RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.61■■■□□ 2.17
COMMD7-204ENST00000610160 HSPA1LP34931 641 aa28.61■■■□□ 2.17
COMMD7-204ENST00000610160 CCDC9Q9Y3X0 531 aaKnown RBP28.61■■■□□ 2.17
COMMD7-204ENST00000610160 PROSER3Q2NL68 480 aa28.6■■■□□ 2.17
COMMD7-204ENST00000610160 DDX21Q9NR30 783 aaKnown RBP eCLIP28.6■■■□□ 2.17
COMMD7-204ENST00000610160 HYPKQ9NX55 129 aa28.6■■■□□ 2.17
COMMD7-204ENST00000610160 DOT1LQ8TEK3 1739 aa28.58■■■□□ 2.17
COMMD7-204ENST00000610160 FNBP4Q8N3X1 1017 aaPredicted RBP28.58■■■□□ 2.17
COMMD7-204ENST00000610160 PDIA6Q15084 440 aa28.57■■■□□ 2.16
COMMD7-204ENST00000610160 DDB1Q16531 1140 aa28.57■■■□□ 2.16
COMMD7-204ENST00000610160 MEIS3Q99687 375 aa28.57■■■□□ 2.16
COMMD7-204ENST00000610160 VPS72Q15906 364 aa28.57■■■□□ 2.16
COMMD7-204ENST00000610160 ATP10DQ9P241 1426 aa28.56■■■□□ 2.16
COMMD7-204ENST00000610160 ADCY9O60503 1353 aa28.56■■■□□ 2.16
COMMD7-204ENST00000610160 USP16Q9Y5T5 823 aa28.55■■■□□ 2.16
COMMD7-204ENST00000610160 PI4KAP2A4QPH2 592 aa28.54■■■□□ 2.16
COMMD7-204ENST00000610160 PI4KAP1Q8N8J0 262 aa28.54■■■□□ 2.16
COMMD7-204ENST00000610160 DNAAF4Q8WXU2 420 aa28.54■■■□□ 2.16
COMMD7-204ENST00000610160 BCL9O00512 1426 aa28.53■■■□□ 2.16
COMMD7-204ENST00000610160 SMC5Q8IY18 1101 aa28.53■■■□□ 2.16
COMMD7-204ENST00000610160 PIGBQ92521 554 aa28.53■■■□□ 2.16
COMMD7-204ENST00000610160 SIRT2Q8IXJ6 389 aa28.52■■■□□ 2.16
COMMD7-204ENST00000610160 PDZRN3Q9UPQ7 1066 aa28.51■■■□□ 2.15
COMMD7-204ENST00000610160 PTCD1O75127 700 aaKnown RBP28.5■■■□□ 2.15
COMMD7-204ENST00000610160 SRCIN1Q9C0H9 1055 aa28.5■■■□□ 2.15
COMMD7-204ENST00000610160 RGS3P49796 1198 aa28.5■■■□□ 2.15
COMMD7-204ENST00000610160 KSR2Q6VAB6 950 aa28.5■■■□□ 2.15
COMMD7-204ENST00000610160 USP21Q9UK80 565 aa28.5■■■□□ 2.15
COMMD7-204ENST00000610160 ERBB4Q15303 1308 aa28.49■■■□□ 2.15
COMMD7-204ENST00000610160 DDX58O95786 925 aaKnown RBP28.49■■■□□ 2.15
COMMD7-204ENST00000610160 GNAI3P08754 354 aa28.49■■■□□ 2.15
COMMD7-204ENST00000610160 MYL6BP14649 208 aa28.49■■■□□ 2.15
COMMD7-204ENST00000610160 BEND3Q5T5X7 828 aa28.48■■■□□ 2.15
COMMD7-204ENST00000610160 LRP10Q7Z4F1 713 aa28.48■■■□□ 2.15
COMMD7-204ENST00000610160 RPAP2Q8IXW5 612 aaPredicted RBP28.48■■■□□ 2.15
COMMD7-204ENST00000610160 ANKRD44Q8N8A2 993 aa28.48■■■□□ 2.15
COMMD7-204ENST00000610160 ASAP1Q9ULH1 1129 aa28.48■■■□□ 2.15
COMMD7-204ENST00000610160 KAT6BQ8WYB5 2073 aa28.48■■■□□ 2.15
COMMD7-204ENST00000610160 MEX3CQ5U5Q3 659 aaKnown RBP28.48■■■□□ 2.15
COMMD7-204ENST00000610160 CEP85Q6P2H3 762 aa28.48■■■□□ 2.15
COMMD7-204ENST00000610160 MAP3K2Q9Y2U5 619 aa28.48■■■□□ 2.15
COMMD7-204ENST00000610160 FAM98CQ17RN3 349 aaKnown RBP28.47■■■□□ 2.15
COMMD7-204ENST00000610160 MARCH10Q8NA82 808 aaPredicted RBP28.47■■■□□ 2.15
COMMD7-204ENST00000610160 ATG3Q9NT62 314 aa28.47■■■□□ 2.15
COMMD7-204ENST00000610160 GNAI2P04899 355 aa28.46■■■□□ 2.15
COMMD7-204ENST00000610160 GCC1Q96CN9 775 aa28.46■■■□□ 2.15
COMMD7-204ENST00000610160 AIMP1Q12904 312 aaKnown RBP28.45■■■□□ 2.14
COMMD7-204ENST00000610160 XAGE3Q8WTP9 111 aa28.45■■■□□ 2.14
COMMD7-204ENST00000610160 USP44Q9H0E7 712 aa28.45■■■□□ 2.14
COMMD7-204ENST00000610160 SYTL4Q96C24 671 aaPredicted RBP28.44■■■□□ 2.14
COMMD7-204ENST00000610160 THSD7AQ9UPZ6 1657 aa28.44■■■□□ 2.14
COMMD7-204ENST00000610160 VSIG10Q8N0Z9 540 aa28.44■■■□□ 2.14
COMMD7-204ENST00000610160 PIP4K2AP48426 406 aaPredicted RBP28.43■■■□□ 2.14
COMMD7-204ENST00000610160 PRIM1P49642 420 aaKnown RBP28.43■■■□□ 2.14
COMMD7-204ENST00000610160 COPS6Q7L5N1 327 aa28.43■■■□□ 2.14
COMMD7-204ENST00000610160 ARFGEF2Q9Y6D5 1785 aa28.42■■■□□ 2.14
COMMD7-204ENST00000610160 ALDH1L1O75891 902 aa28.41■■■□□ 2.14
COMMD7-204ENST00000610160 NBPF26B4DH59 902 aa28.41■■■□□ 2.14
COMMD7-204ENST00000610160 UBTFL1P0CB47 393 aaPredicted RBP28.41■■■□□ 2.14
COMMD7-204ENST00000610160 NUCB1Q02818 461 aa28.41■■■□□ 2.14
COMMD7-204ENST00000610160 NBPF14Q5TI25 921 aa28.41■■■□□ 2.14
COMMD7-204ENST00000610160 NBPF10Q6P3W6 841 aaKnown RBP28.41■■■□□ 2.14
COMMD7-204ENST00000610160 NBPF15Q8N660 670 aa28.41■■■□□ 2.14
COMMD7-204ENST00000610160 RIC3Q7Z5B4 369 aa28.4■■■□□ 2.14
COMMD7-204ENST00000610160 TEX13AQ9BXU3 409 aaPredicted RBP28.39■■■□□ 2.14
COMMD7-204ENST00000610160 AFF2P51816 1311 aa28.39■■■□□ 2.14
COMMD7-204ENST00000610160 LINS1Q8NG48 757 aa28.39■■■□□ 2.13
COMMD7-204ENST00000610160 RBM19Q9Y4C8 960 aaKnown RBP28.39■■■□□ 2.13
COMMD7-204ENST00000610160 RBM42Q9BTD8 480 aaKnown RBP28.38■■■□□ 2.13
COMMD7-204ENST00000610160 DCTPP1Q9H773 170 aa28.38■■■□□ 2.13
COMMD7-204ENST00000610160 LRRFIP2Q9Y608 721 aaKnown RBP28.38■■■□□ 2.13
COMMD7-204ENST00000610160 HMMRO75330 724 aa28.37■■■□□ 2.13
COMMD7-204ENST00000610160 ANKRD13DQ6ZTN6 518 aa28.37■■■□□ 2.13
COMMD7-204ENST00000610160 IBTKQ9P2D0 1353 aaPredicted RBP28.37■■■□□ 2.13
COMMD7-204ENST00000610160 TJP1Q07157 1748 aa28.37■■■□□ 2.13
COMMD7-204ENST00000610160 A1BGP04217 495 aa28.37■■■□□ 2.13
COMMD7-204ENST00000610160 NUP188Q5SRE5 1749 aa28.36■■■□□ 2.13
COMMD7-204ENST00000610160 CHD1LQ86WJ1 897 aa28.36■■■□□ 2.13
COMMD7-204ENST00000610160 DNAJC10Q8IXB1 793 aa28.36■■■□□ 2.13
COMMD7-204ENST00000610160 ACSBG1Q96GR2 724 aa28.36■■■□□ 2.13
COMMD7-204ENST00000610160 PDE4AP27815 886 aa28.35■■■□□ 2.13
COMMD7-204ENST00000610160 ATRNO75882 1429 aa28.35■■■□□ 2.13
COMMD7-204ENST00000610160 NBPF7P0C2Y1 421 aaPredicted RBP28.35■■■□□ 2.13
COMMD7-204ENST00000610160 CWF19L2Q2TBE0 894 aaKnown RBP28.35■■■□□ 2.13
COMMD7-204ENST00000610160 METTL22Q9BUU2 404 aaPredicted RBP28.35■■■□□ 2.13
COMMD7-204ENST00000610160 NEXNQ0ZGT2 675 aa28.34■■■□□ 2.13
COMMD7-204ENST00000610160 A0A0G2JS52 829 aa28.33■■■□□ 2.13
COMMD7-204ENST00000610160 MYT1Q01538 1121 aa28.33■■■□□ 2.13
COMMD7-204ENST00000610160 GJD4Q96KN9 370 aaPredicted RBP28.33■■■□□ 2.13
COMMD7-204ENST00000610160 AFDNP55196 1824 aaKnown RBP28.33■■■□□ 2.13
COMMD7-204ENST00000610160 ANKRD45Q5TZF3 282 aa28.33■■■□□ 2.13
COMMD7-204ENST00000610160 PLBD2Q8NHP8 589 aa28.33■■■□□ 2.13
COMMD7-204ENST00000610160 SLC4A9Q96Q91 983 aa28.33■■■□□ 2.13
COMMD7-204ENST00000610160 BACH2Q9BYV9 841 aa28.33■■■□□ 2.13
COMMD7-204ENST00000610160 STARD3NLO95772 234 aa28.32■■■□□ 2.12
COMMD7-204ENST00000610160 IGKV5-2P06315 115 aa28.32■■■□□ 2.12
COMMD7-204ENST00000610160 LNPKQ9C0E8 428 aa28.32■■■□□ 2.12
COMMD7-204ENST00000610160 ATP8B2P98198 1209 aa28.31■■■□□ 2.12
COMMD7-204ENST00000610160 CICQ96RK0 1608 aaPredicted RBP28.31■■■□□ 2.12
COMMD7-204ENST00000610160 C9orf78Q9NZ63 289 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms