RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 HYPKQ9NX55 129 aa20.56■□□□□ 0.88
CNN2-212ENST00000607102 NOB1Q9ULX3 412 aaKnown RBP20.56■□□□□ 0.88
CNN2-212ENST00000607102 ZNF831Q5JPB2 1677 aa20.55■□□□□ 0.88
CNN2-212ENST00000607102 KCNQ2O43526 872 aa20.55■□□□□ 0.88
CNN2-212ENST00000607102 DDX21Q9NR30 783 aaKnown RBP eCLIP20.55■□□□□ 0.88
CNN2-212ENST00000607102 CICQ96RK0 1608 aaPredicted RBP20.55■□□□□ 0.88
CNN2-212ENST00000607102 FAM182BQ5T319 152 aa20.54■□□□□ 0.88
CNN2-212ENST00000607102 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
CNN2-212ENST00000607102 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
CNN2-212ENST00000607102 LOC102724428A0A0B4J2F2 783 aa20.53■□□□□ 0.88
CNN2-212ENST00000607102 TCERG1O14776 1098 aaKnown RBP20.53■□□□□ 0.88
CNN2-212ENST00000607102 PLIN1O60240 522 aa20.53■□□□□ 0.88
CNN2-212ENST00000607102 SIK1P57059 783 aa20.53■□□□□ 0.88
CNN2-212ENST00000607102 DDX58O95786 925 aaKnown RBP20.52■□□□□ 0.88
CNN2-212ENST00000607102 FLIIQ13045 1269 aa20.52■□□□□ 0.88
CNN2-212ENST00000607102 DZIP1LQ8IYY4 767 aaKnown RBP20.52■□□□□ 0.88
CNN2-212ENST00000607102 CHMP4BQ9H444 224 aaKnown RBP20.51■□□□□ 0.87
CNN2-212ENST00000607102 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
CNN2-212ENST00000607102 PRAMEF22A3QJZ6 481 aa20.5■□□□□ 0.87
CNN2-212ENST00000607102 TRIM27P14373 513 aa20.5■□□□□ 0.87
CNN2-212ENST00000607102 ATP6V1AP38606 617 aa20.5■□□□□ 0.87
CNN2-212ENST00000607102 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
CNN2-212ENST00000607102 FKBP8Q14318 412 aa20.5■□□□□ 0.87
CNN2-212ENST00000607102 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
CNN2-212ENST00000607102 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
CNN2-212ENST00000607102 TJP1Q07157 1748 aa20.48■□□□□ 0.87
CNN2-212ENST00000607102 TRIM37O94972 964 aa20.48■□□□□ 0.87
CNN2-212ENST00000607102 AAMPQ13685 434 aa20.48■□□□□ 0.87
CNN2-212ENST00000607102 LY75O60449 1722 aa20.47■□□□□ 0.87
CNN2-212ENST00000607102 PXDNLA1KZ92 1463 aa20.46■□□□□ 0.87
CNN2-212ENST00000607102 CYP19A1P11511 503 aaPredicted RBP20.46■□□□□ 0.87
CNN2-212ENST00000607102 GTF3C3Q9Y5Q9 886 aa20.46■□□□□ 0.87
CNN2-212ENST00000607102 ABCC4O15439 1325 aa20.46■□□□□ 0.87
CNN2-212ENST00000607102 MYL6BP14649 208 aa20.45■□□□□ 0.86
CNN2-212ENST00000607102 IRX6P78412 446 aaPredicted RBP20.45■□□□□ 0.86
CNN2-212ENST00000607102 PDIA6Q15084 440 aa20.45■□□□□ 0.86
CNN2-212ENST00000607102 SLC27A3Q5K4L6 730 aa20.45■□□□□ 0.86
CNN2-212ENST00000607102 CLUAP1Q96AJ1 413 aa20.45■□□□□ 0.86
CNN2-212ENST00000607102 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
CNN2-212ENST00000607102 CCT4P50991 539 aaKnown RBP20.44■□□□□ 0.86
CNN2-212ENST00000607102 MVPQ14764 893 aaKnown RBP20.44■□□□□ 0.86
CNN2-212ENST00000607102 G2E3Q7L622 706 aa20.44■□□□□ 0.86
CNN2-212ENST00000607102 SLC4A9Q96Q91 983 aa20.44■□□□□ 0.86
CNN2-212ENST00000607102 CCDC87Q9NVE4 849 aa20.44■□□□□ 0.86
CNN2-212ENST00000607102 DDX19BQ9UMR2 479 aa20.44■□□□□ 0.86
CNN2-212ENST00000607102 ITPRIPQ8IWB1 547 aa20.43■□□□□ 0.86
CNN2-212ENST00000607102 PANK1Q8TE04 598 aa20.43■□□□□ 0.86
CNN2-212ENST00000607102 PHAXQ9H814 394 aaKnown RBP20.43■□□□□ 0.86
CNN2-212ENST00000607102 COL5A3P25940 1745 aaPredicted RBP20.43■□□□□ 0.86
CNN2-212ENST00000607102 A1BGP04217 495 aa20.42■□□□□ 0.86
CNN2-212ENST00000607102 IL6STP40189 918 aaPredicted RBP20.42■□□□□ 0.86
CNN2-212ENST00000607102 PROSER3Q2NL68 480 aa20.42■□□□□ 0.86
CNN2-212ENST00000607102 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
CNN2-212ENST00000607102 KSR2Q6VAB6 950 aa20.42■□□□□ 0.86
CNN2-212ENST00000607102 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
CNN2-212ENST00000607102 CNTNAP4Q9C0A0 1308 aa20.42■□□□□ 0.86
CNN2-212ENST00000607102 PLSCR1O15162 318 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 ANXA1P04083 346 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 CRKLP46109 303 aaKnown RBP20.41■□□□□ 0.86
CNN2-212ENST00000607102 SF3B2Q13435 895 aaKnown RBP20.41■□□□□ 0.86
CNN2-212ENST00000607102 RC3H1Q5TC82 1133 aaKnown RBP20.41■□□□□ 0.86
CNN2-212ENST00000607102 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
CNN2-212ENST00000607102 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 PTF1AQ7RTS3 328 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 XAGE3Q8WTP9 111 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 DNAAF4Q8WXU2 420 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 COG6Q9Y2V7 657 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 RREB1Q92766 1687 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 RGPD3A6NKT7 1758 aaPredicted RBP20.41■□□□□ 0.86
CNN2-212ENST00000607102 RGPD4Q7Z3J3 1758 aa20.41■□□□□ 0.86
CNN2-212ENST00000607102 NBPF26B4DH59 902 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 AIMP1Q12904 312 aaKnown RBP20.4■□□□□ 0.86
CNN2-212ENST00000607102 ITPK1Q13572 414 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 NBPF14Q5TI25 921 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 NBPF10Q6P3W6 841 aaKnown RBP20.4■□□□□ 0.86
CNN2-212ENST00000607102 SLC4A10Q6U841 1118 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 COPS6Q7L5N1 327 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 RIC3Q7Z5B4 369 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 TMEM57Q8N5G2 664 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 NBPF15Q8N660 670 aa20.4■□□□□ 0.86
CNN2-212ENST00000607102 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.86
CNN2-212ENST00000607102 PI4KAP2A4QPH2 592 aa20.39■□□□□ 0.85
CNN2-212ENST00000607102 APBA3O96018 575 aa20.39■□□□□ 0.85
CNN2-212ENST00000607102 RLBP1P12271 317 aa20.39■□□□□ 0.85
CNN2-212ENST00000607102 ANKRD13DQ6ZTN6 518 aa20.39■□□□□ 0.85
CNN2-212ENST00000607102 PI4KAP1Q8N8J0 262 aa20.39■□□□□ 0.85
CNN2-212ENST00000607102 PLBD2Q8NHP8 589 aa20.39■□□□□ 0.85
CNN2-212ENST00000607102 ATP10DQ9P241 1426 aa20.38■□□□□ 0.85
CNN2-212ENST00000607102 A0A087WZG4 1122 aa20.38■□□□□ 0.85
CNN2-212ENST00000607102 LRP10Q7Z4F1 713 aa20.38■□□□□ 0.85
CNN2-212ENST00000607102 ZBTB1Q9Y2K1 713 aa20.38■□□□□ 0.85
CNN2-212ENST00000607102 TNS1Q9HBL0 1735 aaKnown RBP20.38■□□□□ 0.85
CNN2-212ENST00000607102 EXOC6Q8TAG9 804 aa20.37■□□□□ 0.85
CNN2-212ENST00000607102 MAP3K2Q9Y2U5 619 aa20.37■□□□□ 0.85
CNN2-212ENST00000607102 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
CNN2-212ENST00000607102 ADCY9O60503 1353 aa20.36■□□□□ 0.85
CNN2-212ENST00000607102 INTS5Q6P9B9 1019 aaKnown RBP20.36■□□□□ 0.85
CNN2-212ENST00000607102 LINC00116Q8NCU8 138 aa20.36■□□□□ 0.85
CNN2-212ENST00000607102 SRCIN1Q9C0H9 1055 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms