RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 IL25Q9H293 177 aa18.68■□□□□ 0.58
FGFR2-222ENST00000604236 ABCC4O15439 1325 aa18.68■□□□□ 0.58
FGFR2-222ENST00000604236 CASTP20810 708 aaKnown RBP18.68■□□□□ 0.58
FGFR2-222ENST00000604236 DDX11Q96FC9 970 aa18.68■□□□□ 0.58
FGFR2-222ENST00000604236 ATP7BP35670 1465 aa18.68■□□□□ 0.58
FGFR2-222ENST00000604236 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
FGFR2-222ENST00000604236 COPS6Q7L5N1 327 aa18.67■□□□□ 0.58
FGFR2-222ENST00000604236 SOS1Q07889 1333 aaPredicted RBP18.67■□□□□ 0.58
FGFR2-222ENST00000604236 RHPN1Q8TCX5 695 aa18.67■□□□□ 0.58
FGFR2-222ENST00000604236 JAKMIP1Q96N16 626 aaKnown RBP18.67■□□□□ 0.58
FGFR2-222ENST00000604236 RABEP1Q15276 862 aa18.67■□□□□ 0.58
FGFR2-222ENST00000604236 ARHGAP45Q92619 1136 aa18.67■□□□□ 0.58
FGFR2-222ENST00000604236 TMX3Q96JJ7 454 aa18.67■□□□□ 0.58
FGFR2-222ENST00000604236 RTL1A6NKG5 1358 aa18.66■□□□□ 0.58
FGFR2-222ENST00000604236 NASPP49321 788 aaPredicted RBP18.66■□□□□ 0.58
FGFR2-222ENST00000604236 CHST3Q7LGC8 479 aa18.65■□□□□ 0.58
FGFR2-222ENST00000604236 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
FGFR2-222ENST00000604236 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
FGFR2-222ENST00000604236 KIF2CQ99661 725 aa18.65■□□□□ 0.58
FGFR2-222ENST00000604236 GPTP24298 496 aa18.65■□□□□ 0.58
FGFR2-222ENST00000604236 NEXNQ0ZGT2 675 aa18.65■□□□□ 0.58
FGFR2-222ENST00000604236 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
FGFR2-222ENST00000604236 FLT4P35916 1363 aa18.64■□□□□ 0.58
FGFR2-222ENST00000604236 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
FGFR2-222ENST00000604236 TAF7LQ5H9L4 462 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 TFIP11Q9UBB9 837 aaKnown RBP18.63■□□□□ 0.57
FGFR2-222ENST00000604236 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 GUCY1B3Q02153 619 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 DDX46Q7L014 1031 aaKnown RBP18.63■□□□□ 0.57
FGFR2-222ENST00000604236 ZNF830Q96NB3 372 aaPredicted RBP18.63■□□□□ 0.57
FGFR2-222ENST00000604236 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 PLEKHG3A1L390 1219 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 CAMK4Q16566 473 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 CCDC129Q6ZRS4 1044 aa18.63■□□□□ 0.57
FGFR2-222ENST00000604236 FAM227BQ96M60 508 aa18.62■□□□□ 0.57
FGFR2-222ENST00000604236 GOLGA6L4A6NEF3 574 aa18.62■□□□□ 0.57
FGFR2-222ENST00000604236 CABP4P57796 275 aa18.62■□□□□ 0.57
FGFR2-222ENST00000604236 TLR7Q9NYK1 1049 aaKnown RBP18.62■□□□□ 0.57
FGFR2-222ENST00000604236 CPSF1Q10570 1443 aaKnown RBP18.62■□□□□ 0.57
FGFR2-222ENST00000604236 FKBP4Q02790 459 aaKnown RBP eCLIP18.61■□□□□ 0.57
FGFR2-222ENST00000604236 ESYT1Q9BSJ8 1104 aa18.61■□□□□ 0.57
FGFR2-222ENST00000604236 ATP8B2P98198 1209 aa18.61■□□□□ 0.57
FGFR2-222ENST00000604236 SMC3Q9UQE7 1217 aa18.61■□□□□ 0.57
FGFR2-222ENST00000604236 MSNP26038 577 aaKnown RBP18.6■□□□□ 0.57
FGFR2-222ENST00000604236 ZNF594Q96JF6 807 aaPredicted RBP18.6■□□□□ 0.57
FGFR2-222ENST00000604236 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
FGFR2-222ENST00000604236 AK9Q5TCS8 1911 aa18.6■□□□□ 0.57
FGFR2-222ENST00000604236 RBM10P98175 930 aaKnown RBP18.6■□□□□ 0.57
FGFR2-222ENST00000604236 TOMM22Q9NS69 142 aa18.6■□□□□ 0.57
FGFR2-222ENST00000604236 CHMLP26374 656 aa18.6■□□□□ 0.57
FGFR2-222ENST00000604236 BICC1Q9H694 974 aaKnown RBP18.6■□□□□ 0.57
FGFR2-222ENST00000604236 PTPRCP08575 1304 aa18.59■□□□□ 0.57
FGFR2-222ENST00000604236 RBM25P49756 843 aaKnown RBP18.59■□□□□ 0.57
FGFR2-222ENST00000604236 TBX22Q9Y458 520 aa18.59■□□□□ 0.57
FGFR2-222ENST00000604236 A0A087WZG4 1122 aa18.59■□□□□ 0.57
FGFR2-222ENST00000604236 CNTROBQ8N137 903 aa18.59■□□□□ 0.57
FGFR2-222ENST00000604236 NUTM2BA6NNL0 878 aaPredicted RBP18.58■□□□□ 0.57
FGFR2-222ENST00000604236 NUTM2EB1AL46 878 aaPredicted RBP18.58■□□□□ 0.57
FGFR2-222ENST00000604236 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.57
FGFR2-222ENST00000604236 PRIM1P49642 420 aaKnown RBP18.58■□□□□ 0.57
FGFR2-222ENST00000604236 NUTM2AQ8IVF1 878 aaPredicted RBP18.58■□□□□ 0.57
FGFR2-222ENST00000604236 RASEFQ8IZ41 740 aa18.58■□□□□ 0.57
FGFR2-222ENST00000604236 SPC24Q8NBT2 197 aa18.58■□□□□ 0.57
FGFR2-222ENST00000604236 ZNF496Q96IT1 587 aaPredicted RBP18.58■□□□□ 0.57
FGFR2-222ENST00000604236 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
FGFR2-222ENST00000604236 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.56
FGFR2-222ENST00000604236 GADD45BO75293 160 aaPredicted RBP18.58■□□□□ 0.56
FGFR2-222ENST00000604236 HAND2P61296 217 aa18.58■□□□□ 0.56
FGFR2-222ENST00000604236 TIMM10P62072 90 aa18.58■□□□□ 0.56
FGFR2-222ENST00000604236 A1BGP04217 495 aa18.57■□□□□ 0.56
FGFR2-222ENST00000604236 SEC62Q99442 399 aaKnown RBP18.57■□□□□ 0.56
FGFR2-222ENST00000604236 CDK12Q9NYV4 1490 aaPredicted RBP18.57■□□□□ 0.56
FGFR2-222ENST00000604236 AGLP35573 1532 aa18.57■□□□□ 0.56
FGFR2-222ENST00000604236 EIF4A1P60842 406 aaKnown RBP18.57■□□□□ 0.56
FGFR2-222ENST00000604236 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
FGFR2-222ENST00000604236 MRE11P49959 708 aa18.57■□□□□ 0.56
FGFR2-222ENST00000604236 WASHC4Q2M389 1173 aa18.57■□□□□ 0.56
FGFR2-222ENST00000604236 USP6P35125 1406 aa18.56■□□□□ 0.56
FGFR2-222ENST00000604236 APPP05067 770 aa18.56■□□□□ 0.56
FGFR2-222ENST00000604236 SUCLG2Q96I99 432 aa18.56■□□□□ 0.56
FGFR2-222ENST00000604236 DBF4Q9UBU7 674 aaPredicted RBP18.56■□□□□ 0.56
FGFR2-222ENST00000604236 CNPY2Q9Y2B0 182 aa18.56■□□□□ 0.56
FGFR2-222ENST00000604236 VIRMAQ69YN4 1812 aaKnown RBP18.56■□□□□ 0.56
FGFR2-222ENST00000604236 ADAMTS2O95450 1211 aa18.56■□□□□ 0.56
FGFR2-222ENST00000604236 NUCB2P80303 420 aa18.55■□□□□ 0.56
FGFR2-222ENST00000604236 PTH1RQ03431 593 aa18.55■□□□□ 0.56
FGFR2-222ENST00000604236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.55■□□□□ 0.56
FGFR2-222ENST00000604236 RAB3GAP1Q15042 981 aa18.55■□□□□ 0.56
FGFR2-222ENST00000604236 IP6K1Q92551 441 aa18.55■□□□□ 0.56
FGFR2-222ENST00000604236 KIF1BPQ96EK5 621 aa18.55■□□□□ 0.56
FGFR2-222ENST00000604236 CCT2P78371 535 aaKnown RBP18.54■□□□□ 0.56
FGFR2-222ENST00000604236 DRC7Q8IY82 874 aa18.54■□□□□ 0.56
FGFR2-222ENST00000604236 PIK3R4Q99570 1358 aa18.54■□□□□ 0.56
FGFR2-222ENST00000604236 DDX58O95786 925 aaKnown RBP18.54■□□□□ 0.56
FGFR2-222ENST00000604236 GPATCH3Q96I76 525 aa18.54■□□□□ 0.56
FGFR2-222ENST00000604236 MAP3K5Q99683 1374 aa18.54■□□□□ 0.56
FGFR2-222ENST00000604236 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms