RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 RNF181Q9P0P0 153 aa20.03■□□□□ 0.8
CTSA-216ENST00000607212 ZBTB1Q9Y2K1 713 aa20.03■□□□□ 0.8
CTSA-216ENST00000607212 ZNF330Q9Y3S2 320 aaPredicted RBP20.03■□□□□ 0.8
CTSA-216ENST00000607212 MRC1P22897 1456 aa20.03■□□□□ 0.8
CTSA-216ENST00000607212 TEFQ10587 303 aa20.02■□□□□ 0.8
CTSA-216ENST00000607212 TOMM70O94826 608 aa20.01■□□□□ 0.79
CTSA-216ENST00000607212 TM4SF1P30408 202 aa20.01■□□□□ 0.79
CTSA-216ENST00000607212 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
CTSA-216ENST00000607212 NARFQ9UHQ1 456 aa20.01■□□□□ 0.79
CTSA-216ENST00000607212 AFDNP55196 1824 aaKnown RBP20.01■□□□□ 0.79
CTSA-216ENST00000607212 KCPQ6ZWJ8 1503 aa20.01■□□□□ 0.79
CTSA-216ENST00000607212 STARD3NLO95772 234 aa20■□□□□ 0.79
CTSA-216ENST00000607212 NFIXQ14938 502 aa20■□□□□ 0.79
CTSA-216ENST00000607212 ADAMTS7Q9UKP4 1686 aa20■□□□□ 0.79
CTSA-216ENST00000607212 APLP1P51693 650 aa19.99■□□□□ 0.79
CTSA-216ENST00000607212 NPM2Q86SE8 214 aaKnown RBP19.99■□□□□ 0.79
CTSA-216ENST00000607212 GAS2L2Q8NHY3 880 aa19.99■□□□□ 0.79
CTSA-216ENST00000607212 KDM2BQ8NHM5 1336 aa19.99■□□□□ 0.79
CTSA-216ENST00000607212 PER1O15534 1290 aaPredicted RBP19.98■□□□□ 0.79
CTSA-216ENST00000607212 SERPINB2P05120 415 aa19.98■□□□□ 0.79
CTSA-216ENST00000607212 VSIG10Q8N0Z9 540 aa19.98■□□□□ 0.79
CTSA-216ENST00000607212 A0A087WZG4 1122 aa19.97■□□□□ 0.79
CTSA-216ENST00000607212 GNAT3A8MTJ3 354 aa19.97■□□□□ 0.79
CTSA-216ENST00000607212 UBR2Q8IWV8 1755 aa19.96■□□□□ 0.79
CTSA-216ENST00000607212 NPHP1O15259 732 aa19.96■□□□□ 0.79
CTSA-216ENST00000607212 C2CD5Q86YS7 1000 aa19.96■□□□□ 0.79
CTSA-216ENST00000607212 CFAP53Q96M91 514 aa19.96■□□□□ 0.79
CTSA-216ENST00000607212 SBF1O95248 1867 aa19.95■□□□□ 0.78
CTSA-216ENST00000607212 RASSF7Q02833 373 aa19.95■□□□□ 0.78
CTSA-216ENST00000607212 IFFO2Q5TF58 517 aa19.94■□□□□ 0.78
CTSA-216ENST00000607212 RRAGCQ9HB90 399 aa19.94■□□□□ 0.78
CTSA-216ENST00000607212 H0YIN7 160 aa19.93■□□□□ 0.78
CTSA-216ENST00000607212 TTLL6Q8N841 843 aa19.93■□□□□ 0.78
CTSA-216ENST00000607212 RBM46Q8TBY0 533 aaKnown RBP19.93■□□□□ 0.78
CTSA-216ENST00000607212 ZNF496Q96IT1 587 aaPredicted RBP19.93■□□□□ 0.78
CTSA-216ENST00000607212 TEX13AQ9BXU3 409 aaPredicted RBP19.93■□□□□ 0.78
CTSA-216ENST00000607212 BCL2L12Q9HB09 334 aa19.93■□□□□ 0.78
CTSA-216ENST00000607212 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
CTSA-216ENST00000607212 ZNF790Q6PG37 636 aa19.92■□□□□ 0.78
CTSA-216ENST00000607212 IL17REQ8NFR9 667 aa19.92■□□□□ 0.78
CTSA-216ENST00000607212 ZNF622Q969S3 477 aaKnown RBP eCLIP19.92■□□□□ 0.78
CTSA-216ENST00000607212 FMNL2Q96PY5 1086 aa19.92■□□□□ 0.78
CTSA-216ENST00000607212 TBC1D2BQ9UPU7 963 aa19.92■□□□□ 0.78
CTSA-216ENST00000607212 HEG1Q9ULI3 1381 aa19.92■□□□□ 0.78
CTSA-216ENST00000607212 NRXN2Q9P2S2 1712 aa19.91■□□□□ 0.78
CTSA-216ENST00000607212 DLEC1Q9Y238 1755 aa19.91■□□□□ 0.78
CTSA-216ENST00000607212 CCDC88AQ3V6T2 1871 aa19.91■□□□□ 0.78
CTSA-216ENST00000607212 PRKAR2BP31323 418 aa19.91■□□□□ 0.78
CTSA-216ENST00000607212 ZNF219Q9P2Y4 722 aaPredicted RBP19.91■□□□□ 0.78
CTSA-216ENST00000607212 NUDCQ9Y266 331 aa19.91■□□□□ 0.78
CTSA-216ENST00000607212 TNRC6CQ9HCJ0 1690 aaKnown RBP19.91■□□□□ 0.78
CTSA-216ENST00000607212 BTBD11A6QL63 1104 aa19.9■□□□□ 0.78
CTSA-216ENST00000607212 EIF5P55010 431 aaKnown RBP19.9■□□□□ 0.78
CTSA-216ENST00000607212 TBC1D9BQ66K14 1250 aa19.9■□□□□ 0.78
CTSA-216ENST00000607212 NPC1L1Q9UHC9 1359 aa19.9■□□□□ 0.78
CTSA-216ENST00000607212 SIPA1L3O60292 1781 aaPredicted RBP19.89■□□□□ 0.77
CTSA-216ENST00000607212 LMNB1P20700 586 aa19.89■□□□□ 0.77
CTSA-216ENST00000607212 CCDC24Q8N4L8 307 aa19.89■□□□□ 0.77
CTSA-216ENST00000607212 CARMIL3Q8ND23 1372 aa19.89■□□□□ 0.77
CTSA-216ENST00000607212 WDR90Q96KV7 1748 aa19.89■□□□□ 0.77
CTSA-216ENST00000607212 RTF1Q92541 710 aaKnown RBP19.88■□□□□ 0.77
CTSA-216ENST00000607212 CEP350Q5VT06 3117 aa19.88■□□□□ 0.77
CTSA-216ENST00000607212 SCN7AQ01118 1682 aa19.87■□□□□ 0.77
CTSA-216ENST00000607212 A1BGP04217 495 aa19.87■□□□□ 0.77
CTSA-216ENST00000607212 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
CTSA-216ENST00000607212 PDE6BP35913 854 aa19.87■□□□□ 0.77
CTSA-216ENST00000607212 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.77
CTSA-216ENST00000607212 FSTL1Q12841 308 aa19.87■□□□□ 0.77
CTSA-216ENST00000607212 TIAM2Q8IVF5 1701 aa19.86■□□□□ 0.77
CTSA-216ENST00000607212 IL6STP40189 918 aaPredicted RBP19.86■□□□□ 0.77
CTSA-216ENST00000607212 PHACTR3Q96KR7 559 aa19.86■□□□□ 0.77
CTSA-216ENST00000607212 SETDB2Q96T68 719 aa19.86■□□□□ 0.77
CTSA-216ENST00000607212 CACNA1SQ13698 1873 aa19.86■□□□□ 0.77
CTSA-216ENST00000607212 ST5P78524 1137 aa19.85■□□□□ 0.77
CTSA-216ENST00000607212 HTRA3P83110 453 aa19.85■□□□□ 0.77
CTSA-216ENST00000607212 CNBD1Q8NA66 436 aa19.85■□□□□ 0.77
CTSA-216ENST00000607212 SMC1BQ8NDV3 1235 aa19.85■□□□□ 0.77
CTSA-216ENST00000607212 ANKRD31Q8N7Z5 1873 aa19.84■□□□□ 0.77
CTSA-216ENST00000607212 ZC3H4Q9UPT8 1303 aaKnown RBP19.84■□□□□ 0.77
CTSA-216ENST00000607212 KCNQ3O43525 872 aa19.84■□□□□ 0.77
CTSA-216ENST00000607212 DZIP3Q86Y13 1208 aaKnown RBP19.84■□□□□ 0.77
CTSA-216ENST00000607212 RSPH6AQ9H0K4 717 aa19.84■□□□□ 0.77
CTSA-216ENST00000607212 PDZRN3Q9UPQ7 1066 aa19.84■□□□□ 0.77
CTSA-216ENST00000607212 C21orf2O43822 256 aa19.83■□□□□ 0.77
CTSA-216ENST00000607212 PIP4K2AP48426 406 aaPredicted RBP19.83■□□□□ 0.77
CTSA-216ENST00000607212 PRR5LQ6MZQ0 368 aa19.83■□□□□ 0.77
CTSA-216ENST00000607212 BRIP1Q9BX63 1249 aa19.83■□□□□ 0.77
CTSA-216ENST00000607212 GLTPD2A6NH11 291 aa19.82■□□□□ 0.76
CTSA-216ENST00000607212 MCM10Q7L590 875 aa19.82■□□□□ 0.76
CTSA-216ENST00000607212 NEFMP07197 916 aa19.81■□□□□ 0.76
CTSA-216ENST00000607212 VEGFAP15692 232 aaPredicted RBP19.81■□□□□ 0.76
CTSA-216ENST00000607212 DPY19L2Q6NUT2 758 aa19.81■□□□□ 0.76
CTSA-216ENST00000607212 COL11A2P13942 1736 aaPredicted RBP19.81■□□□□ 0.76
CTSA-216ENST00000607212 CEMIPQ8WUJ3 1361 aa19.81■□□□□ 0.76
CTSA-216ENST00000607212 NFKBIEO00221 500 aa19.8■□□□□ 0.76
CTSA-216ENST00000607212 CAMTA2O94983 1202 aa19.8■□□□□ 0.76
CTSA-216ENST00000607212 DNAJC5GQ8N7S2 189 aa19.8■□□□□ 0.76
CTSA-216ENST00000607212 ZNF652Q9Y2D9 606 aa19.8■□□□□ 0.76
CTSA-216ENST00000607212 USP16Q9Y5T5 823 aa19.8■□□□□ 0.76
CTSA-216ENST00000607212 BCORQ6W2J9 1755 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms