RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ATP2B1P20020 1258 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 CA8P35219 290 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 FMNL3Q8IVF7 1028 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 GOLGA6L1Q8N7Z2 621 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 H3BRB1 525 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 CCDC70Q6NSX1 233 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 STAG1Q8WVM7 1258 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 TUT1Q9H6E5 874 aaKnown RBP8.58□□□□□ -1.04
TUBE1-207ENST00000604689 RABL2BQ9UNT1 228 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 FRMPD1Q5SYB0 1578 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 NEURL4Q96JN8 1562 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 TMCO5BA8MYB1 307 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 TIGD1Q96MW7 591 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 COL4A3BPQ9Y5P4 624 aa8.58□□□□□ -1.04
TUBE1-207ENST00000604689 DEPDC5O75140 1603 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 ECEL1O95672 775 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 IBSPP21815 317 aaPredicted RBP8.57□□□□□ -1.04
TUBE1-207ENST00000604689 USP5P45974 858 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 PPP1R18Q6NYC8 613 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 ANKRD23Q86SG2 305 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 TRIML1Q8N9V2 468 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 GRIN2AQ12879 1464 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 ABCD1P33897 745 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 FBXO33Q7Z6M2 555 aa8.57□□□□□ -1.04
TUBE1-207ENST00000604689 CCP110O43303 1012 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 MAPK1P28482 360 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 PUS10Q3MIT2 529 aaKnown RBP8.56□□□□□ -1.04
TUBE1-207ENST00000604689 UHMK1Q8TAS1 419 aaKnown RBP8.56□□□□□ -1.04
TUBE1-207ENST00000604689 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 JDP2Q8WYK2 163 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 MPHOSPH6Q99547 160 aaKnown RBP8.56□□□□□ -1.04
TUBE1-207ENST00000604689 XRCC6P12956 609 aaKnown RBP eCLIP8.56□□□□□ -1.04
TUBE1-207ENST00000604689 FAM160A1Q05DH4 1040 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 SDR16C5Q8N3Y7 309 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 TSR2Q969E8 191 aaKnown RBP8.56□□□□□ -1.04
TUBE1-207ENST00000604689 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 NOVA2Q9UNW9 492 aaKnown RBP8.56□□□□□ -1.04
TUBE1-207ENST00000604689 DDX49Q9Y6V7 483 aaKnown RBP8.56□□□□□ -1.04
TUBE1-207ENST00000604689 ITFG2Q969R8 447 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 NCAPGQ9BPX3 1015 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 NBPF3Q9H094 633 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 TSPYL1Q9H0U9 437 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 IFT57Q9NWB7 429 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 NUB1Q9Y5A7 615 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 PCDHGB7Q9Y5F8 929 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 FHAD1B1AJZ9 1412 aa8.56□□□□□ -1.04
TUBE1-207ENST00000604689 ZSCAN20P17040 1043 aaPredicted RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 WDR75Q8IWA0 830 aaKnown RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 ZNF710Q8N1W2 664 aa8.55□□□□□ -1.04
TUBE1-207ENST00000604689 CXorf56Q9H5V9 222 aa8.55□□□□□ -1.04
TUBE1-207ENST00000604689 HTATSF1O43719 755 aaKnown RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 ZRANB2O95218 330 aaKnown RBP eCLIP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 CAPN2P17655 700 aa8.55□□□□□ -1.04
TUBE1-207ENST00000604689 TMEM259Q4ZIN3 620 aa8.55□□□□□ -1.04
TUBE1-207ENST00000604689 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 NOP9Q86U38 636 aaKnown RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 RAVER1Q8IY67 606 aaKnown RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 PNISRQ8TF01 805 aaKnown RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 GJD4Q96KN9 370 aaPredicted RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 ZCCHC11Q5TAX3 1644 aaKnown RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 WDR7Q9Y4E6 1490 aa8.55□□□□□ -1.04
TUBE1-207ENST00000604689 ZNF142P52746 1687 aaPredicted RBP8.55□□□□□ -1.04
TUBE1-207ENST00000604689 SEC24BO95487 1268 aa8.55□□□□□ -1.04
TUBE1-207ENST00000604689 C11orf96Q7Z7L8 435 aa8.55□□□□□ -1.04
TUBE1-207ENST00000604689 TMEM87AQ8NBN3 555 aa8.55□□□□□ -1.04
TUBE1-207ENST00000604689 PTPRKQ15262 1439 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 CCDC85CA6NKD9 419 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 RPS6KC1Q96S38 1066 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 ITSN2Q9NZM3 1697 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 NEFHP12036 1026 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 RPUSD2Q8IZ73 545 aaKnown RBP8.54□□□□□ -1.04
TUBE1-207ENST00000604689 TINF2Q9BSI4 451 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 UPF2Q9HAU5 1272 aaKnown RBP8.54□□□□□ -1.04
TUBE1-207ENST00000604689 V9GYY5 206 aaPredicted RBP8.54□□□□□ -1.04
TUBE1-207ENST00000604689 CCDC18Q5T9S5 1454 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 DISP1Q96F81 1524 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 CCDC175P0C221 793 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 ERCC3P19447 782 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 TBX4P57082 545 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 C8orf34Q49A92 452 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 IRF2BPLQ9H1B7 796 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 R3HCC1Q9Y3T6 440 aaKnown RBP8.54□□□□□ -1.04
TUBE1-207ENST00000604689 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
TUBE1-207ENST00000604689 LIG1P18858 919 aa8.53□□□□□ -1.04
TUBE1-207ENST00000604689 ALG2Q9H553 416 aa8.53□□□□□ -1.04
TUBE1-207ENST00000604689 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
TUBE1-207ENST00000604689 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
TUBE1-207ENST00000604689 NDUFV2P19404 249 aa8.53□□□□□ -1.04
TUBE1-207ENST00000604689 EVA1CP58658 441 aa8.53□□□□□ -1.04
TUBE1-207ENST00000604689 KIAA2012Q0VF49 1180 aa8.53□□□□□ -1.04
TUBE1-207ENST00000604689 NUTM2DQ5VT03 806 aaPredicted RBP8.53□□□□□ -1.04
TUBE1-207ENST00000604689 IFNL1Q8IU54 200 aa8.53□□□□□ -1.04
TUBE1-207ENST00000604689 NUTM2AQ8IVF1 878 aaPredicted RBP8.53□□□□□ -1.04
TUBE1-207ENST00000604689 S100BP04271 92 aaPredicted RBP8.53□□□□□ -1.04
TUBE1-207ENST00000604689 LDLRAD1Q5T700 205 aa8.53□□□□□ -1.04
TUBE1-207ENST00000604689 CCDC61Q9Y6R9 512 aa8.53□□□□□ -1.04
TUBE1-207ENST00000604689 ELL2O00472 640 aaPredicted RBP8.52□□□□□ -1.05
TUBE1-207ENST00000604689 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
TUBE1-207ENST00000604689 USP25Q9UHP3 1055 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms