44Q9H0E7 712 aa17.13■□□□□ 0.33
GPN1-211ENST00000610189 ATRNO75882 1429 aa17.13■□□□□ 0.33
GPN1-211ENST00000610189 CICQ96RK0 1608 aaPredicted RBP17.13■□□□□ 0.33
GPN1-211ENST00000610189 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
GPN1-211ENST00000610189 GCC1Q96CN9 775 aa17.12■□□□□ 0.33
GPN1-211ENST00000610189 NBPF26B4DH59 902 aa17.12■□□□□ 0.33
GPN1-211ENST00000610189 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
GPN1-211ENST00000610189 NBPF14Q5TI25 921 aa17.12■□□□□ 0.33
GPN1-211ENST00000610189 NBPF10Q6P3W6 841 aaKnown RBP17.12■□□□□ 0.33
GPN1-211ENST00000610189 NBPF15Q8N660 670 aa17.12■□□□□ 0.33
GPN1-211ENST00000610189 ACSBG1Q96GR2 724 aa17.12■□□□□ 0.33
GPN1-211ENST00000610189 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
GPN1-211ENST00000610189 ALDH1L1O75891 902 aa17.11■□□□□ 0.33
GPN1-211ENST00000610189 A1BGP04217 495 aa17.11■□□□□ 0.33
GPN1-211ENST00000610189 RIC3Q7Z5B4 369 aa17.11■□□□□ 0.33
GPN1-211ENST00000610189 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
GPN1-211ENST00000610189 A0A0G2JS52 829 aa17.1■□□□□ 0.33
GPN1-211ENST00000610189 MYT1Q01538 1121 aa17.1■□□□□ 0.33
GPN1-211ENST00000610189 DNAJC10Q8IXB1 793 aa17.1■□□□□ 0.33
GPN1-211ENST00000610189 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
GPN1-211ENST00000610189 NUCB1Q02818 461 aa17.1■□□□□ 0.33
GPN1-211ENST00000610189 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
GPN1-211ENST00000610189 LINS1Q8NG48 757 aa17.09■□□□□ 0.33
GPN1-211ENST00000610189 SBF2Q86WG5 1849 aa17.09■□□□□ 0.33
GPN1-211ENST00000610189 BTAF1O14981 1849 aa17.08■□□□□ 0.33
GPN1-211ENST00000610189 HMMRO75330 724 aa17.08■□□□□ 0.33
GPN1-211ENST00000610189 CWF19L2Q2TBE0 894 aaKnown RBP17.08■□□□□ 0.33
GPN1-211ENST00000610189 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.33
GPN1-211ENST00000610189 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.33
GPN1-211ENST00000610189 SLC4A9Q96Q91 983 aa17.08■□□□□ 0.33
GPN1-211ENST00000610189 METTL22Q9BUU2 404 aaPredicted RBP17.08■□□□□ 0.33
GPN1-211ENST00000610189 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.32
GPN1-211ENST00000610189 RREB1Q92766 1687 aa17.08■□□□□ 0.32
GPN1-211ENST00000610189 PDE4AP27815 886 aa17.07■□□□□ 0.32
GPN1-211ENST00000610189 DCTPP1Q9H773 170 aa17.07■□□□□ 0.32
GPN1-211ENST00000610189 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
GPN1-211ENST00000610189 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
GPN1-211ENST00000610189 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
GPN1-211ENST00000610189 NEXNQ0ZGT2 675 aa17.07■□□□□ 0.32
GPN1-211ENST00000610189 CHD1LQ86WJ1 897 aa17.07■□□□□ 0.32
GPN1-211ENST00000610189 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
GPN1-211ENST00000610189 MYD88Q99836 296 aa17.07■□□□□ 0.32
GPN1-211ENST00000610189 TRPC5Q9UL62 973 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms