RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 BAP1Q92560 729 aa13.58□□□□□ -0.24
CSNK1A1-209ENST00000606299 FAM117AQ9C073 453 aa13.58□□□□□ -0.24
CSNK1A1-209ENST00000606299 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
CSNK1A1-209ENST00000606299 SIAH2O43255 324 aa13.57□□□□□ -0.24
CSNK1A1-209ENST00000606299 ANP32CO43423 234 aa13.57□□□□□ -0.24
CSNK1A1-209ENST00000606299 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
CSNK1A1-209ENST00000606299 TSC1Q92574 1164 aa13.57□□□□□ -0.24
CSNK1A1-209ENST00000606299 MAP10Q9P2G4 905 aa13.57□□□□□ -0.24
CSNK1A1-209ENST00000606299 RTL5Q5HYW3 569 aaPredicted RBP13.56□□□□□ -0.24
CSNK1A1-209ENST00000606299 MYOM1P52179 1685 aa13.56□□□□□ -0.24
CSNK1A1-209ENST00000606299 EIF3AQ14152 1382 aaKnown RBP13.56□□□□□ -0.24
CSNK1A1-209ENST00000606299 TNRQ92752 1358 aa13.56□□□□□ -0.24
CSNK1A1-209ENST00000606299 A2ML1A8K2U0 1454 aa13.55□□□□□ -0.24
CSNK1A1-209ENST00000606299 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
CSNK1A1-209ENST00000606299 ADGRB1O14514 1584 aa13.54□□□□□ -0.24
CSNK1A1-209ENST00000606299 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
CSNK1A1-209ENST00000606299 ALDH1A1P00352 501 aa13.54□□□□□ -0.24
CSNK1A1-209ENST00000606299 VARSP26640 1264 aaKnown RBP13.54□□□□□ -0.24
CSNK1A1-209ENST00000606299 ADAMTSL3P82987 1691 aa13.53□□□□□ -0.24
CSNK1A1-209ENST00000606299 YTHDC1Q96MU7 727 aaKnown RBP13.53□□□□□ -0.24
CSNK1A1-209ENST00000606299 DISP3Q9P2K9 1392 aa13.53□□□□□ -0.24
CSNK1A1-209ENST00000606299 ZFYVE9O95405 1425 aa13.53□□□□□ -0.24
CSNK1A1-209ENST00000606299 ARMC2Q8NEN0 867 aa13.52□□□□□ -0.25
CSNK1A1-209ENST00000606299 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.25
CSNK1A1-209ENST00000606299 ALKQ9UM73 1620 aa13.52□□□□□ -0.25
CSNK1A1-209ENST00000606299 NRXN3Q9Y4C0 1643 aa13.51□□□□□ -0.25
CSNK1A1-209ENST00000606299 ASXL1Q8IXJ9 1541 aa13.51□□□□□ -0.25
CSNK1A1-209ENST00000606299 RIMS2Q9UQ26 1411 aa13.51□□□□□ -0.25
CSNK1A1-209ENST00000606299 MPNDQ8N594 471 aa13.51□□□□□ -0.25
CSNK1A1-209ENST00000606299 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
CSNK1A1-209ENST00000606299 TMF1P82094 1093 aa13.5□□□□□ -0.25
CSNK1A1-209ENST00000606299 HPS1Q92902 700 aa13.5□□□□□ -0.25
CSNK1A1-209ENST00000606299 TESK2Q96S53 571 aa13.5□□□□□ -0.25
CSNK1A1-209ENST00000606299 SETD1BQ9UPS6 1966 aaKnown RBP13.49□□□□□ -0.25
CSNK1A1-209ENST00000606299 PPP2R2DQ66LE6 453 aa13.49□□□□□ -0.25
CSNK1A1-209ENST00000606299 WASF2Q9Y6W5 498 aa13.49□□□□□ -0.25
CSNK1A1-209ENST00000606299 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
CSNK1A1-209ENST00000606299 KNDC1Q76NI1 1749 aa13.48□□□□□ -0.25
CSNK1A1-209ENST00000606299 CEBPAP49715 358 aaPredicted RBP13.48□□□□□ -0.25
CSNK1A1-209ENST00000606299 NBPF14Q5TI25 921 aa13.48□□□□□ -0.25
CSNK1A1-209ENST00000606299 TMEM132EQ6IEE7 984 aa13.47□□□□□ -0.25
CSNK1A1-209ENST00000606299 FAM174AQ8TBP5 190 aa13.47□□□□□ -0.25
CSNK1A1-209ENST00000606299 TLL2Q9Y6L7 1015 aa13.47□□□□□ -0.25
CSNK1A1-209ENST00000606299 ZNF142P52746 1687 aaPredicted RBP13.47□□□□□ -0.25
CSNK1A1-209ENST00000606299 BPHLQ86WA6 291 aaPredicted RBP13.46□□□□□ -0.25
CSNK1A1-209ENST00000606299 PROCA1Q8NCQ7 364 aaPredicted RBP13.46□□□□□ -0.25
CSNK1A1-209ENST00000606299 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
CSNK1A1-209ENST00000606299 TRAK1Q9UPV9 953 aa13.46□□□□□ -0.25
CSNK1A1-209ENST00000606299 POTECB2RU33 542 aa13.45□□□□□ -0.26
CSNK1A1-209ENST00000606299 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
CSNK1A1-209ENST00000606299 NEUROD2Q15784 382 aa13.45□□□□□ -0.26
CSNK1A1-209ENST00000606299 DACH1Q9UI36 760 aa13.45□□□□□ -0.26
CSNK1A1-209ENST00000606299 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
CSNK1A1-209ENST00000606299 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.262e-11■□□□□ 9
CSNK1A1-209ENST00000606299 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
CSNK1A1-209ENST00000606299 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
CSNK1A1-209ENST00000606299 CNGB1Q14028 1251 aaPredicted RBP13.43□□□□□ -0.26
CSNK1A1-209ENST00000606299 FOXJ1Q92949 421 aa13.43□□□□□ -0.26
CSNK1A1-209ENST00000606299 ATP13A2Q9NQ11 1180 aa13.43□□□□□ -0.26
CSNK1A1-209ENST00000606299 CEP170BQ9Y4F5 1589 aaPredicted RBP13.43□□□□□ -0.26
CSNK1A1-209ENST00000606299 PTPRMP28827 1452 aa13.42□□□□□ -0.26
CSNK1A1-209ENST00000606299 AGERQ15109 404 aa13.42□□□□□ -0.26
CSNK1A1-209ENST00000606299 CDCA8Q53HL2 280 aa13.42□□□□□ -0.26
CSNK1A1-209ENST00000606299 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
CSNK1A1-209ENST00000606299 YTHDC2Q9H6S0 1430 aaKnown RBP13.41□□□□□ -0.26
CSNK1A1-209ENST00000606299 PRKRIP1Q9H875 184 aaPredicted RBP13.41□□□□□ -0.26
CSNK1A1-209ENST00000606299 STK26Q9P289 416 aa13.41□□□□□ -0.26
CSNK1A1-209ENST00000606299 GMPR2Q9P2T1 348 aaKnown RBP13.41□□□□□ -0.26
CSNK1A1-209ENST00000606299 TMEM2Q9UHN6 1383 aa13.41□□□□□ -0.26
CSNK1A1-209ENST00000606299 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
CSNK1A1-209ENST00000606299 CDK15Q96Q40 435 aa13.4□□□□□ -0.26
CSNK1A1-209ENST00000606299 SLIT1O75093 1534 aa13.39□□□□□ -0.27
CSNK1A1-209ENST00000606299 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
CSNK1A1-209ENST00000606299 ADH1CP00326 375 aa13.39□□□□□ -0.27
CSNK1A1-209ENST00000606299 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
CSNK1A1-209ENST00000606299 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
CSNK1A1-209ENST00000606299 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
CSNK1A1-209ENST00000606299 NNTQ13423 1086 aa13.38□□□□□ -0.27
CSNK1A1-209ENST00000606299 C4orf48Q5BLP8 95 aa13.38□□□□□ -0.27
CSNK1A1-209ENST00000606299 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
CSNK1A1-209ENST00000606299 C1QTNF2Q9BXJ5 285 aa13.38□□□□□ -0.27
CSNK1A1-209ENST00000606299 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
CSNK1A1-209ENST00000606299 ZNF775Q96BV0 537 aaPredicted RBP13.37□□□□□ -0.27
CSNK1A1-209ENST00000606299 PCMTD1Q96MG8 357 aaPredicted RBP13.37□□□□□ -0.27
CSNK1A1-209ENST00000606299 PANK3Q9H999 370 aa13.37□□□□□ -0.27
CSNK1A1-209ENST00000606299 ZC3H4Q9UPT8 1303 aaKnown RBP13.37□□□□□ -0.27
CSNK1A1-209ENST00000606299 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
CSNK1A1-209ENST00000606299 CAPN5O15484 640 aaPredicted RBP13.36□□□□□ -0.27
CSNK1A1-209ENST00000606299 SAFB2Q14151 953 aaKnown RBP eCLIP13.36□□□□□ -0.27
CSNK1A1-209ENST00000606299 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
CSNK1A1-209ENST00000606299 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
CSNK1A1-209ENST00000606299 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
CSNK1A1-209ENST00000606299 CPS1P31327 1500 aa13.35□□□□□ -0.27
CSNK1A1-209ENST00000606299 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
CSNK1A1-209ENST00000606299 AP1G2O75843 785 aa13.35□□□□□ -0.27
CSNK1A1-209ENST00000606299 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
CSNK1A1-209ENST00000606299 TRIM47Q96LD4 638 aa13.35□□□□□ -0.27
CSNK1A1-209ENST00000606299 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
CSNK1A1-209ENST00000606299 ITSN1Q15811 1721 aa13.35□□□□□ -0.27
CSNK1A1-209ENST00000606299 LRPPRCP42704 1394 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms