RNA–Protein interactions for RNA: ENST00000606885.1

AP002856.2-202, humanhuman

TSL 1 (best) BASIC

Gene AP002856.2, Length 755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-202ENST00000606885 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
AP002856.2-202ENST00000606885 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
AP002856.2-202ENST00000606885 TAF1DQ9H5J8 278 aaPredicted RBP12.84□□□□□ -0.35
AP002856.2-202ENST00000606885 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
AP002856.2-202ENST00000606885 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
AP002856.2-202ENST00000606885 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
AP002856.2-202ENST00000606885 MEGF6O75095 1541 aa12.83□□□□□ -0.35
AP002856.2-202ENST00000606885 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.36
AP002856.2-202ENST00000606885 RAPGEF4Q8WZA2 1011 aa12.83□□□□□ -0.36
AP002856.2-202ENST00000606885 PIGBQ92521 554 aa12.83□□□□□ -0.36
AP002856.2-202ENST00000606885 L3MBTL3Q96JM7 780 aaPredicted RBP12.83□□□□□ -0.36
AP002856.2-202ENST00000606885 KTN1Q86UP2 1357 aaKnown RBP12.82□□□□□ -0.36
AP002856.2-202ENST00000606885 NFKBIEO00221 500 aa12.82□□□□□ -0.36
AP002856.2-202ENST00000606885 ITPK1Q13572 414 aa12.82□□□□□ -0.36
AP002856.2-202ENST00000606885 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
AP002856.2-202ENST00000606885 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
AP002856.2-202ENST00000606885 CNTROBQ8N137 903 aa12.82□□□□□ -0.36
AP002856.2-202ENST00000606885 TTLL6Q8N841 843 aa12.82□□□□□ -0.36
AP002856.2-202ENST00000606885 ITGB4P16144 1822 aa12.82□□□□□ -0.36
AP002856.2-202ENST00000606885 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
AP002856.2-202ENST00000606885 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
AP002856.2-202ENST00000606885 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
AP002856.2-202ENST00000606885 PNMA8AQ86V59 439 aaPredicted RBP12.81□□□□□ -0.36
AP002856.2-202ENST00000606885 LTBP1Q14766 1721 aa12.81□□□□□ -0.36
AP002856.2-202ENST00000606885 EVC2Q86UK5 1308 aa12.81□□□□□ -0.36
AP002856.2-202ENST00000606885 RPS6KA4O75676 772 aa12.79□□□□□ -0.36
AP002856.2-202ENST00000606885 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
AP002856.2-202ENST00000606885 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
AP002856.2-202ENST00000606885 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
AP002856.2-202ENST00000606885 CYP4F22Q6NT55 531 aa12.79□□□□□ -0.36
AP002856.2-202ENST00000606885 DDX21Q9NR30 783 aaKnown RBP eCLIP12.79□□□□□ -0.36
AP002856.2-202ENST00000606885 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
AP002856.2-202ENST00000606885 GRM1Q13255 1194 aa12.78□□□□□ -0.36
AP002856.2-202ENST00000606885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.78□□□□□ -0.36
AP002856.2-202ENST00000606885 SLC17A8Q8NDX2 589 aa12.78□□□□□ -0.36
AP002856.2-202ENST00000606885 CUL9Q8IWT3 2517 aa12.77□□□□□ -0.37
AP002856.2-202ENST00000606885 DDR1Q08345 913 aa12.77□□□□□ -0.37
AP002856.2-202ENST00000606885 HACL1Q9UJ83 578 aa12.77□□□□□ -0.37
AP002856.2-202ENST00000606885 LTBP3Q9NS15 1303 aa12.77□□□□□ -0.37
AP002856.2-202ENST00000606885 NME9Q86XW9 330 aa12.76□□□□□ -0.37
AP002856.2-202ENST00000606885 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
AP002856.2-202ENST00000606885 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
AP002856.2-202ENST00000606885 POLRMTO00411 1230 aaKnown RBP12.75□□□□□ -0.37
AP002856.2-202ENST00000606885 CYP27B1O15528 508 aa12.75□□□□□ -0.37
AP002856.2-202ENST00000606885 NKX1-1Q15270 411 aaPredicted RBP12.75□□□□□ -0.37
AP002856.2-202ENST00000606885 MAP1SQ66K74 1059 aaPredicted RBP12.75□□□□□ -0.37
AP002856.2-202ENST00000606885 PITPNM2Q9BZ72 1349 aa12.75□□□□□ -0.37
AP002856.2-202ENST00000606885 CNTNAP4Q9C0A0 1308 aa12.75□□□□□ -0.37
AP002856.2-202ENST00000606885 TMOD3Q9NYL9 352 aa12.75□□□□□ -0.37
AP002856.2-202ENST00000606885 ASAP1Q9ULH1 1129 aa12.75□□□□□ -0.37
AP002856.2-202ENST00000606885 AOC2O75106 756 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 TM4SF1P30408 202 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 HOXC9P31274 260 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 EPHX2P34913 555 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 TLL2Q9Y6L7 1015 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 ADAMTSL1Q8N6G6 1762 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 DLEC1Q9Y238 1755 aa12.74□□□□□ -0.37
AP002856.2-202ENST00000606885 H0YIN7 160 aa12.73□□□□□ -0.37
AP002856.2-202ENST00000606885 AMPHP49418 695 aa12.73□□□□□ -0.37
AP002856.2-202ENST00000606885 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
AP002856.2-202ENST00000606885 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
AP002856.2-202ENST00000606885 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
AP002856.2-202ENST00000606885 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
AP002856.2-202ENST00000606885 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
AP002856.2-202ENST00000606885 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
AP002856.2-202ENST00000606885 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
AP002856.2-202ENST00000606885 MKI67P46013 3256 aaKnown RBP12.72□□□□□ -0.37
AP002856.2-202ENST00000606885 USP42Q9H9J4 1324 aaKnown RBP12.72□□□□□ -0.37
AP002856.2-202ENST00000606885 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
AP002856.2-202ENST00000606885 ADAMTS7Q9UKP4 1686 aa12.72□□□□□ -0.37
AP002856.2-202ENST00000606885 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.37
AP002856.2-202ENST00000606885 C2CD5Q86YS7 1000 aa12.71□□□□□ -0.37
AP002856.2-202ENST00000606885 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
AP002856.2-202ENST00000606885 PDZRN3Q9UPQ7 1066 aa12.71□□□□□ -0.37
AP002856.2-202ENST00000606885 TRPM7Q96QT4 1865 aa12.7□□□□□ -0.38
AP002856.2-202ENST00000606885 SBNO2Q9Y2G9 1366 aa12.69□□□□□ -0.38
AP002856.2-202ENST00000606885 CST9Q5W186 159 aa12.69□□□□□ -0.38
AP002856.2-202ENST00000606885 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
AP002856.2-202ENST00000606885 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
AP002856.2-202ENST00000606885 INSRP06213 1382 aa12.69□□□□□ -0.38
AP002856.2-202ENST00000606885 KDRP35968 1356 aa12.69□□□□□ -0.38
AP002856.2-202ENST00000606885 C21orf2O43822 256 aa12.68□□□□□ -0.38
AP002856.2-202ENST00000606885 PKN2Q16513 984 aaKnown RBP12.68□□□□□ -0.38
AP002856.2-202ENST00000606885 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
AP002856.2-202ENST00000606885 CTU1Q7Z7A3 348 aaKnown RBP12.68□□□□□ -0.38
AP002856.2-202ENST00000606885 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
AP002856.2-202ENST00000606885 USHBP1Q8N6Y0 703 aa12.68□□□□□ -0.38
AP002856.2-202ENST00000606885 SAGE1Q9NXZ1 904 aa12.68□□□□□ -0.38
AP002856.2-202ENST00000606885 COL6A3P12111 3177 aa12.67□□□□□ -0.38
AP002856.2-202ENST00000606885 SZT2Q5T011 3432 aa12.67□□□□□ -0.38
AP002856.2-202ENST00000606885 NOGQ13253 232 aa12.67□□□□□ -0.38
AP002856.2-202ENST00000606885 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
AP002856.2-202ENST00000606885 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
AP002856.2-202ENST00000606885 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
AP002856.2-202ENST00000606885 ZPR1O75312 459 aa12.66□□□□□ -0.38
AP002856.2-202ENST00000606885 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
AP002856.2-202ENST00000606885 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
AP002856.2-202ENST00000606885 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms