RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
SGMS1-209ENST00000609445 TTC5Q8N0Z6 440 aa21.48■■□□□ 1.03
SGMS1-209ENST00000609445 VSIG10Q8N0Z9 540 aa21.48■■□□□ 1.03
SGMS1-209ENST00000609445 RSPH6AQ9H0K4 717 aa21.48■■□□□ 1.03
SGMS1-209ENST00000609445 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
SGMS1-209ENST00000609445 KCNA3P22001 575 aa21.47■■□□□ 1.03
SGMS1-209ENST00000609445 TM4SF1P30408 202 aa21.47■■□□□ 1.03
SGMS1-209ENST00000609445 AFDNP55196 1824 aaKnown RBP21.47■■□□□ 1.03
SGMS1-209ENST00000609445 FCHSD2O94868 740 aa21.46■■□□□ 1.03
SGMS1-209ENST00000609445 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
SGMS1-209ENST00000609445 ZNF496Q96IT1 587 aaPredicted RBP21.46■■□□□ 1.03
SGMS1-209ENST00000609445 ZNF790Q6PG37 636 aa21.45■■□□□ 1.02
SGMS1-209ENST00000609445 GPBP1L1Q9HC44 474 aaPredicted RBP21.45■■□□□ 1.02
SGMS1-209ENST00000609445 NARFQ9UHQ1 456 aa21.45■■□□□ 1.02
SGMS1-209ENST00000609445 ARFGEF1Q9Y6D6 1849 aa21.45■■□□□ 1.02
SGMS1-209ENST00000609445 U2AF1L5P0DN76 240 aaPredicted RBP21.44■■□□□ 1.02
SGMS1-209ENST00000609445 U2AF1Q01081 240 aaKnown RBP eCLIP21.44■■□□□ 1.02
SGMS1-209ENST00000609445 BCL2L12Q9HB09 334 aa21.44■■□□□ 1.02
SGMS1-209ENST00000609445 NUDCQ9Y266 331 aa21.44■■□□□ 1.02
SGMS1-209ENST00000609445 CEMIPQ8WUJ3 1361 aa21.44■■□□□ 1.02
SGMS1-209ENST00000609445 HEG1Q9ULI3 1381 aa21.44■■□□□ 1.02
SGMS1-209ENST00000609445 CHRNA5P30532 468 aa21.43■■□□□ 1.02
SGMS1-209ENST00000609445 NFIXQ14938 502 aa21.43■■□□□ 1.02
SGMS1-209ENST00000609445 ARHGAP27Q6ZUM4 889 aa21.43■■□□□ 1.02
SGMS1-209ENST00000609445 KCNQ3O43525 872 aa21.42■■□□□ 1.02
SGMS1-209ENST00000609445 STARD3NLO95772 234 aa21.42■■□□□ 1.02
SGMS1-209ENST00000609445 NRXN2Q9P2S2 1712 aa21.41■■□□□ 1.02
SGMS1-209ENST00000609445 PIM2Q9P1W9 311 aa21.41■■□□□ 1.02
SGMS1-209ENST00000609445 EIF5P55010 431 aaKnown RBP21.4■■□□□ 1.02
SGMS1-209ENST00000609445 BTBD11A6QL63 1104 aa21.39■■□□□ 1.01
SGMS1-209ENST00000609445 FMNL2Q96PY5 1086 aa21.39■■□□□ 1.01
SGMS1-209ENST00000609445 SERPINB2P05120 415 aa21.38■■□□□ 1.01
SGMS1-209ENST00000609445 DALRD3Q5D0E6 543 aaKnown RBP21.38■■□□□ 1.01
SGMS1-209ENST00000609445 MCM10Q7L590 875 aa21.38■■□□□ 1.01
SGMS1-209ENST00000609445 ZNF330Q9Y3S2 320 aaPredicted RBP21.38■■□□□ 1.01
SGMS1-209ENST00000609445 SCN7AQ01118 1682 aa21.37■■□□□ 1.01
SGMS1-209ENST00000609445 A1BGP04217 495 aa21.37■■□□□ 1.01
SGMS1-209ENST00000609445 DCTN1Q14203 1278 aa21.37■■□□□ 1.01
SGMS1-209ENST00000609445 BICDL1Q6ZP65 573 aa21.37■■□□□ 1.01
SGMS1-209ENST00000609445 TEX13AQ9BXU3 409 aaPredicted RBP21.37■■□□□ 1.01
SGMS1-209ENST00000609445 A0A087WZG4 1122 aa21.36■■□□□ 1.01
SGMS1-209ENST00000609445 TBC1D2BQ9UPU7 963 aa21.36■■□□□ 1.01
SGMS1-209ENST00000609445 CARMIL3Q8ND23 1372 aa21.36■■□□□ 1.01
SGMS1-209ENST00000609445 RTF1Q92541 710 aaKnown RBP21.35■■□□□ 1.01
SGMS1-209ENST00000609445 DLEC1Q9Y238 1755 aa21.35■■□□□ 1.01
SGMS1-209ENST00000609445 DLG5Q8TDM6 1919 aa21.34■■□□□ 1.01
SGMS1-209ENST00000609445 PRAMEF22A3QJZ6 481 aa21.34■■□□□ 1.01
SGMS1-209ENST00000609445 KIF3CO14782 793 aa21.34■■□□□ 1.01
SGMS1-209ENST00000609445 TBC1D9BQ66K14 1250 aa21.34■■□□□ 1.01
SGMS1-209ENST00000609445 SBF1O95248 1867 aa21.33■■□□□ 1.01
SGMS1-209ENST00000609445 ANKRD31Q8N7Z5 1873 aa21.33■■□□□ 1.01
SGMS1-209ENST00000609445 IL6STP40189 918 aaPredicted RBP21.33■■□□□ 1.01
SGMS1-209ENST00000609445 PIP4K2AP48426 406 aaPredicted RBP21.33■■□□□ 1.01
SGMS1-209ENST00000609445 C9orf131Q5VYM1 1079 aa21.33■■□□□ 1.01
SGMS1-209ENST00000609445 USP16Q9Y5T5 823 aa21.33■■□□□ 1.01
SGMS1-209ENST00000609445 BCORQ6W2J9 1755 aa21.31■■□□□ 1
SGMS1-209ENST00000609445 C2CD5Q86YS7 1000 aa21.3■■□□□ 1
SGMS1-209ENST00000609445 CCDC24Q8N4L8 307 aa21.3■■□□□ 1
SGMS1-209ENST00000609445 CEP350Q5VT06 3117 aa21.3■■□□□ 1
SGMS1-209ENST00000609445 CAMTA2O94983 1202 aa21.29■■□□□ 1
SGMS1-209ENST00000609445 RNF181Q9P0P0 153 aa21.29■■□□□ 1
SGMS1-209ENST00000609445 HTATSF1O43719 755 aaKnown RBP21.28■■□□□ 1
SGMS1-209ENST00000609445 RASSF7Q02833 373 aa21.28■■□□□ 1
SGMS1-209ENST00000609445 DZIP3Q86Y13 1208 aaKnown RBP21.28■■□□□ 1
SGMS1-209ENST00000609445 NMRK2Q9NPI5 230 aa21.28■■□□□ 1
SGMS1-209ENST00000609445 MIS18AQ9NYP9 233 aa21.28■■□□□ 1
SGMS1-209ENST00000609445 COL11A2P13942 1736 aaPredicted RBP21.28■■□□□ 1
SGMS1-209ENST00000609445 SNRPA1P09661 255 aaKnown RBP21.27■■□□□ 1
SGMS1-209ENST00000609445 PRR5LQ6MZQ0 368 aa21.27■■□□□ 1
SGMS1-209ENST00000609445 NPM2Q86SE8 214 aaKnown RBP21.27■■□□□ 1
SGMS1-209ENST00000609445 H0YIN7 160 aa21.26■□□□□ 0.99
SGMS1-209ENST00000609445 TAF7Q15545 349 aaPredicted RBP21.26■□□□□ 0.99
SGMS1-209ENST00000609445 TTLL6Q8N841 843 aa21.26■□□□□ 0.99
SGMS1-209ENST00000609445 HSPA6P17066 643 aa21.25■□□□□ 0.99
SGMS1-209ENST00000609445 CCDC88AQ3V6T2 1871 aa21.25■□□□□ 0.99
SGMS1-209ENST00000609445 PLEKHF1Q96S99 279 aa21.25■□□□□ 0.99
SGMS1-209ENST00000609445 KDM3BQ7LBC6 1761 aa21.24■□□□□ 0.99
SGMS1-209ENST00000609445 NBPF26B4DH59 902 aa21.24■□□□□ 0.99
SGMS1-209ENST00000609445 NEFMP07197 916 aa21.24■□□□□ 0.99
SGMS1-209ENST00000609445 NBPF10Q6P3W6 841 aaKnown RBP21.24■□□□□ 0.99
SGMS1-209ENST00000609445 NBPF15Q8N660 670 aa21.24■□□□□ 0.99
SGMS1-209ENST00000609445 SETDB2Q96T68 719 aa21.24■□□□□ 0.99
SGMS1-209ENST00000609445 LAMB4A4D0S4 1761 aa21.23■□□□□ 0.99
SGMS1-209ENST00000609445 PRELPP51888 382 aa21.23■□□□□ 0.99
SGMS1-209ENST00000609445 ZNF622Q969S3 477 aaKnown RBP eCLIP21.23■□□□□ 0.998e-8■■■■□ 21.4
SGMS1-209ENST00000609445 BRIP1Q9BX63 1249 aa21.23■□□□□ 0.99
SGMS1-209ENST00000609445 CACNA1SQ13698 1873 aa21.23■□□□□ 0.99
SGMS1-209ENST00000609445 NFE2L2Q16236 605 aa21.22■□□□□ 0.99
SGMS1-209ENST00000609445 THUMPD2Q9BTF0 503 aaKnown RBP21.22■□□□□ 0.99
SGMS1-209ENST00000609445 PDE6BP35913 854 aa21.21■□□□□ 0.99
SGMS1-209ENST00000609445 CNBD1Q8NA66 436 aa21.21■□□□□ 0.99
SGMS1-209ENST00000609445 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
SGMS1-209ENST00000609445 NFKBIEO00221 500 aa21.19■□□□□ 0.98
SGMS1-209ENST00000609445 NPHP1O15259 732 aa21.19■□□□□ 0.98
SGMS1-209ENST00000609445 TOMM70O94826 608 aa21.19■□□□□ 0.98
SGMS1-209ENST00000609445 TIAM2Q8IVF5 1701 aa21.18■□□□□ 0.98
SGMS1-209ENST00000609445 SLX4Q8IY92 1834 aa21.18■□□□□ 0.98
SGMS1-209ENST00000609445 LMNB1P20700 586 aa21.18■□□□□ 0.98
SGMS1-209ENST00000609445 CLEC4GQ6UXB4 293 aa21.18■□□□□ 0.98
SGMS1-209ENST00000609445 MAPK8IP3Q9UPT6 1336 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms