RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GNAT3A8MTJ3 354 aa18.02■□□□□ 0.48
POLR2J3-219ENST00000608621 CANXP27824 592 aaKnown RBP18.02■□□□□ 0.48
POLR2J3-219ENST00000608621 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.48
POLR2J3-219ENST00000608621 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.47
POLR2J3-219ENST00000608621 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
POLR2J3-219ENST00000608621 HSPA6P17066 643 aa18.01■□□□□ 0.47
POLR2J3-219ENST00000608621 TEFQ10587 303 aa18.01■□□□□ 0.47
POLR2J3-219ENST00000608621 NFIXQ14938 502 aa18.01■□□□□ 0.47
POLR2J3-219ENST00000608621 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
POLR2J3-219ENST00000608621 BCL2L12Q9HB09 334 aa18.01■□□□□ 0.47
POLR2J3-219ENST00000608621 COL15A1P39059 1388 aa18.01■□□□□ 0.47
POLR2J3-219ENST00000608621 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
POLR2J3-219ENST00000608621 STARD3NLO95772 234 aa18■□□□□ 0.47
POLR2J3-219ENST00000608621 C9orf131Q5VYM1 1079 aa18■□□□□ 0.47
POLR2J3-219ENST00000608621 SERPINB2P05120 415 aa17.99■□□□□ 0.47
POLR2J3-219ENST00000608621 ZNF790Q6PG37 636 aa17.99■□□□□ 0.47
POLR2J3-219ENST00000608621 ZNF496Q96IT1 587 aaPredicted RBP17.99■□□□□ 0.47
POLR2J3-219ENST00000608621 PHACTR3Q96KR7 559 aa17.98■□□□□ 0.47
POLR2J3-219ENST00000608621 ARFGEF1Q9Y6D6 1849 aa17.98■□□□□ 0.47
POLR2J3-219ENST00000608621 EIF5P55010 431 aaKnown RBP17.97■□□□□ 0.47
POLR2J3-219ENST00000608621 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
POLR2J3-219ENST00000608621 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
POLR2J3-219ENST00000608621 NMRK2Q9NPI5 230 aa17.97■□□□□ 0.47
POLR2J3-219ENST00000608621 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
POLR2J3-219ENST00000608621 TOMM70O94826 608 aa17.96■□□□□ 0.47
POLR2J3-219ENST00000608621 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.47
POLR2J3-219ENST00000608621 CEP350Q5VT06 3117 aa17.96■□□□□ 0.47
POLR2J3-219ENST00000608621 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
POLR2J3-219ENST00000608621 UBR2Q8IWV8 1755 aa17.95■□□□□ 0.46
POLR2J3-219ENST00000608621 A0A087WZG4 1122 aa17.95■□□□□ 0.46
POLR2J3-219ENST00000608621 PRKAR2BP31323 418 aa17.95■□□□□ 0.46
POLR2J3-219ENST00000608621 RNF181Q9P0P0 153 aa17.95■□□□□ 0.46
POLR2J3-219ENST00000608621 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
POLR2J3-219ENST00000608621 NUDCQ9Y266 331 aa17.94■□□□□ 0.46
POLR2J3-219ENST00000608621 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
POLR2J3-219ENST00000608621 KCNQ3O43525 872 aa17.93■□□□□ 0.46
POLR2J3-219ENST00000608621 A1BGP04217 495 aa17.93■□□□□ 0.46
POLR2J3-219ENST00000608621 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
POLR2J3-219ENST00000608621 TBC1D2BQ9UPU7 963 aa17.93■□□□□ 0.46
POLR2J3-219ENST00000608621 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
POLR2J3-219ENST00000608621 PPP2R1AP30153 589 aa17.92■□□□□ 0.46
POLR2J3-219ENST00000608621 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
POLR2J3-219ENST00000608621 C2CD5Q86YS7 1000 aa17.92■□□□□ 0.46
POLR2J3-219ENST00000608621 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
POLR2J3-219ENST00000608621 H0YIN7 160 aa17.91■□□□□ 0.46
POLR2J3-219ENST00000608621 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-219ENST00000608621 IL6STP40189 918 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-219ENST00000608621 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
POLR2J3-219ENST00000608621 TTLL6Q8N841 843 aa17.91■□□□□ 0.46
POLR2J3-219ENST00000608621 NRXN2Q9P2S2 1712 aa17.91■□□□□ 0.46
POLR2J3-219ENST00000608621 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-219ENST00000608621 RASSF7Q02833 373 aa17.9■□□□□ 0.46
POLR2J3-219ENST00000608621 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
POLR2J3-219ENST00000608621 RRAGCQ9HB90 399 aa17.9■□□□□ 0.46
POLR2J3-219ENST00000608621 SBF1O95248 1867 aa17.9■□□□□ 0.46
POLR2J3-219ENST00000608621 APLP1P51693 650 aa17.89■□□□□ 0.45
POLR2J3-219ENST00000608621 C16orf71Q8IYS4 520 aaPredicted RBP17.89■□□□□ 0.45
POLR2J3-219ENST00000608621 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
POLR2J3-219ENST00000608621 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.45
POLR2J3-219ENST00000608621 CARMIL3Q8ND23 1372 aa17.89■□□□□ 0.45
POLR2J3-219ENST00000608621 MCM10Q7L590 875 aa17.88■□□□□ 0.45
POLR2J3-219ENST00000608621 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
POLR2J3-219ENST00000608621 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
POLR2J3-219ENST00000608621 PRELPP51888 382 aa17.87■□□□□ 0.45
POLR2J3-219ENST00000608621 PRR5LQ6MZQ0 368 aa17.87■□□□□ 0.45
POLR2J3-219ENST00000608621 RBM46Q8TBY0 533 aaKnown RBP17.87■□□□□ 0.45
POLR2J3-219ENST00000608621 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
POLR2J3-219ENST00000608621 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
POLR2J3-219ENST00000608621 CAMTA2O94983 1202 aa17.86■□□□□ 0.45
POLR2J3-219ENST00000608621 LMNB1P20700 586 aa17.86■□□□□ 0.45
POLR2J3-219ENST00000608621 PDE6BP35913 854 aa17.86■□□□□ 0.45
POLR2J3-219ENST00000608621 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
POLR2J3-219ENST00000608621 DCTN1Q14203 1278 aa17.86■□□□□ 0.45
POLR2J3-219ENST00000608621 ZNF622Q969S3 477 aaKnown RBP eCLIP17.86■□□□□ 0.45
POLR2J3-219ENST00000608621 SETDB2Q96T68 719 aa17.86■□□□□ 0.45
POLR2J3-219ENST00000608621 DZIP3Q86Y13 1208 aaKnown RBP17.85■□□□□ 0.45
POLR2J3-219ENST00000608621 PDZRN3Q9UPQ7 1066 aa17.85■□□□□ 0.45
POLR2J3-219ENST00000608621 SNRPA1P09661 255 aaKnown RBP17.84■□□□□ 0.45
POLR2J3-219ENST00000608621 DNAJC5GQ8N7S2 189 aa17.84■□□□□ 0.45
POLR2J3-219ENST00000608621 ZNF219Q9P2Y4 722 aaPredicted RBP17.84■□□□□ 0.45
POLR2J3-219ENST00000608621 NFKBIEO00221 500 aa17.83■□□□□ 0.44
POLR2J3-219ENST00000608621 NPHP1O15259 732 aa17.83■□□□□ 0.44
POLR2J3-219ENST00000608621 HTATSF1O43719 755 aaKnown RBP17.83■□□□□ 0.44
POLR2J3-219ENST00000608621 DLEC1Q9Y238 1755 aa17.83■□□□□ 0.44
POLR2J3-219ENST00000608621 C21orf2O43822 256 aa17.82■□□□□ 0.44
POLR2J3-219ENST00000608621 FSTL1Q12841 308 aa17.82■□□□□ 0.44
POLR2J3-219ENST00000608621 TAF7Q15545 349 aaPredicted RBP17.82■□□□□ 0.44
POLR2J3-219ENST00000608621 CNBD1Q8NA66 436 aa17.82■□□□□ 0.44
POLR2J3-219ENST00000608621 ANKRD31Q8N7Z5 1873 aa17.82■□□□□ 0.44
POLR2J3-219ENST00000608621 ZC3H4Q9UPT8 1303 aaKnown RBP17.81■□□□□ 0.44
POLR2J3-219ENST00000608621 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
POLR2J3-219ENST00000608621 IFFO2Q5TF58 517 aa17.81■□□□□ 0.44
POLR2J3-219ENST00000608621 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
POLR2J3-219ENST00000608621 CCDC88AQ3V6T2 1871 aa17.81■□□□□ 0.44
POLR2J3-219ENST00000608621 SCN7AQ01118 1682 aa17.8■□□□□ 0.44
POLR2J3-219ENST00000608621 ST5P78524 1137 aa17.8■□□□□ 0.44
POLR2J3-219ENST00000608621 CLEC4GQ6UXB4 293 aa17.8■□□□□ 0.44
POLR2J3-219ENST00000608621 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
POLR2J3-219ENST00000608621 VEGFAP15692 232 aaPredicted RBP17.79■□□□□ 0.44
POLR2J3-219ENST00000608621 HTRA3P83110 453 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms