RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 A0A0G2JLW4 131 aa17.57■□□□□ 0.4
TOM1-218ENST00000608674 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
TOM1-218ENST00000608674 NARFQ9UHQ1 456 aa17.57■□□□□ 0.4
TOM1-218ENST00000608674 A0A087WZG4 1122 aa17.56■□□□□ 0.4
TOM1-218ENST00000608674 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
TOM1-218ENST00000608674 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
TOM1-218ENST00000608674 RALBP1Q15311 655 aa17.56■□□□□ 0.4
TOM1-218ENST00000608674 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
TOM1-218ENST00000608674 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
TOM1-218ENST00000608674 DPEP1P16444 411 aa17.55■□□□□ 0.4
TOM1-218ENST00000608674 DDR1Q08345 913 aa17.55■□□□□ 0.4
TOM1-218ENST00000608674 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
TOM1-218ENST00000608674 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
TOM1-218ENST00000608674 KCNQ3O43525 872 aa17.54■□□□□ 0.4
TOM1-218ENST00000608674 TM4SF1P30408 202 aa17.54■□□□□ 0.4
TOM1-218ENST00000608674 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
TOM1-218ENST00000608674 PXDNLA1KZ92 1463 aa17.54■□□□□ 0.4
TOM1-218ENST00000608674 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
TOM1-218ENST00000608674 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
TOM1-218ENST00000608674 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
TOM1-218ENST00000608674 C4AP0C0L4 1744 aa17.52■□□□□ 0.4
TOM1-218ENST00000608674 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
TOM1-218ENST00000608674 NFIXQ14938 502 aa17.52■□□□□ 0.4
TOM1-218ENST00000608674 A1BGP04217 495 aa17.51■□□□□ 0.39
TOM1-218ENST00000608674 TAF7Q15545 349 aaPredicted RBP17.51■□□□□ 0.39
TOM1-218ENST00000608674 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
TOM1-218ENST00000608674 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
TOM1-218ENST00000608674 NFE2L2Q16236 605 aa17.5■□□□□ 0.39
TOM1-218ENST00000608674 BICDL1Q6ZP65 573 aa17.5■□□□□ 0.39
TOM1-218ENST00000608674 PIM2Q9P1W9 311 aa17.5■□□□□ 0.39
TOM1-218ENST00000608674 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
TOM1-218ENST00000608674 UBR2Q8IWV8 1755 aa17.5■□□□□ 0.39
TOM1-218ENST00000608674 GIGYF1O75420 1035 aaPredicted RBP17.49■□□□□ 0.39
TOM1-218ENST00000608674 SERPINB2P05120 415 aa17.49■□□□□ 0.39
TOM1-218ENST00000608674 ARHGAP27Q6ZUM4 889 aa17.49■□□□□ 0.39
TOM1-218ENST00000608674 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
TOM1-218ENST00000608674 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
TOM1-218ENST00000608674 KCNA3P22001 575 aa17.48■□□□□ 0.39
TOM1-218ENST00000608674 DALRD3Q5D0E6 543 aaKnown RBP17.48■□□□□ 0.39
TOM1-218ENST00000608674 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
TOM1-218ENST00000608674 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
TOM1-218ENST00000608674 CHRNA5P30532 468 aa17.47■□□□□ 0.39
TOM1-218ENST00000608674 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
TOM1-218ENST00000608674 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
TOM1-218ENST00000608674 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
TOM1-218ENST00000608674 MYBBP1AQ9BQG0 1328 aaKnown RBP17.47■□□□□ 0.39
TOM1-218ENST00000608674 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
TOM1-218ENST00000608674 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
TOM1-218ENST00000608674 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
TOM1-218ENST00000608674 C1QTNF8P60827 252 aa17.45■□□□□ 0.38
TOM1-218ENST00000608674 TBC1D9BQ66K14 1250 aa17.45■□□□□ 0.38
TOM1-218ENST00000608674 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
TOM1-218ENST00000608674 N4BP2Q86UW6 1770 aaPredicted RBP17.45■□□□□ 0.38
TOM1-218ENST00000608674 NPHP1O15259 732 aa17.44■□□□□ 0.38
TOM1-218ENST00000608674 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
TOM1-218ENST00000608674 ZNF526Q8TF50 670 aaPredicted RBP17.44■□□□□ 0.38
TOM1-218ENST00000608674 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
TOM1-218ENST00000608674 CAMTA2O94983 1202 aa17.43■□□□□ 0.38
TOM1-218ENST00000608674 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
TOM1-218ENST00000608674 ADCY9O60503 1353 aa17.42■□□□□ 0.38
TOM1-218ENST00000608674 H0YIN7 160 aa17.42■□□□□ 0.38
TOM1-218ENST00000608674 RIPK4P57078 832 aa17.42■□□□□ 0.38
TOM1-218ENST00000608674 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
TOM1-218ENST00000608674 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
TOM1-218ENST00000608674 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
TOM1-218ENST00000608674 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
TOM1-218ENST00000608674 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
TOM1-218ENST00000608674 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
TOM1-218ENST00000608674 PDE6BP35913 854 aa17.4■□□□□ 0.38
TOM1-218ENST00000608674 CLEC4GQ6UXB4 293 aa17.4■□□□□ 0.38
TOM1-218ENST00000608674 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
TOM1-218ENST00000608674 CNBD1Q8NA66 436 aa17.4■□□□□ 0.38
TOM1-218ENST00000608674 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
TOM1-218ENST00000608674 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
TOM1-218ENST00000608674 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
TOM1-218ENST00000608674 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
TOM1-218ENST00000608674 BRIP1Q9BX63 1249 aa17.39■□□□□ 0.37
TOM1-218ENST00000608674 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
TOM1-218ENST00000608674 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
TOM1-218ENST00000608674 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
TOM1-218ENST00000608674 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
TOM1-218ENST00000608674 ST5P78524 1137 aa17.38■□□□□ 0.37
TOM1-218ENST00000608674 C9orf131Q5VYM1 1079 aa17.38■□□□□ 0.37
TOM1-218ENST00000608674 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
TOM1-218ENST00000608674 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
TOM1-218ENST00000608674 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.37
TOM1-218ENST00000608674 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
TOM1-218ENST00000608674 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
TOM1-218ENST00000608674 NBPF5PQ86XG9 351 aaPredicted RBP17.37■□□□□ 0.37
TOM1-218ENST00000608674 CCDC24Q8N4L8 307 aa17.37■□□□□ 0.37
TOM1-218ENST00000608674 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
TOM1-218ENST00000608674 RUNDC1Q96C34 613 aa17.36■□□□□ 0.37
TOM1-218ENST00000608674 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
TOM1-218ENST00000608674 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
TOM1-218ENST00000608674 RGL2O15211 777 aa17.35■□□□□ 0.37
TOM1-218ENST00000608674 RNF181Q9P0P0 153 aa17.35■□□□□ 0.37
TOM1-218ENST00000608674 NIP7Q9Y221 180 aaKnown RBP eCLIP17.35■□□□□ 0.37
TOM1-218ENST00000608674 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
TOM1-218ENST00000608674 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
TOM1-218ENST00000608674 TPTE2Q6XPS3 522 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms