RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 TM4SF1P30408 202 aa18.36■□□□□ 0.53
CTSA-218ENST00000607814 CHRNA5P30532 468 aa18.36■□□□□ 0.53
CTSA-218ENST00000607814 SRP68Q9UHB9 627 aaKnown RBP18.36■□□□□ 0.53
CTSA-218ENST00000607814 DIAPH1O60610 1272 aaKnown RBP18.35■□□□□ 0.53
CTSA-218ENST00000607814 VEGFAP15692 232 aaPredicted RBP18.35■□□□□ 0.53
CTSA-218ENST00000607814 LMNB1P20700 586 aa18.35■□□□□ 0.53
CTSA-218ENST00000607814 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
CTSA-218ENST00000607814 NPC1L1Q9UHC9 1359 aa18.34■□□□□ 0.53
CTSA-218ENST00000607814 GLTPD2A6NH11 291 aa18.34■□□□□ 0.53
CTSA-218ENST00000607814 ZPR1O75312 459 aa18.34■□□□□ 0.53
CTSA-218ENST00000607814 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
CTSA-218ENST00000607814 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.52
CTSA-218ENST00000607814 CAPN15O75808 1086 aa18.33■□□□□ 0.52
CTSA-218ENST00000607814 INTS5Q6P9B9 1019 aaKnown RBP18.33■□□□□ 0.52
CTSA-218ENST00000607814 TJP1Q07157 1748 aa18.32■□□□□ 0.52
CTSA-218ENST00000607814 ADAMTS7Q9UKP4 1686 aa18.32■□□□□ 0.52
CTSA-218ENST00000607814 PPP2R1AP30153 589 aa18.32■□□□□ 0.52
CTSA-218ENST00000607814 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
CTSA-218ENST00000607814 HSPA1AP0DMV8 641 aaKnown RBP18.3■□□□□ 0.52
CTSA-218ENST00000607814 HSPA1BP0DMV9 641 aaKnown RBP18.3■□□□□ 0.52
CTSA-218ENST00000607814 USPL1Q5W0Q7 1092 aa18.3■□□□□ 0.52
CTSA-218ENST00000607814 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
CTSA-218ENST00000607814 RASSF7Q02833 373 aa18.29■□□□□ 0.52
CTSA-218ENST00000607814 TTLL6Q8N841 843 aa18.29■□□□□ 0.52
CTSA-218ENST00000607814 NARFQ9UHQ1 456 aa18.29■□□□□ 0.52
CTSA-218ENST00000607814 DLEC1Q9Y238 1755 aa18.29■□□□□ 0.52
CTSA-218ENST00000607814 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
CTSA-218ENST00000607814 COL3A1P02461 1466 aaPredicted RBP18.27■□□□□ 0.52
CTSA-218ENST00000607814 NFIXQ14938 502 aa18.27■□□□□ 0.52
CTSA-218ENST00000607814 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.51
CTSA-218ENST00000607814 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
CTSA-218ENST00000607814 MTHFSDQ2M296 383 aaKnown RBP18.26■□□□□ 0.51
CTSA-218ENST00000607814 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
CTSA-218ENST00000607814 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
CTSA-218ENST00000607814 SERPINB2P05120 415 aa18.25■□□□□ 0.51
CTSA-218ENST00000607814 CYP19A1P11511 503 aaPredicted RBP18.25■□□□□ 0.51
CTSA-218ENST00000607814 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
CTSA-218ENST00000607814 PDZRN3Q9UPQ7 1066 aa18.25■□□□□ 0.51
CTSA-218ENST00000607814 TIAM2Q8IVF5 1701 aa18.25■□□□□ 0.51
CTSA-218ENST00000607814 COL15A1P39059 1388 aa18.25■□□□□ 0.51
CTSA-218ENST00000607814 H0YIN7 160 aa18.24■□□□□ 0.51
CTSA-218ENST00000607814 AKAP4Q5JQC9 854 aa18.24■□□□□ 0.51
CTSA-218ENST00000607814 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
CTSA-218ENST00000607814 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
CTSA-218ENST00000607814 POTECB2RU33 542 aa18.23■□□□□ 0.51
CTSA-218ENST00000607814 NFKBIEO00221 500 aa18.23■□□□□ 0.51
CTSA-218ENST00000607814 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
CTSA-218ENST00000607814 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
CTSA-218ENST00000607814 CREBZFQ9NS37 354 aa18.23■□□□□ 0.51
CTSA-218ENST00000607814 MRC1P22897 1456 aa18.22■□□□□ 0.51
CTSA-218ENST00000607814 CCDC88AQ3V6T2 1871 aa18.22■□□□□ 0.51
CTSA-218ENST00000607814 U2AF1L5P0DN76 240 aaPredicted RBP18.21■□□□□ 0.51
CTSA-218ENST00000607814 U2AF1Q01081 240 aaKnown RBP eCLIP18.21■□□□□ 0.51
CTSA-218ENST00000607814 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
CTSA-218ENST00000607814 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
CTSA-218ENST00000607814 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
CTSA-218ENST00000607814 ZBTB1Q9Y2K1 713 aa18.2■□□□□ 0.5
CTSA-218ENST00000607814 RNMTO43148 476 aaKnown RBP18.19■□□□□ 0.5
CTSA-218ENST00000607814 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
CTSA-218ENST00000607814 LTBP3Q9NS15 1303 aa18.19■□□□□ 0.5
CTSA-218ENST00000607814 A0A087WZG4 1122 aa18.18■□□□□ 0.5
CTSA-218ENST00000607814 PDE6BP35913 854 aa18.18■□□□□ 0.5
CTSA-218ENST00000607814 SLC39A6Q13433 755 aa18.18■□□□□ 0.5
CTSA-218ENST00000607814 ERFEQ4G0M1 354 aa18.18■□□□□ 0.5
CTSA-218ENST00000607814 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
CTSA-218ENST00000607814 BRIP1Q9BX63 1249 aa18.18■□□□□ 0.5
CTSA-218ENST00000607814 RSPH6AQ9H0K4 717 aa18.18■□□□□ 0.5
CTSA-218ENST00000607814 NUDCQ9Y266 331 aa18.18■□□□□ 0.5
CTSA-218ENST00000607814 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
CTSA-218ENST00000607814 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
CTSA-218ENST00000607814 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
CTSA-218ENST00000607814 STARD3NLO95772 234 aa18.16■□□□□ 0.5
CTSA-218ENST00000607814 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
CTSA-218ENST00000607814 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
CTSA-218ENST00000607814 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
CTSA-218ENST00000607814 C21orf2O43822 256 aa18.14■□□□□ 0.49
CTSA-218ENST00000607814 SOGA3Q5TF21 947 aa18.14■□□□□ 0.49
CTSA-218ENST00000607814 IL17REQ8NFR9 667 aa18.14■□□□□ 0.49
CTSA-218ENST00000607814 TAOK3Q9H2K8 898 aa18.14■□□□□ 0.49
CTSA-218ENST00000607814 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
CTSA-218ENST00000607814 IQCA1LA6NCM1 817 aa18.13■□□□□ 0.49
CTSA-218ENST00000607814 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
CTSA-218ENST00000607814 MKRN1Q9UHC7 482 aaKnown RBP18.13■□□□□ 0.49
CTSA-218ENST00000607814 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
CTSA-218ENST00000607814 CNTNAP1P78357 1384 aa18.13■□□□□ 0.49
CTSA-218ENST00000607814 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
CTSA-218ENST00000607814 GAS2L2Q8NHY3 880 aa18.12■□□□□ 0.49
CTSA-218ENST00000607814 CNKSR1Q969H4 720 aa18.12■□□□□ 0.49
CTSA-218ENST00000607814 TEX13AQ9BXU3 409 aaPredicted RBP18.12■□□□□ 0.49
CTSA-218ENST00000607814 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
CTSA-218ENST00000607814 GNAT3A8MTJ3 354 aa18.11■□□□□ 0.49
CTSA-218ENST00000607814 RALBP1Q15311 655 aa18.11■□□□□ 0.49
CTSA-218ENST00000607814 TBC1D9BQ66K14 1250 aa18.11■□□□□ 0.49
CTSA-218ENST00000607814 PRR5LQ6MZQ0 368 aa18.11■□□□□ 0.49
CTSA-218ENST00000607814 LDHDQ86WU2 507 aa18.11■□□□□ 0.49
CTSA-218ENST00000607814 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
CTSA-218ENST00000607814 PASKQ96RG2 1323 aa18.11■□□□□ 0.49
CTSA-218ENST00000607814 FOXN1O15353 648 aa18.1■□□□□ 0.49
CTSA-218ENST00000607814 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
CTSA-218ENST00000607814 STYK1Q6J9G0 422 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms