RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 TMX3Q96JJ7 454 aa16.94■□□□□ 0.3
LINC02538-201ENST00000609107 NUP62CLQ9H1M0 184 aa16.94■□□□□ 0.3
LINC02538-201ENST00000609107 ZSCAN25Q6NSZ9 544 aa16.94■□□□□ 0.3
LINC02538-201ENST00000609107 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
LINC02538-201ENST00000609107 TBX22Q9Y458 520 aa16.94■□□□□ 0.3
LINC02538-201ENST00000609107 CCDC183Q5T5S1 534 aa16.94■□□□□ 0.3
LINC02538-201ENST00000609107 FBXW7Q969H0 707 aa16.94■□□□□ 0.3
LINC02538-201ENST00000609107 NOL10Q9BSC4 688 aaKnown RBP16.94■□□□□ 0.3
LINC02538-201ENST00000609107 CCDC8Q9H0W5 538 aaPredicted RBP16.94■□□□□ 0.3
LINC02538-201ENST00000609107 TULP1O00294 542 aaPredicted RBP16.93■□□□□ 0.3
LINC02538-201ENST00000609107 ALDH1L1O75891 902 aa16.93■□□□□ 0.3
LINC02538-201ENST00000609107 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
LINC02538-201ENST00000609107 CEBPZQ03701 1054 aaKnown RBP16.92■□□□□ 0.3
LINC02538-201ENST00000609107 MAP3K5Q99683 1374 aa16.92■□□□□ 0.3
LINC02538-201ENST00000609107 OLFM4Q6UX06 510 aa16.92■□□□□ 0.3
LINC02538-201ENST00000609107 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
LINC02538-201ENST00000609107 AKAP4Q5JQC9 854 aa16.92■□□□□ 0.3
LINC02538-201ENST00000609107 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
LINC02538-201ENST00000609107 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
LINC02538-201ENST00000609107 XBP1P17861 261 aa16.92■□□□□ 0.3
LINC02538-201ENST00000609107 TSR1Q2NL82 804 aaKnown RBP16.92■□□□□ 0.3
LINC02538-201ENST00000609107 KIF24Q5T7B8 1368 aa16.92■□□□□ 0.3
LINC02538-201ENST00000609107 FKBP4Q02790 459 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC02538-201ENST00000609107 HOMER1Q86YM7 354 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 JMYQ8N9B5 988 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 ANKRD20A12PQ8NF67 263 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 XRCC6P12956 609 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC02538-201ENST00000609107 SCAND2PQ9GZW5 306 aaPredicted RBP16.91■□□□□ 0.3
LINC02538-201ENST00000609107 BABAM1Q9NWV8 329 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 SBNO1A3KN83 1393 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
LINC02538-201ENST00000609107 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 MSH6P52701 1360 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 MAP3K11Q16584 847 aa16.91■□□□□ 0.3
LINC02538-201ENST00000609107 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
LINC02538-201ENST00000609107 ME1P48163 572 aa16.9■□□□□ 0.3
LINC02538-201ENST00000609107 USP26Q9BXU7 913 aa16.9■□□□□ 0.3
LINC02538-201ENST00000609107 CLTCL1P53675 1640 aa16.9■□□□□ 0.3
LINC02538-201ENST00000609107 MAP3K4Q9Y6R4 1608 aa16.9■□□□□ 0.3
LINC02538-201ENST00000609107 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
LINC02538-201ENST00000609107 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
LINC02538-201ENST00000609107 CDC42BPBQ9Y5S2 1711 aa16.9■□□□□ 0.3
LINC02538-201ENST00000609107 STX6O43752 255 aa16.89■□□□□ 0.29
LINC02538-201ENST00000609107 ANXA1P04083 346 aa16.89■□□□□ 0.29
LINC02538-201ENST00000609107 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
LINC02538-201ENST00000609107 FERMT3Q86UX7 667 aa16.89■□□□□ 0.29
LINC02538-201ENST00000609107 SPC24Q8NBT2 197 aa16.89■□□□□ 0.29
LINC02538-201ENST00000609107 BRMS1Q9HCU9 246 aa16.89■□□□□ 0.29
LINC02538-201ENST00000609107 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
LINC02538-201ENST00000609107 YEATS2Q9ULM3 1422 aa16.89■□□□□ 0.29
LINC02538-201ENST00000609107 PES1O00541 588 aaKnown RBP16.89■□□□□ 0.29
LINC02538-201ENST00000609107 ABCC4O15439 1325 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 G3V3G9 751 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 HOXC9P31274 260 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 KIAA0232Q92628 1395 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 PLEKHG3A1L390 1219 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
LINC02538-201ENST00000609107 A0A087WZG4 1122 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 MARCH6O60337 910 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 DHX8Q14562 1220 aaKnown RBP16.88■□□□□ 0.29
LINC02538-201ENST00000609107 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
LINC02538-201ENST00000609107 ZSCAN23Q3MJ62 389 aa16.87■□□□□ 0.29
LINC02538-201ENST00000609107 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
LINC02538-201ENST00000609107 CDKL5O76039 1030 aa16.87■□□□□ 0.29
LINC02538-201ENST00000609107 IMMTQ16891 758 aaKnown RBP16.87■□□□□ 0.29
LINC02538-201ENST00000609107 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
LINC02538-201ENST00000609107 HECW2Q9P2P5 1572 aa16.87■□□□□ 0.29
LINC02538-201ENST00000609107 LAMC1P11047 1609 aa16.86■□□□□ 0.29
LINC02538-201ENST00000609107 IFIT1P09914 478 aaKnown RBP16.86■□□□□ 0.29
LINC02538-201ENST00000609107 TTC41PQ6P2S7 1318 aa16.86■□□□□ 0.29
LINC02538-201ENST00000609107 STARD3NLO95772 234 aa16.86■□□□□ 0.29
LINC02538-201ENST00000609107 G2E3Q7L622 706 aa16.86■□□□□ 0.29
LINC02538-201ENST00000609107 DDX11Q96FC9 970 aa16.86■□□□□ 0.29
LINC02538-201ENST00000609107 AATKQ6ZMQ8 1374 aa16.86■□□□□ 0.29
LINC02538-201ENST00000609107 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
LINC02538-201ENST00000609107 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
LINC02538-201ENST00000609107 GJB2P29033 226 aa16.86■□□□□ 0.29
LINC02538-201ENST00000609107 SPHKAPQ2M3C7 1700 aa16.85■□□□□ 0.29
LINC02538-201ENST00000609107 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
LINC02538-201ENST00000609107 ATP7BP35670 1465 aa16.85■□□□□ 0.29
LINC02538-201ENST00000609107 GRM8O00222 908 aa16.85■□□□□ 0.29
LINC02538-201ENST00000609107 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
LINC02538-201ENST00000609107 GNL3LQ9NVN8 582 aaKnown RBP16.85■□□□□ 0.29
LINC02538-201ENST00000609107 FAM177BA6PVY3 158 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
LINC02538-201ENST00000609107 SMC2O95347 1197 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 CHMLP26374 656 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 TRIM22Q8IYM9 498 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 IP6K1Q92551 441 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 TMEM2Q9UHN6 1383 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 UBE2HP62256 183 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 CEP57L1Q8IYX8 460 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 MPNDQ8N594 471 aa16.84■□□□□ 0.29
LINC02538-201ENST00000609107 INTS4Q96HW7 963 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms