RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 CANXP27824 592 aaKnown RBP29.39■■■□□ 2.3
TMEM248-207ENST00000607045 BCL2L12Q9HB09 334 aa29.39■■■□□ 2.3
TMEM248-207ENST00000607045 KCPQ6ZWJ8 1503 aa29.39■■■□□ 2.3
TMEM248-207ENST00000607045 NFIXQ14938 502 aa29.38■■■□□ 2.29
TMEM248-207ENST00000607045 GAS2L2Q8NHY3 880 aa29.38■■■□□ 2.29
TMEM248-207ENST00000607045 KIF3CO14782 793 aa29.37■■■□□ 2.29
TMEM248-207ENST00000607045 TTC5Q8N0Z6 440 aa29.37■■■□□ 2.29
TMEM248-207ENST00000607045 ZNF496Q96IT1 587 aaPredicted RBP29.37■■■□□ 2.29
TMEM248-207ENST00000607045 TEFQ10587 303 aa29.36■■■□□ 2.29
TMEM248-207ENST00000607045 DALRD3Q5D0E6 543 aaKnown RBP29.36■■■□□ 2.29
TMEM248-207ENST00000607045 ADAMTS7Q9UKP4 1686 aa29.35■■■□□ 2.29
TMEM248-207ENST00000607045 ZNF790Q6PG37 636 aa29.34■■■□□ 2.29
TMEM248-207ENST00000607045 COL15A1P39059 1388 aa29.34■■■□□ 2.29
TMEM248-207ENST00000607045 STARD3NLO95772 234 aa29.33■■■□□ 2.29
TMEM248-207ENST00000607045 PRKAR2BP31323 418 aa29.33■■■□□ 2.29
TMEM248-207ENST00000607045 EIF5P55010 431 aaKnown RBP29.33■■■□□ 2.29
TMEM248-207ENST00000607045 RSPH6AQ9H0K4 717 aa29.33■■■□□ 2.29
TMEM248-207ENST00000607045 KCNQ3O43525 872 aa29.32■■■□□ 2.28
TMEM248-207ENST00000607045 C9orf131Q5VYM1 1079 aa29.32■■■□□ 2.28
TMEM248-207ENST00000607045 SERPINB2P05120 415 aa29.31■■■□□ 2.28
TMEM248-207ENST00000607045 CFAP53Q96M91 514 aa29.31■■■□□ 2.28
TMEM248-207ENST00000607045 PPP2R1AP30153 589 aa29.3■■■□□ 2.28
TMEM248-207ENST00000607045 BICDL1Q6ZP65 573 aa29.29■■■□□ 2.28
TMEM248-207ENST00000607045 VIRMAQ69YN4 1812 aaKnown RBP29.29■■■□□ 2.28
TMEM248-207ENST00000607045 HEG1Q9ULI3 1381 aa29.28■■■□□ 2.28
TMEM248-207ENST00000607045 HSPA6P17066 643 aa29.28■■■□□ 2.28
TMEM248-207ENST00000607045 TEX13AQ9BXU3 409 aaPredicted RBP29.27■■■□□ 2.28
TMEM248-207ENST00000607045 TBC1D2BQ9UPU7 963 aa29.27■■■□□ 2.28
TMEM248-207ENST00000607045 NUDCQ9Y266 331 aa29.27■■■□□ 2.28
TMEM248-207ENST00000607045 A1BGP04217 495 aa29.26■■■□□ 2.27
TMEM248-207ENST00000607045 U2AF1L5P0DN76 240 aaPredicted RBP29.26■■■□□ 2.27
TMEM248-207ENST00000607045 U2AF1Q01081 240 aaKnown RBP eCLIP29.26■■■□□ 2.27
TMEM248-207ENST00000607045 NMRK2Q9NPI5 230 aa29.26■■■□□ 2.27
TMEM248-207ENST00000607045 BRCA1P38398 1863 aaKnown RBP29.25■■■□□ 2.27
TMEM248-207ENST00000607045 BTBD11A6QL63 1104 aa29.25■■■□□ 2.27
TMEM248-207ENST00000607045 FMNL2Q96PY5 1086 aa29.25■■■□□ 2.27
TMEM248-207ENST00000607045 ZNF330Q9Y3S2 320 aaPredicted RBP29.25■■■□□ 2.27
TMEM248-207ENST00000607045 CEMIPQ8WUJ3 1361 aa29.25■■■□□ 2.27
TMEM248-207ENST00000607045 A0A087WZG4 1122 aa29.24■■■□□ 2.27
TMEM248-207ENST00000607045 TBC1D9BQ66K14 1250 aa29.24■■■□□ 2.27
TMEM248-207ENST00000607045 MCM10Q7L590 875 aa29.22■■■□□ 2.27
TMEM248-207ENST00000607045 RNF181Q9P0P0 153 aa29.22■■■□□ 2.27
TMEM248-207ENST00000607045 UBR2Q8IWV8 1755 aa29.21■■■□□ 2.27
TMEM248-207ENST00000607045 IL6STP40189 918 aaPredicted RBP29.21■■■□□ 2.27
TMEM248-207ENST00000607045 C2CD5Q86YS7 1000 aa29.21■■■□□ 2.27
TMEM248-207ENST00000607045 USP16Q9Y5T5 823 aa29.21■■■□□ 2.27
TMEM248-207ENST00000607045 PRAMEF22A3QJZ6 481 aa29.2■■■□□ 2.26
TMEM248-207ENST00000607045 DCTN1Q14203 1278 aa29.2■■■□□ 2.26
TMEM248-207ENST00000607045 CCDC24Q8N4L8 307 aa29.2■■■□□ 2.26
TMEM248-207ENST00000607045 TOMM70O94826 608 aa29.19■■■□□ 2.26
TMEM248-207ENST00000607045 CARMIL3Q8ND23 1372 aa29.18■■■□□ 2.26
TMEM248-207ENST00000607045 PIP4K2AP48426 406 aaPredicted RBP29.18■■■□□ 2.26
TMEM248-207ENST00000607045 H0YIN7 160 aa29.17■■■□□ 2.26
TMEM248-207ENST00000607045 RASSF7Q02833 373 aa29.17■■■□□ 2.26
TMEM248-207ENST00000607045 TTLL6Q8N841 843 aa29.17■■■□□ 2.26
TMEM248-207ENST00000607045 AFDNP55196 1824 aaKnown RBP29.17■■■□□ 2.26
TMEM248-207ENST00000607045 ARFGEF1Q9Y6D6 1849 aa29.17■■■□□ 2.26
TMEM248-207ENST00000607045 RTF1Q92541 710 aaKnown RBP29.16■■■□□ 2.26
TMEM248-207ENST00000607045 CAMTA2O94983 1202 aa29.15■■■□□ 2.26
TMEM248-207ENST00000607045 PRELPP51888 382 aa29.15■■■□□ 2.26
TMEM248-207ENST00000607045 SIPA1L3O60292 1781 aaPredicted RBP29.13■■■□□ 2.25
TMEM248-207ENST00000607045 PRR5LQ6MZQ0 368 aa29.13■■■□□ 2.25
TMEM248-207ENST00000607045 NPM2Q86SE8 214 aaKnown RBP29.13■■■□□ 2.25
TMEM248-207ENST00000607045 RRAGCQ9HB90 399 aa29.13■■■□□ 2.25
TMEM248-207ENST00000607045 NRXN2Q9P2S2 1712 aa29.13■■■□□ 2.25
TMEM248-207ENST00000607045 BRIP1Q9BX63 1249 aa29.12■■■□□ 2.25
TMEM248-207ENST00000607045 MIS18AQ9NYP9 233 aa29.12■■■□□ 2.25
TMEM248-207ENST00000607045 DZIP3Q86Y13 1208 aaKnown RBP29.11■■■□□ 2.25
TMEM248-207ENST00000607045 ZNF622Q969S3 477 aaKnown RBP eCLIP29.11■■■□□ 2.25
TMEM248-207ENST00000607045 SETDB2Q96T68 719 aa29.11■■■□□ 2.25
TMEM248-207ENST00000607045 SNRPA1P09661 255 aaKnown RBP29.1■■■□□ 2.25
TMEM248-207ENST00000607045 HTATSF1O43719 755 aaKnown RBP29.09■■■□□ 2.25
TMEM248-207ENST00000607045 ZNF219Q9P2Y4 722 aaPredicted RBP29.09■■■□□ 2.25
TMEM248-207ENST00000607045 LMNB1P20700 586 aa29.08■■■□□ 2.25
TMEM248-207ENST00000607045 PDE6BP35913 854 aa29.08■■■□□ 2.25
TMEM248-207ENST00000607045 KDM2BQ8NHM5 1336 aa29.08■■■□□ 2.25
TMEM248-207ENST00000607045 TAF7Q15545 349 aaPredicted RBP29.07■■■□□ 2.24
TMEM248-207ENST00000607045 NBPF26B4DH59 902 aa29.06■■■□□ 2.24
TMEM248-207ENST00000607045 NFKBIEO00221 500 aa29.06■■■□□ 2.24
TMEM248-207ENST00000607045 APLP1P51693 650 aa29.06■■■□□ 2.24
TMEM248-207ENST00000607045 NBPF10Q6P3W6 841 aaKnown RBP29.06■■■□□ 2.24
TMEM248-207ENST00000607045 C16orf71Q8IYS4 520 aaPredicted RBP29.06■■■□□ 2.24
TMEM248-207ENST00000607045 NBPF15Q8N660 670 aa29.06■■■□□ 2.24
TMEM248-207ENST00000607045 RBM46Q8TBY0 533 aaKnown RBP29.06■■■□□ 2.24
TMEM248-207ENST00000607045 C21orf2O43822 256 aa29.05■■■□□ 2.24
TMEM248-207ENST00000607045 SBF1O95248 1867 aa29.05■■■□□ 2.24
TMEM248-207ENST00000607045 DNAJC5GQ8N7S2 189 aa29.04■■■□□ 2.24
TMEM248-207ENST00000607045 CNBD1Q8NA66 436 aa29.04■■■□□ 2.24
TMEM248-207ENST00000607045 PDZRN3Q9UPQ7 1066 aa29.03■■■□□ 2.24
TMEM248-207ENST00000607045 NPHP1O15259 732 aa29.02■■■□□ 2.24
TMEM248-207ENST00000607045 PLEKHF1Q96S99 279 aa29.02■■■□□ 2.24
TMEM248-207ENST00000607045 CLEC4GQ6UXB4 293 aa29.01■■■□□ 2.23
TMEM248-207ENST00000607045 GLTPD2A6NH11 291 aa29■■■□□ 2.23
TMEM248-207ENST00000607045 SRGNP10124 158 aa28.99■■■□□ 2.23
TMEM248-207ENST00000607045 HTRA3P83110 453 aa28.99■■■□□ 2.23
TMEM248-207ENST00000607045 ANKRD31Q8N7Z5 1873 aa28.98■■■□□ 2.23
TMEM248-207ENST00000607045 ST5P78524 1137 aa28.98■■■□□ 2.23
TMEM248-207ENST00000607045 NBPF5PQ86XG9 351 aaPredicted RBP28.98■■■□□ 2.23
TMEM248-207ENST00000607045 THUMPD2Q9BTF0 503 aaKnown RBP28.98■■■□□ 2.23
TMEM248-207ENST00000607045 ZC3H4Q9UPT8 1303 aaKnown RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms