RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 CRKLP46109 303 aaKnown RBP14.39□□□□□ -0.11
RFTN1-212ENST00000607320 ADAMTS7Q9UKP4 1686 aa14.39□□□□□ -0.11
RFTN1-212ENST00000607320 CNGB1Q14028 1251 aaPredicted RBP14.38□□□□□ -0.11
RFTN1-212ENST00000607320 SPRYD3Q8NCJ5 442 aa14.38□□□□□ -0.11
RFTN1-212ENST00000607320 LGR6Q9HBX8 967 aa14.38□□□□□ -0.11
RFTN1-212ENST00000607320 COL3A1P02461 1466 aaPredicted RBP14.38□□□□□ -0.11
RFTN1-212ENST00000607320 N4BP2Q86UW6 1770 aaPredicted RBP14.37□□□□□ -0.11
RFTN1-212ENST00000607320 GYS1P13807 737 aa14.37□□□□□ -0.11
RFTN1-212ENST00000607320 PRKCSHP14314 528 aaPredicted RBP14.37□□□□□ -0.11
RFTN1-212ENST00000607320 MTHFSDQ2M296 383 aaKnown RBP14.37□□□□□ -0.11
RFTN1-212ENST00000607320 CCDC87Q9NVE4 849 aa14.37□□□□□ -0.11
RFTN1-212ENST00000607320 PARP3Q9Y6F1 533 aa14.37□□□□□ -0.11
RFTN1-212ENST00000607320 U2SURPO15042 1029 aaKnown RBP14.36□□□□□ -0.11
RFTN1-212ENST00000607320 GIGYF1O75420 1035 aaPredicted RBP14.36□□□□□ -0.11
RFTN1-212ENST00000607320 TGFB2P61812 414 aa14.36□□□□□ -0.11
RFTN1-212ENST00000607320 C10orf71Q711Q0 1435 aa14.35□□□□□ -0.11
RFTN1-212ENST00000607320 C1QTNF8P60827 252 aa14.35□□□□□ -0.11
RFTN1-212ENST00000607320 GAS2L2Q8NHY3 880 aa14.35□□□□□ -0.11
RFTN1-212ENST00000607320 CFAP53Q96M91 514 aa14.35□□□□□ -0.11
RFTN1-212ENST00000607320 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
RFTN1-212ENST00000607320 UBR2Q8IWV8 1755 aa14.34□□□□□ -0.11
RFTN1-212ENST00000607320 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
RFTN1-212ENST00000607320 SLC39A6Q13433 755 aa14.34□□□□□ -0.11
RFTN1-212ENST00000607320 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
RFTN1-212ENST00000607320 WWC3Q9ULE0 1092 aa14.34□□□□□ -0.11
RFTN1-212ENST00000607320 USP42Q9H9J4 1324 aaKnown RBP14.34□□□□□ -0.11
RFTN1-212ENST00000607320 BRCA1P38398 1863 aaKnown RBP14.33□□□□□ -0.11
RFTN1-212ENST00000607320 KCPQ6ZWJ8 1503 aa14.33□□□□□ -0.12
RFTN1-212ENST00000607320 INTS5Q6P9B9 1019 aaKnown RBP14.33□□□□□ -0.12
RFTN1-212ENST00000607320 TTC5Q8N0Z6 440 aa14.33□□□□□ -0.12
RFTN1-212ENST00000607320 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
RFTN1-212ENST00000607320 ZPR1O75312 459 aa14.32□□□□□ -0.12
RFTN1-212ENST00000607320 TEFQ10587 303 aa14.32□□□□□ -0.12
RFTN1-212ENST00000607320 SRP68Q9UHB9 627 aaKnown RBP14.32□□□□□ -0.12
RFTN1-212ENST00000607320 NUDCQ9Y266 331 aa14.32□□□□□ -0.12
RFTN1-212ENST00000607320 SIPA1L3O60292 1781 aaPredicted RBP14.32□□□□□ -0.12
RFTN1-212ENST00000607320 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
RFTN1-212ENST00000607320 CYP19A1P11511 503 aaPredicted RBP14.31□□□□□ -0.12
RFTN1-212ENST00000607320 SOS1Q07889 1333 aaPredicted RBP14.31□□□□□ -0.12
RFTN1-212ENST00000607320 ARFGEF1Q9Y6D6 1849 aa14.31□□□□□ -0.12
RFTN1-212ENST00000607320 ADCY9O60503 1353 aa14.31□□□□□ -0.12
RFTN1-212ENST00000607320 A0A0G2JLW4 131 aa14.3□□□□□ -0.12
RFTN1-212ENST00000607320 CIZ1Q9ULV3 898 aaPredicted RBP14.3□□□□□ -0.12
RFTN1-212ENST00000607320 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
RFTN1-212ENST00000607320 COL15A1P39059 1388 aa14.3□□□□□ -0.12
RFTN1-212ENST00000607320 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
RFTN1-212ENST00000607320 DPEP1P16444 411 aa14.29□□□□□ -0.12
RFTN1-212ENST00000607320 USPL1Q5W0Q7 1092 aa14.29□□□□□ -0.12
RFTN1-212ENST00000607320 GPBP1L1Q9HC44 474 aaPredicted RBP14.29□□□□□ -0.12
RFTN1-212ENST00000607320 ZBTB1Q9Y2K1 713 aa14.29□□□□□ -0.12
RFTN1-212ENST00000607320 AFDNP55196 1824 aaKnown RBP14.29□□□□□ -0.12
RFTN1-212ENST00000607320 STARD3NLO95772 234 aa14.28□□□□□ -0.12
RFTN1-212ENST00000607320 PRKAR2BP31323 418 aa14.28□□□□□ -0.12
RFTN1-212ENST00000607320 IL17REQ8NFR9 667 aa14.28□□□□□ -0.12
RFTN1-212ENST00000607320 TEX13AQ9BXU3 409 aaPredicted RBP14.28□□□□□ -0.12
RFTN1-212ENST00000607320 NARFQ9UHQ1 456 aa14.28□□□□□ -0.12
RFTN1-212ENST00000607320 POLRMTO00411 1230 aaKnown RBP14.27□□□□□ -0.13
RFTN1-212ENST00000607320 FCHSD2O94868 740 aa14.27□□□□□ -0.13
RFTN1-212ENST00000607320 PPP2R1AP30153 589 aa14.27□□□□□ -0.13
RFTN1-212ENST00000607320 TM4SF1P30408 202 aa14.27□□□□□ -0.13
RFTN1-212ENST00000607320 DDR1Q08345 913 aa14.27□□□□□ -0.13
RFTN1-212ENST00000607320 ZNF790Q6PG37 636 aa14.27□□□□□ -0.13
RFTN1-212ENST00000607320 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.13
RFTN1-212ENST00000607320 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
RFTN1-212ENST00000607320 HEG1Q9ULI3 1381 aa14.26□□□□□ -0.13
RFTN1-212ENST00000607320 U2AF1L5P0DN76 240 aaPredicted RBP14.26□□□□□ -0.13
RFTN1-212ENST00000607320 U2AF1Q01081 240 aaKnown RBP eCLIP14.26□□□□□ -0.13
RFTN1-212ENST00000607320 PIM2Q9P1W9 311 aa14.26□□□□□ -0.13
RFTN1-212ENST00000607320 NRXN2Q9P2S2 1712 aa14.25□□□□□ -0.13
RFTN1-212ENST00000607320 A0A087WZG4 1122 aa14.25□□□□□ -0.13
RFTN1-212ENST00000607320 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
RFTN1-212ENST00000607320 ARHGAP27Q6ZUM4 889 aa14.25□□□□□ -0.13
RFTN1-212ENST00000607320 ZNF526Q8TF50 670 aaPredicted RBP14.25□□□□□ -0.13
RFTN1-212ENST00000607320 ZNF496Q96IT1 587 aaPredicted RBP14.25□□□□□ -0.13
RFTN1-212ENST00000607320 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
RFTN1-212ENST00000607320 FMNL2Q96PY5 1086 aa14.25□□□□□ -0.13
RFTN1-212ENST00000607320 BTBD11A6QL63 1104 aa14.24□□□□□ -0.13
RFTN1-212ENST00000607320 KCNA3P22001 575 aa14.24□□□□□ -0.13
RFTN1-212ENST00000607320 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
RFTN1-212ENST00000607320 DALRD3Q5D0E6 543 aaKnown RBP14.24□□□□□ -0.13
RFTN1-212ENST00000607320 NPM2Q86SE8 214 aaKnown RBP14.24□□□□□ -0.13
RFTN1-212ENST00000607320 RTF1Q92541 710 aaKnown RBP14.24□□□□□ -0.13
RFTN1-212ENST00000607320 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
RFTN1-212ENST00000607320 EIF5P55010 431 aaKnown RBP14.23□□□□□ -0.13
RFTN1-212ENST00000607320 NFIXQ14938 502 aa14.23□□□□□ -0.13
RFTN1-212ENST00000607320 DLEC1Q9Y238 1755 aa14.22□□□□□ -0.13
RFTN1-212ENST00000607320 NEFMP07197 916 aa14.22□□□□□ -0.13
RFTN1-212ENST00000607320 SCN7AQ01118 1682 aa14.22□□□□□ -0.13
RFTN1-212ENST00000607320 SBF1O95248 1867 aa14.22□□□□□ -0.13
RFTN1-212ENST00000607320 SERPINB2P05120 415 aa14.21□□□□□ -0.13
RFTN1-212ENST00000607320 IL6STP40189 918 aaPredicted RBP14.21□□□□□ -0.13
RFTN1-212ENST00000607320 BCL2L12Q9HB09 334 aa14.21□□□□□ -0.13
RFTN1-212ENST00000607320 ZNF330Q9Y3S2 320 aaPredicted RBP14.21□□□□□ -0.13
RFTN1-212ENST00000607320 DLG5Q8TDM6 1919 aa14.21□□□□□ -0.14
RFTN1-212ENST00000607320 HTATSF1O43719 755 aaKnown RBP14.2□□□□□ -0.14
RFTN1-212ENST00000607320 CHRNA5P30532 468 aa14.2□□□□□ -0.14
RFTN1-212ENST00000607320 BICDL1Q6ZP65 573 aa14.19□□□□□ -0.14
RFTN1-212ENST00000607320 MCM10Q7L590 875 aa14.19□□□□□ -0.14
RFTN1-212ENST00000607320 HS6ST3Q8IZP7 471 aa14.19□□□□□ -0.14
RFTN1-212ENST00000607320 BCORQ6W2J9 1755 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms