RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 RGPD2P0DJD1 1756 aa8.2□□□□□ -1.1
LINC00649-213ENST00000608431 TMEM88BA6NKF7 163 aa8.2□□□□□ -1.1
LINC00649-213ENST00000608431 LMNB1P20700 586 aa8.2□□□□□ -1.1
LINC00649-213ENST00000608431 NLGN1Q8N2Q7 840 aa8.2□□□□□ -1.1
LINC00649-213ENST00000608431 TRPC6Q9Y210 931 aa8.2□□□□□ -1.1
LINC00649-213ENST00000608431 PALLDQ8WX93 1383 aa8.2□□□□□ -1.1
LINC00649-213ENST00000608431 DLEC1Q9Y238 1755 aa8.2□□□□□ -1.1
LINC00649-213ENST00000608431 EVX2Q03828 476 aa8.19□□□□□ -1.1
LINC00649-213ENST00000608431 ANKRD24Q8TF21 1146 aa8.19□□□□□ -1.1
LINC00649-213ENST00000608431 SMARCC1Q92922 1105 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-213ENST00000608431 MFRPQ9BY79 579 aa8.19□□□□□ -1.1
LINC00649-213ENST00000608431 TTC21AQ8NDW8 1320 aa8.19□□□□□ -1.1
LINC00649-213ENST00000608431 TRPM7Q96QT4 1865 aa8.19□□□□□ -1.1
LINC00649-213ENST00000608431 SZT2Q5T011 3432 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 RASSF10A6NK89 507 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 POTECB2RU33 542 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 KCNA3P22001 575 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 DEFB115Q30KQ5 88 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 ZCRB1Q8TBF4 217 aaKnown RBP8.18□□□□□ -1.1
LINC00649-213ENST00000608431 MS4A3Q96HJ5 214 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 STAC3Q96MF2 364 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 MCOLN1Q9GZU1 580 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 PARP3Q9Y6F1 533 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 PASKQ96RG2 1323 aa8.18□□□□□ -1.1
LINC00649-213ENST00000608431 TMF1P82094 1093 aa8.17□□□□□ -1.1
LINC00649-213ENST00000608431 SMIM5Q71RC9 77 aa8.17□□□□□ -1.1
LINC00649-213ENST00000608431 AMIGO3Q86WK7 504 aa8.17□□□□□ -1.1
LINC00649-213ENST00000608431 CABP1Q9NZU7 370 aa8.17□□□□□ -1.1
LINC00649-213ENST00000608431 TTC21BQ7Z4L5 1316 aa8.17□□□□□ -1.1
LINC00649-213ENST00000608431 WDR33Q9C0J8 1336 aaKnown RBP8.17□□□□□ -1.1
LINC00649-213ENST00000608431 MON2Q7Z3U7 1717 aa8.17□□□□□ -1.1
LINC00649-213ENST00000608431 LTBP1Q14766 1721 aa8.16□□□□□ -1.1
LINC00649-213ENST00000608431 FER1L6Q2WGJ9 1857 aa8.16□□□□□ -1.1
LINC00649-213ENST00000608431 EFCAB3Q8N7B9 438 aa8.16□□□□□ -1.1
LINC00649-213ENST00000608431 GNPATO15228 680 aa8.15□□□□□ -1.1
LINC00649-213ENST00000608431 CA12O43570 354 aa8.15□□□□□ -1.1
LINC00649-213ENST00000608431 DGKZQ13574 1117 aa8.15□□□□□ -1.1
LINC00649-213ENST00000608431 LDHDQ86WU2 507 aa8.15□□□□□ -1.1
LINC00649-213ENST00000608431 FBXO22Q8NEZ5 403 aa8.15□□□□□ -1.1
LINC00649-213ENST00000608431 MPHOSPH9Q99550 1183 aa8.15□□□□□ -1.1
LINC00649-213ENST00000608431 CABP2Q9NPB3 220 aa8.15□□□□□ -1.1
LINC00649-213ENST00000608431 CEP290O15078 2479 aa8.15□□□□□ -1.1
LINC00649-213ENST00000608431 COL6A3P12111 3177 aa8.15□□□□□ -1.11
LINC00649-213ENST00000608431 CGNL1Q0VF96 1302 aa8.14□□□□□ -1.11
LINC00649-213ENST00000608431 ECE1P42892 770 aa8.14□□□□□ -1.11
LINC00649-213ENST00000608431 RASSF7Q02833 373 aa8.14□□□□□ -1.11
LINC00649-213ENST00000608431 NBPF15Q8N660 670 aa8.14□□□□□ -1.11
LINC00649-213ENST00000608431 RYDENQ9NUL5 291 aaKnown RBP8.14□□□□□ -1.11
LINC00649-213ENST00000608431 ZNF831Q5JPB2 1677 aa8.14□□□□□ -1.11
LINC00649-213ENST00000608431 MKI67P46013 3256 aaKnown RBP8.13□□□□□ -1.11
LINC00649-213ENST00000608431 AFDNP55196 1824 aaKnown RBP8.13□□□□□ -1.11
LINC00649-213ENST00000608431 IQCA1LA6NCM1 817 aa8.13□□□□□ -1.11
LINC00649-213ENST00000608431 DLL1O00548 723 aa8.13□□□□□ -1.11
LINC00649-213ENST00000608431 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
LINC00649-213ENST00000608431 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
LINC00649-213ENST00000608431 COL5A3P25940 1745 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-213ENST00000608431 AKAP11Q9UKA4 1901 aa8.12□□□□□ -1.11
LINC00649-213ENST00000608431 PPP1R37O75864 691 aa8.12□□□□□ -1.11
LINC00649-213ENST00000608431 ITGBL1O95965 494 aaPredicted RBP8.12□□□□□ -1.11
LINC00649-213ENST00000608431 POTEIP0CG38 1075 aa8.12□□□□□ -1.11
LINC00649-213ENST00000608431 POTEJP0CG39 1038 aa8.12□□□□□ -1.11
LINC00649-213ENST00000608431 HABP4Q5JVS0 413 aaKnown RBP8.12□□□□□ -1.11
LINC00649-213ENST00000608431 YTHDC1Q96MU7 727 aaKnown RBP8.12□□□□□ -1.11
LINC00649-213ENST00000608431 ABT1Q9ULW3 272 aaKnown RBP8.12□□□□□ -1.11
LINC00649-213ENST00000608431 ADAMTSL1Q8N6G6 1762 aa8.12□□□□□ -1.11
LINC00649-213ENST00000608431 ADAMTS7Q9UKP4 1686 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 USP31Q70CQ4 1352 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 LOC102724428A0A0B4J2F2 783 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 HAX1O00165 279 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 SOX10P56693 466 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 SIK1P57059 783 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 LINC00116Q8NCU8 138 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 GPR101Q96P66 508 aaPredicted RBP8.11□□□□□ -1.11
LINC00649-213ENST00000608431 TMEM106CQ9BVX2 250 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 RTCBQ9Y3I0 505 aaKnown RBP8.11□□□□□ -1.11
LINC00649-213ENST00000608431 MEGF6O75095 1541 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 MYH14Q7Z406 1995 aaKnown RBP8.11□□□□□ -1.11
LINC00649-213ENST00000608431 SMG6Q86US8 1419 aaKnown RBP8.11□□□□□ -1.11
LINC00649-213ENST00000608431 CACNA1SQ13698 1873 aa8.11□□□□□ -1.11
LINC00649-213ENST00000608431 PCDH11XQ9BZA7 1347 aa8.1□□□□□ -1.11
LINC00649-213ENST00000608431 PCDH11YQ9BZA8 1340 aa8.1□□□□□ -1.11
LINC00649-213ENST00000608431 CENPJQ9HC77 1338 aaPredicted RBP8.1□□□□□ -1.11
LINC00649-213ENST00000608431 TRIOBPQ9H2D6 2365 aa8.1□□□□□ -1.11
LINC00649-213ENST00000608431 GALR2O43603 387 aaPredicted RBP8.1□□□□□ -1.11
LINC00649-213ENST00000608431 GYS1P13807 737 aa8.1□□□□□ -1.11
LINC00649-213ENST00000608431 RFC4P35249 363 aa8.1□□□□□ -1.11
LINC00649-213ENST00000608431 MAP2K2P36507 400 aa8.1□□□□□ -1.11
LINC00649-213ENST00000608431 CAPNS2Q96L46 248 aa8.1□□□□□ -1.11
LINC00649-213ENST00000608431 ANP32EQ9BTT0 268 aa8.1□□□□□ -1.11
LINC00649-213ENST00000608431 KTN1Q86UP2 1357 aaKnown RBP8.1□□□□□ -1.11
LINC00649-213ENST00000608431 CHRNA5P30532 468 aa8.09□□□□□ -1.11
LINC00649-213ENST00000608431 ERFEQ4G0M1 354 aa8.09□□□□□ -1.11
LINC00649-213ENST00000608431 IP6K1Q92551 441 aa8.09□□□□□ -1.11
LINC00649-213ENST00000608431 MS4A4AQ96JQ5 239 aa8.09□□□□□ -1.11
LINC00649-213ENST00000608431 TSKSQ9UJT2 592 aa8.09□□□□□ -1.11
LINC00649-213ENST00000608431 CD163L1Q9NR16 1453 aa8.08□□□□□ -1.12
LINC00649-213ENST00000608431 ATP6V1AP38606 617 aa8.08□□□□□ -1.12
LINC00649-213ENST00000608431 NBPF1Q3BBV0 1214 aa8.08□□□□□ -1.12
LINC00649-213ENST00000608431 TTLL6Q8N841 843 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms