RNA–Protein interactions for RNA: ENST00000609429.5

LINC00635-222, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 743 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-222	ENST00000609429	IER5L	Q5T953	404 aa		11.73	□□□□□ -0.53
LINC00635-222	ENST00000609429	KDM3B	Q7LBC6	1761 aa		11.73	□□□□□ -0.53
LINC00635-222	ENST00000609429	KAT6B	Q8WYB5	2073 aa		11.73	□□□□□ -0.53
LINC00635-222	ENST00000609429	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
LINC00635-222	ENST00000609429	ACSBG1	Q96GR2	724 aa		11.73	□□□□□ -0.53
LINC00635-222	ENST00000609429	PALLD	Q8WX93	1383 aa		11.72	□□□□□ -0.53
LINC00635-222	ENST00000609429	IL16	Q14005	1332 aa		11.72	□□□□□ -0.53
LINC00635-222	ENST00000609429	APBA3	O96018	575 aa		11.72	□□□□□ -0.53
LINC00635-222	ENST00000609429	SLC27A3	Q5K4L6	730 aa		11.72	□□□□□ -0.53
LINC00635-222	ENST00000609429	TTC5	Q8N0Z6	440 aa		11.72	□□□□□ -0.53
LINC00635-222	ENST00000609429	IL17RE	Q8NFR9	667 aa		11.72	□□□□□ -0.53
LINC00635-222	ENST00000609429	TRIM35	Q9UPQ4	493 aa		11.72	□□□□□ -0.53
LINC00635-222	ENST00000609429	SOCS7	O14512	581 aa		11.71	□□□□□ -0.53
LINC00635-222	ENST00000609429	TAF7	Q15545	349 aa	Predicted RBP	11.71	□□□□□ -0.53
LINC00635-222	ENST00000609429	PIGB	Q92521	554 aa		11.71	□□□□□ -0.53
LINC00635-222	ENST00000609429	LGR6	Q9HBX8	967 aa		11.71	□□□□□ -0.53
LINC00635-222	ENST00000609429	KCNQ2	O43526	872 aa		11.7	□□□□□ -0.54
LINC00635-222	ENST00000609429	ST18	O60284	1047 aa		11.7	□□□□□ -0.54
LINC00635-222	ENST00000609429	GNAI1	P63096	354 aa		11.7	□□□□□ -0.54
LINC00635-222	ENST00000609429	NEUROD2	Q15784	382 aa		11.7	□□□□□ -0.54
LINC00635-222	ENST00000609429	MCM10	Q7L590	875 aa		11.7	□□□□□ -0.54
LINC00635-222	ENST00000609429	WDR63	Q8IWG1	891 aa		11.7	□□□□□ -0.54
LINC00635-222	ENST00000609429	NFATC2IP	Q8NCF5	419 aa		11.7	□□□□□ -0.54
LINC00635-222	ENST00000609429	C5	P01031	1676 aa		11.7	□□□□□ -0.54
LINC00635-222	ENST00000609429	BTBD11	A6QL63	1104 aa		11.69	□□□□□ -0.54
LINC00635-222	ENST00000609429	VSIG10	Q8N0Z9	540 aa		11.69	□□□□□ -0.54
LINC00635-222	ENST00000609429	CHMP4A	Q9BY43	222 aa		11.69	□□□□□ -0.54
LINC00635-222	ENST00000609429	IFT57	Q9NWB7	429 aa		11.69	□□□□□ -0.54
LINC00635-222	ENST00000609429	RRP7A	Q9Y3A4	280 aa	Known RBP	11.69	□□□□□ -0.54
LINC00635-222	ENST00000609429	KCP	Q6ZWJ8	1503 aa		11.69	□□□□□ -0.54
LINC00635-222	ENST00000609429	LAMB4	A4D0S4	1761 aa		11.69	□□□□□ -0.54
LINC00635-222	ENST00000609429	NUP188	Q5SRE5	1749 aa		11.69	□□□□□ -0.54
LINC00635-222	ENST00000609429	SOS1	Q07889	1333 aa	Predicted RBP	11.68	□□□□□ -0.54
LINC00635-222	ENST00000609429	ZNF790	Q6PG37	636 aa		11.68	□□□□□ -0.54
LINC00635-222	ENST00000609429	WWC1	Q8IX03	1113 aa		11.68	□□□□□ -0.54
LINC00635-222	ENST00000609429	CFAP44	Q96MT7	982 aa		11.68	□□□□□ -0.54
LINC00635-222	ENST00000609429	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.68	□□□□□ -0.54
LINC00635-222	ENST00000609429	COL5A3	P25940	1745 aa	Predicted RBP	11.67	□□□□□ -0.54
LINC00635-222	ENST00000609429	DCTN1	Q14203	1278 aa		11.67	□□□□□ -0.54
LINC00635-222	ENST00000609429	SLAIN1	Q8ND83	568 aa		11.67	□□□□□ -0.54
LINC00635-222	ENST00000609429	FMNL2	Q96PY5	1086 aa		11.67	□□□□□ -0.54
LINC00635-222	ENST00000609429	SGIP1	Q9BQI5	828 aa		11.67	□□□□□ -0.54
LINC00635-222	ENST00000609429	ATG3	Q9NT62	314 aa		11.67	□□□□□ -0.54
LINC00635-222	ENST00000609429	TSPYL4	Q9UJ04	414 aa		11.67	□□□□□ -0.54
LINC00635-222	ENST00000609429	TAF1L	Q8IZX4	1826 aa		11.67	□□□□□ -0.54
LINC00635-222	ENST00000609429	TJP1	Q07157	1748 aa		11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	QSER1	Q2KHR3	1735 aa		11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	LOC102724428	A0A0B4J2F2	783 aa		11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	SIK1	P57059	783 aa		11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	TXNRD1	Q16881	649 aa		11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	CAMKK2	Q96RR4	588 aa		11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	MYH16	Q9H6N6	1097 aa		11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	CCNL1	Q9UK58	526 aa	Predicted RBP	11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	HEG1	Q9ULI3	1381 aa		11.66	□□□□□ -0.54
LINC00635-222	ENST00000609429	CHL1	O00533	1208 aa		11.65	□□□□□ -0.54
LINC00635-222	ENST00000609429	HOXB7	P09629	217 aa		11.65	□□□□□ -0.54
LINC00635-222	ENST00000609429	ASAP1	Q9ULH1	1129 aa		11.65	□□□□□ -0.54
LINC00635-222	ENST00000609429	PCDHB13	Q9Y5F0	798 aa		11.65	□□□□□ -0.54
LINC00635-222	ENST00000609429	ZBED9	Q6R2W3	1325 aa		11.64	□□□□□ -0.55
LINC00635-222	ENST00000609429	ZNF521	Q96K83	1311 aa		11.64	□□□□□ -0.55
LINC00635-222	ENST00000609429	C4B	P0C0L5	1744 aa		11.64	□□□□□ -0.55
LINC00635-222	ENST00000609429	ZNF853	P0CG23	659 aa		11.64	□□□□□ -0.55
LINC00635-222	ENST00000609429	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
LINC00635-222	ENST00000609429	EN1	Q05925	392 aa	Predicted RBP	11.64	□□□□□ -0.55
LINC00635-222	ENST00000609429	GOLGA2	Q08379	1002 aa		11.64	□□□□□ -0.55
LINC00635-222	ENST00000609429	NBPF14	Q5TI25	921 aa		11.64	□□□□□ -0.55
LINC00635-222	ENST00000609429		E9PSI1	815 aa		11.63	□□□□□ -0.55
LINC00635-222	ENST00000609429	STARD3NL	O95772	234 aa		11.63	□□□□□ -0.55
LINC00635-222	ENST00000609429	SNRPA1	P09661	255 aa	Known RBP	11.63	□□□□□ -0.55
LINC00635-222	ENST00000609429	ATP6V1A	P38606	617 aa		11.63	□□□□□ -0.55
LINC00635-222	ENST00000609429	PTF1A	Q7RTS3	328 aa		11.63	□□□□□ -0.55
LINC00635-222	ENST00000609429	THUMPD2	Q9BTF0	503 aa	Known RBP	11.63	□□□□□ -0.55
LINC00635-222	ENST00000609429	ERBB4	Q15303	1308 aa		11.62	□□□□□ -0.55
LINC00635-222	ENST00000609429	CNTNAP4	Q9C0A0	1308 aa		11.62	□□□□□ -0.55
LINC00635-222	ENST00000609429	PTCD1	O75127	700 aa	Known RBP	11.62	□□□□□ -0.55
LINC00635-222	ENST00000609429	EZH2	Q15910	746 aa	Known RBP	11.62	□□□□□ -0.55
LINC00635-222	ENST00000609429	RC3H1	Q5TC82	1133 aa	Known RBP	11.62	□□□□□ -0.55
LINC00635-222	ENST00000609429	DEFB132	Q7Z7B7	95 aa		11.62	□□□□□ -0.55
LINC00635-222	ENST00000609429	EIF4A1	P60842	406 aa	Known RBP	11.61	□□□□□ -0.55
LINC00635-222	ENST00000609429	SLC39A6	Q13433	755 aa		11.61	□□□□□ -0.55
LINC00635-222	ENST00000609429	IFNL1	Q8IU54	200 aa		11.61	□□□□□ -0.55
LINC00635-222	ENST00000609429	FLAD1	Q8NFF5	587 aa		11.61	□□□□□ -0.55
LINC00635-222	ENST00000609429	ZNF496	Q96IT1	587 aa	Predicted RBP	11.61	□□□□□ -0.55
LINC00635-222	ENST00000609429	MBIP	Q9NS73	344 aa		11.61	□□□□□ -0.55
LINC00635-222	ENST00000609429	STK32B	Q9NY57	414 aa		11.61	□□□□□ -0.55
LINC00635-222	ENST00000609429	LAS1L	Q9Y4W2	734 aa	Known RBP	11.61	□□□□□ -0.55
LINC00635-222	ENST00000609429	AK7	Q96M32	723 aa		11.6	□□□□□ -0.55
LINC00635-222	ENST00000609429	FANCI	Q9NVI1	1328 aa		11.6	□□□□□ -0.55
LINC00635-222	ENST00000609429	GIGYF1	O75420	1035 aa	Predicted RBP	11.59	□□□□□ -0.55
LINC00635-222	ENST00000609429	CT47B1	P0C2W7	299 aa	Predicted RBP	11.59	□□□□□ -0.55
LINC00635-222	ENST00000609429	NPM2	Q86SE8	214 aa	Known RBP	11.59	□□□□□ -0.55
LINC00635-222	ENST00000609429	ZNF428	Q96B54	188 aa		11.59	□□□□□ -0.55
LINC00635-222	ENST00000609429	SALL2	Q9Y467	1007 aa	Predicted RBP	11.59	□□□□□ -0.55
LINC00635-222	ENST00000609429	UBR3	Q6ZT12	1888 aa		11.59	□□□□□ -0.55
LINC00635-222	ENST00000609429	SSFA2	P28290	1259 aa		11.58	□□□□□ -0.56
LINC00635-222	ENST00000609429	NUBP1	P53384	320 aa		11.58	□□□□□ -0.56
LINC00635-222	ENST00000609429	MMRN1	Q13201	1228 aa		11.58	□□□□□ -0.56
LINC00635-222	ENST00000609429	LRRC4B	Q9NT99	713 aa		11.58	□□□□□ -0.56
LINC00635-222	ENST00000609429	CCDC87	Q9NVE4	849 aa		11.58	□□□□□ -0.56
LINC00635-222	ENST00000609429	CYP19A1	P11511	503 aa	Predicted RBP	11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms