RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 CHRNA5P30532 468 aa24.49■■□□□ 1.51
CCDC12-213ENST00000605875 TOMM70O94826 608 aa24.48■■□□□ 1.51
CCDC12-213ENST00000605875 NMRK2Q9NPI5 230 aa24.48■■□□□ 1.51
CCDC12-213ENST00000605875 KCPQ6ZWJ8 1503 aa24.46■■□□□ 1.51
CCDC12-213ENST00000605875 IFFO2Q5TF58 517 aa24.46■■□□□ 1.51
CCDC12-213ENST00000605875 NARFQ9UHQ1 456 aa24.46■■□□□ 1.51
CCDC12-213ENST00000605875 ZBTB1Q9Y2K1 713 aa24.46■■□□□ 1.51
CCDC12-213ENST00000605875 COL15A1P39059 1388 aa24.45■■□□□ 1.5
CCDC12-213ENST00000605875 VSIG10Q8N0Z9 540 aa24.45■■□□□ 1.5
CCDC12-213ENST00000605875 APLP1P51693 650 aa24.44■■□□□ 1.5
CCDC12-213ENST00000605875 NFIXQ14938 502 aa24.44■■□□□ 1.5
CCDC12-213ENST00000605875 AFDNP55196 1824 aaKnown RBP24.43■■□□□ 1.5
CCDC12-213ENST00000605875 RNF181Q9P0P0 153 aa24.43■■□□□ 1.5
CCDC12-213ENST00000605875 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
CCDC12-213ENST00000605875 TTC5Q8N0Z6 440 aa24.41■■□□□ 1.5
CCDC12-213ENST00000605875 BCL2L12Q9HB09 334 aa24.41■■□□□ 1.5
CCDC12-213ENST00000605875 SBF1O95248 1867 aa24.41■■□□□ 1.5
CCDC12-213ENST00000605875 UBR2Q8IWV8 1755 aa24.4■■□□□ 1.5
CCDC12-213ENST00000605875 SERPINB2P05120 415 aa24.4■■□□□ 1.5
CCDC12-213ENST00000605875 C16orf71Q8IYS4 520 aaPredicted RBP24.4■■□□□ 1.5
CCDC12-213ENST00000605875 KDM2BQ8NHM5 1336 aa24.39■■□□□ 1.5
CCDC12-213ENST00000605875 NRXN2Q9P2S2 1712 aa24.39■■□□□ 1.5
CCDC12-213ENST00000605875 U2SURPO15042 1029 aaKnown RBP24.39■■□□□ 1.49
CCDC12-213ENST00000605875 RBM46Q8TBY0 533 aaKnown RBP24.39■■□□□ 1.49
CCDC12-213ENST00000605875 STARD3NLO95772 234 aa24.38■■□□□ 1.49
CCDC12-213ENST00000605875 GNAT3A8MTJ3 354 aa24.36■■□□□ 1.49
CCDC12-213ENST00000605875 PPP2R1AP30153 589 aa24.36■■□□□ 1.49
CCDC12-213ENST00000605875 TEFQ10587 303 aa24.36■■□□□ 1.49
CCDC12-213ENST00000605875 IL17REQ8NFR9 667 aa24.36■■□□□ 1.49
CCDC12-213ENST00000605875 GAS2L2Q8NHY3 880 aa24.36■■□□□ 1.49
CCDC12-213ENST00000605875 A0A087WZG4 1122 aa24.35■■□□□ 1.49
CCDC12-213ENST00000605875 EIF5P55010 431 aaKnown RBP24.35■■□□□ 1.49
CCDC12-213ENST00000605875 BICDL1Q6ZP65 573 aa24.35■■□□□ 1.49
CCDC12-213ENST00000605875 CFAP53Q96M91 514 aa24.35■■□□□ 1.49
CCDC12-213ENST00000605875 RRAGCQ9HB90 399 aa24.35■■□□□ 1.49
CCDC12-213ENST00000605875 RASSF7Q02833 373 aa24.34■■□□□ 1.49
CCDC12-213ENST00000605875 ZNF790Q6PG37 636 aa24.34■■□□□ 1.49
CCDC12-213ENST00000605875 C2CD5Q86YS7 1000 aa24.34■■□□□ 1.49
CCDC12-213ENST00000605875 DNAJC5GQ8N7S2 189 aa24.34■■□□□ 1.49
CCDC12-213ENST00000605875 ZNF496Q96IT1 587 aaPredicted RBP24.34■■□□□ 1.49
CCDC12-213ENST00000605875 DLEC1Q9Y238 1755 aa24.34■■□□□ 1.49
CCDC12-213ENST00000605875 TTLL6Q8N841 843 aa24.33■■□□□ 1.49
CCDC12-213ENST00000605875 TEX13AQ9BXU3 409 aaPredicted RBP24.33■■□□□ 1.49
CCDC12-213ENST00000605875 HEG1Q9ULI3 1381 aa24.32■■□□□ 1.48
CCDC12-213ENST00000605875 FSTL1Q12841 308 aa24.32■■□□□ 1.48
CCDC12-213ENST00000605875 TNRC6CQ9HCJ0 1690 aaKnown RBP24.31■■□□□ 1.48
CCDC12-213ENST00000605875 H0YIN7 160 aa24.31■■□□□ 1.48
CCDC12-213ENST00000605875 SIPA1L3O60292 1781 aaPredicted RBP24.31■■□□□ 1.48
CCDC12-213ENST00000605875 CARMIL3Q8ND23 1372 aa24.3■■□□□ 1.48
CCDC12-213ENST00000605875 WDR90Q96KV7 1748 aa24.3■■□□□ 1.48
CCDC12-213ENST00000605875 LMNB1P20700 586 aa24.3■■□□□ 1.48
CCDC12-213ENST00000605875 TBC1D9BQ66K14 1250 aa24.3■■□□□ 1.48
CCDC12-213ENST00000605875 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
CCDC12-213ENST00000605875 TBC1D2BQ9UPU7 963 aa24.29■■□□□ 1.48
CCDC12-213ENST00000605875 ZC3H4Q9UPT8 1303 aaKnown RBP24.29■■□□□ 1.48
CCDC12-213ENST00000605875 FMNL2Q96PY5 1086 aa24.28■■□□□ 1.48
CCDC12-213ENST00000605875 CCDC88AQ3V6T2 1871 aa24.28■■□□□ 1.48
CCDC12-213ENST00000605875 IL6STP40189 918 aaPredicted RBP24.27■■□□□ 1.48
CCDC12-213ENST00000605875 PRELPP51888 382 aa24.27■■□□□ 1.48
CCDC12-213ENST00000605875 A1BGP04217 495 aa24.26■■□□□ 1.47
CCDC12-213ENST00000605875 PRKAR2BP31323 418 aa24.26■■□□□ 1.47
CCDC12-213ENST00000605875 PHACTR3Q96KR7 559 aa24.26■■□□□ 1.47
CCDC12-213ENST00000605875 RSPH6AQ9H0K4 717 aa24.26■■□□□ 1.47
CCDC12-213ENST00000605875 SCN7AQ01118 1682 aa24.26■■□□□ 1.47
CCDC12-213ENST00000605875 CEMIPQ8WUJ3 1361 aa24.26■■□□□ 1.47
CCDC12-213ENST00000605875 ANKRD31Q8N7Z5 1873 aa24.26■■□□□ 1.47
CCDC12-213ENST00000605875 BTBD11A6QL63 1104 aa24.25■■□□□ 1.47
CCDC12-213ENST00000605875 HTRA3P83110 453 aa24.25■■□□□ 1.47
CCDC12-213ENST00000605875 NPM2Q86SE8 214 aaKnown RBP24.25■■□□□ 1.47
CCDC12-213ENST00000605875 ZNF622Q969S3 477 aaKnown RBP eCLIP24.25■■□□□ 1.473e-8■□□□□ 10.3
CCDC12-213ENST00000605875 NUDCQ9Y266 331 aa24.25■■□□□ 1.47
CCDC12-213ENST00000605875 GLTPD2A6NH11 291 aa24.24■■□□□ 1.47
CCDC12-213ENST00000605875 KCNQ3O43525 872 aa24.24■■□□□ 1.47
CCDC12-213ENST00000605875 PDE6BP35913 854 aa24.24■■□□□ 1.47
CCDC12-213ENST00000605875 PRR5LQ6MZQ0 368 aa24.24■■□□□ 1.47
CCDC12-213ENST00000605875 CCDC24Q8N4L8 307 aa24.24■■□□□ 1.47
CCDC12-213ENST00000605875 SMC1BQ8NDV3 1235 aa24.24■■□□□ 1.47
CCDC12-213ENST00000605875 BRIP1Q9BX63 1249 aa24.24■■□□□ 1.47
CCDC12-213ENST00000605875 PDZRN3Q9UPQ7 1066 aa24.24■■□□□ 1.47
CCDC12-213ENST00000605875 NFKBIEO00221 500 aa24.23■■□□□ 1.47
CCDC12-213ENST00000605875 U2AF1L5P0DN76 240 aaPredicted RBP24.23■■□□□ 1.47
CCDC12-213ENST00000605875 U2AF1Q01081 240 aaKnown RBP eCLIP24.23■■□□□ 1.47
CCDC12-213ENST00000605875 KLRG1Q96E93 195 aa24.22■■□□□ 1.47
CCDC12-213ENST00000605875 TIAM2Q8IVF5 1701 aa24.21■■□□□ 1.47
CCDC12-213ENST00000605875 CAMTA2O94983 1202 aa24.21■■□□□ 1.47
CCDC12-213ENST00000605875 VEGFAP15692 232 aaPredicted RBP24.21■■□□□ 1.47
CCDC12-213ENST00000605875 SETDB2Q96T68 719 aa24.21■■□□□ 1.47
CCDC12-213ENST00000605875 ZNF219Q9P2Y4 722 aaPredicted RBP24.21■■□□□ 1.47
CCDC12-213ENST00000605875 NPHP1O15259 732 aa24.2■■□□□ 1.46
CCDC12-213ENST00000605875 C21orf2O43822 256 aa24.2■■□□□ 1.46
CCDC12-213ENST00000605875 COL11A2P13942 1736 aaPredicted RBP24.19■■□□□ 1.46
CCDC12-213ENST00000605875 DZIP3Q86Y13 1208 aaKnown RBP24.19■■□□□ 1.46
CCDC12-213ENST00000605875 USP16Q9Y5T5 823 aa24.19■■□□□ 1.46
CCDC12-213ENST00000605875 CNBD1Q8NA66 436 aa24.18■■□□□ 1.46
CCDC12-213ENST00000605875 RTF1Q92541 710 aaKnown RBP24.18■■□□□ 1.46
CCDC12-213ENST00000605875 PIP4K2AP48426 406 aaPredicted RBP24.17■■□□□ 1.46
CCDC12-213ENST00000605875 ST5P78524 1137 aa24.17■■□□□ 1.46
CCDC12-213ENST00000605875 BCORQ6W2J9 1755 aa24.16■■□□□ 1.46
CCDC12-213ENST00000605875 FER1L6Q2WGJ9 1857 aa24.16■■□□□ 1.46
CCDC12-213ENST00000605875 DDX10Q13206 875 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms