RNA–Protein interactions for RNA: ENST00000608749.5

TOM1-219, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-219ENST00000608749 A0A0G2JLW4 131 aa17.57■□□□□ 0.4
TOM1-219ENST00000608749 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
TOM1-219ENST00000608749 NARFQ9UHQ1 456 aa17.57■□□□□ 0.4
TOM1-219ENST00000608749 A0A087WZG4 1122 aa17.56■□□□□ 0.4
TOM1-219ENST00000608749 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
TOM1-219ENST00000608749 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
TOM1-219ENST00000608749 RALBP1Q15311 655 aa17.56■□□□□ 0.4
TOM1-219ENST00000608749 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
TOM1-219ENST00000608749 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
TOM1-219ENST00000608749 DPEP1P16444 411 aa17.55■□□□□ 0.4
TOM1-219ENST00000608749 DDR1Q08345 913 aa17.55■□□□□ 0.4
TOM1-219ENST00000608749 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
TOM1-219ENST00000608749 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
TOM1-219ENST00000608749 KCNQ3O43525 872 aa17.54■□□□□ 0.4
TOM1-219ENST00000608749 TM4SF1P30408 202 aa17.54■□□□□ 0.4
TOM1-219ENST00000608749 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
TOM1-219ENST00000608749 PXDNLA1KZ92 1463 aa17.54■□□□□ 0.4
TOM1-219ENST00000608749 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
TOM1-219ENST00000608749 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
TOM1-219ENST00000608749 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
TOM1-219ENST00000608749 C4AP0C0L4 1744 aa17.52■□□□□ 0.4
TOM1-219ENST00000608749 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
TOM1-219ENST00000608749 NFIXQ14938 502 aa17.52■□□□□ 0.4
TOM1-219ENST00000608749 A1BGP04217 495 aa17.51■□□□□ 0.39
TOM1-219ENST00000608749 TAF7Q15545 349 aaPredicted RBP17.51■□□□□ 0.39
TOM1-219ENST00000608749 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
TOM1-219ENST00000608749 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
TOM1-219ENST00000608749 NFE2L2Q16236 605 aa17.5■□□□□ 0.39
TOM1-219ENST00000608749 BICDL1Q6ZP65 573 aa17.5■□□□□ 0.39
TOM1-219ENST00000608749 PIM2Q9P1W9 311 aa17.5■□□□□ 0.39
TOM1-219ENST00000608749 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
TOM1-219ENST00000608749 UBR2Q8IWV8 1755 aa17.5■□□□□ 0.39
TOM1-219ENST00000608749 GIGYF1O75420 1035 aaPredicted RBP17.49■□□□□ 0.39
TOM1-219ENST00000608749 SERPINB2P05120 415 aa17.49■□□□□ 0.39
TOM1-219ENST00000608749 ARHGAP27Q6ZUM4 889 aa17.49■□□□□ 0.39
TOM1-219ENST00000608749 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
TOM1-219ENST00000608749 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
TOM1-219ENST00000608749 KCNA3P22001 575 aa17.48■□□□□ 0.39
TOM1-219ENST00000608749 DALRD3Q5D0E6 543 aaKnown RBP17.48■□□□□ 0.39
TOM1-219ENST00000608749 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
TOM1-219ENST00000608749 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
TOM1-219ENST00000608749 CHRNA5P30532 468 aa17.47■□□□□ 0.39
TOM1-219ENST00000608749 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
TOM1-219ENST00000608749 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
TOM1-219ENST00000608749 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
TOM1-219ENST00000608749 MYBBP1AQ9BQG0 1328 aaKnown RBP17.47■□□□□ 0.39
TOM1-219ENST00000608749 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
TOM1-219ENST00000608749 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
TOM1-219ENST00000608749 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
TOM1-219ENST00000608749 C1QTNF8P60827 252 aa17.45■□□□□ 0.38
TOM1-219ENST00000608749 TBC1D9BQ66K14 1250 aa17.45■□□□□ 0.38
TOM1-219ENST00000608749 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
TOM1-219ENST00000608749 N4BP2Q86UW6 1770 aaPredicted RBP17.45■□□□□ 0.38
TOM1-219ENST00000608749 NPHP1O15259 732 aa17.44■□□□□ 0.38
TOM1-219ENST00000608749 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
TOM1-219ENST00000608749 ZNF526Q8TF50 670 aaPredicted RBP17.44■□□□□ 0.38
TOM1-219ENST00000608749 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
TOM1-219ENST00000608749 CAMTA2O94983 1202 aa17.43■□□□□ 0.38
TOM1-219ENST00000608749 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
TOM1-219ENST00000608749 ADCY9O60503 1353 aa17.42■□□□□ 0.38
TOM1-219ENST00000608749 H0YIN7 160 aa17.42■□□□□ 0.38
TOM1-219ENST00000608749 RIPK4P57078 832 aa17.42■□□□□ 0.38
TOM1-219ENST00000608749 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
TOM1-219ENST00000608749 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
TOM1-219ENST00000608749 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
TOM1-219ENST00000608749 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
TOM1-219ENST00000608749 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
TOM1-219ENST00000608749 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
TOM1-219ENST00000608749 PDE6BP35913 854 aa17.4■□□□□ 0.38
TOM1-219ENST00000608749 CLEC4GQ6UXB4 293 aa17.4■□□□□ 0.38
TOM1-219ENST00000608749 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
TOM1-219ENST00000608749 CNBD1Q8NA66 436 aa17.4■□□□□ 0.38
TOM1-219ENST00000608749 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
TOM1-219ENST00000608749 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
TOM1-219ENST00000608749 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
TOM1-219ENST00000608749 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
TOM1-219ENST00000608749 BRIP1Q9BX63 1249 aa17.39■□□□□ 0.37
TOM1-219ENST00000608749 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
TOM1-219ENST00000608749 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
TOM1-219ENST00000608749 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
TOM1-219ENST00000608749 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
TOM1-219ENST00000608749 ST5P78524 1137 aa17.38■□□□□ 0.37
TOM1-219ENST00000608749 C9orf131Q5VYM1 1079 aa17.38■□□□□ 0.37
TOM1-219ENST00000608749 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
TOM1-219ENST00000608749 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
TOM1-219ENST00000608749 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.37
TOM1-219ENST00000608749 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
TOM1-219ENST00000608749 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
TOM1-219ENST00000608749 NBPF5PQ86XG9 351 aaPredicted RBP17.37■□□□□ 0.37
TOM1-219ENST00000608749 CCDC24Q8N4L8 307 aa17.37■□□□□ 0.37
TOM1-219ENST00000608749 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
TOM1-219ENST00000608749 RUNDC1Q96C34 613 aa17.36■□□□□ 0.37
TOM1-219ENST00000608749 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
TOM1-219ENST00000608749 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
TOM1-219ENST00000608749 RGL2O15211 777 aa17.35■□□□□ 0.37
TOM1-219ENST00000608749 RNF181Q9P0P0 153 aa17.35■□□□□ 0.37
TOM1-219ENST00000608749 NIP7Q9Y221 180 aaKnown RBP eCLIP17.35■□□□□ 0.37
TOM1-219ENST00000608749 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
TOM1-219ENST00000608749 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
TOM1-219ENST00000608749 TPTE2Q6XPS3 522 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms