RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
HERPUD2-207ENST00000603731 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
HERPUD2-207ENST00000603731 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
HERPUD2-207ENST00000603731 HDGFL1Q5TGJ6 251 aa16.15■□□□□ 0.18
HERPUD2-207ENST00000603731 FAM196AQ6ZSG2 479 aa16.15■□□□□ 0.18
HERPUD2-207ENST00000603731 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
HERPUD2-207ENST00000603731 ARHGAP45Q92619 1136 aa16.15■□□□□ 0.18
HERPUD2-207ENST00000603731 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
HERPUD2-207ENST00000603731 TRIM27P14373 513 aa16.14■□□□□ 0.17
HERPUD2-207ENST00000603731 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
HERPUD2-207ENST00000603731 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
HERPUD2-207ENST00000603731 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
HERPUD2-207ENST00000603731 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
HERPUD2-207ENST00000603731 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
HERPUD2-207ENST00000603731 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
HERPUD2-207ENST00000603731 FMNL2Q96PY5 1086 aa16.13■□□□□ 0.17
HERPUD2-207ENST00000603731 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
HERPUD2-207ENST00000603731 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
HERPUD2-207ENST00000603731 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
HERPUD2-207ENST00000603731 DOT1LQ8TEK3 1739 aa16.12■□□□□ 0.17
HERPUD2-207ENST00000603731 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
HERPUD2-207ENST00000603731 PTPRCP08575 1304 aa16.12■□□□□ 0.17
HERPUD2-207ENST00000603731 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
HERPUD2-207ENST00000603731 C5P01031 1676 aa16.11■□□□□ 0.17
HERPUD2-207ENST00000603731 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
HERPUD2-207ENST00000603731 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
HERPUD2-207ENST00000603731 RLBP1P12271 317 aa16.1■□□□□ 0.17
HERPUD2-207ENST00000603731 MVPQ14764 893 aaKnown RBP16.1■□□□□ 0.17
HERPUD2-207ENST00000603731 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
HERPUD2-207ENST00000603731 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
HERPUD2-207ENST00000603731 SNRPA1P09661 255 aaKnown RBP16.09■□□□□ 0.17
HERPUD2-207ENST00000603731 ITPRIPQ8IWB1 547 aa16.09■□□□□ 0.17
HERPUD2-207ENST00000603731 SYTL4Q96C24 671 aaPredicted RBP16.09■□□□□ 0.17
HERPUD2-207ENST00000603731 ZNF496Q96IT1 587 aaPredicted RBP16.09■□□□□ 0.17
HERPUD2-207ENST00000603731 AAMPQ13685 434 aa16.08■□□□□ 0.16
HERPUD2-207ENST00000603731 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
HERPUD2-207ENST00000603731 MARCH10Q8NA82 808 aaPredicted RBP16.08■□□□□ 0.16
HERPUD2-207ENST00000603731 CHMP4BQ9H444 224 aaKnown RBP16.08■□□□□ 0.16
HERPUD2-207ENST00000603731 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.16
HERPUD2-207ENST00000603731 DDX19BQ9UMR2 479 aa16.08■□□□□ 0.16
HERPUD2-207ENST00000603731 PIGBQ92521 554 aa16.07■□□□□ 0.16
HERPUD2-207ENST00000603731 ABCC4O15439 1325 aa16.06■□□□□ 0.16
HERPUD2-207ENST00000603731 PRIM1P49642 420 aaKnown RBP16.06■□□□□ 0.16
HERPUD2-207ENST00000603731 FLIIQ13045 1269 aa16.06■□□□□ 0.16
HERPUD2-207ENST00000603731 FKBP5Q13451 457 aaPredicted RBP16.06■□□□□ 0.16
HERPUD2-207ENST00000603731 G2E3Q7L622 706 aa16.06■□□□□ 0.16
HERPUD2-207ENST00000603731 PDGFDQ9GZP0 370 aaPredicted RBP16.06■□□□□ 0.16
HERPUD2-207ENST00000603731 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
HERPUD2-207ENST00000603731 KCPQ6ZWJ8 1503 aa16.05■□□□□ 0.16
HERPUD2-207ENST00000603731 BCL9O00512 1426 aa16.05■□□□□ 0.16
HERPUD2-207ENST00000603731 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
HERPUD2-207ENST00000603731 PTGER2P43116 358 aa16.05■□□□□ 0.16
HERPUD2-207ENST00000603731 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
HERPUD2-207ENST00000603731 ZBTB7AO95365 584 aa16.04■□□□□ 0.16
HERPUD2-207ENST00000603731 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
HERPUD2-207ENST00000603731 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
HERPUD2-207ENST00000603731 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
HERPUD2-207ENST00000603731 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
HERPUD2-207ENST00000603731 SYT17Q9BSW7 474 aa16.03■□□□□ 0.16
HERPUD2-207ENST00000603731 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
HERPUD2-207ENST00000603731 FHDC1Q9C0D6 1143 aaPredicted RBP16.03■□□□□ 0.16
HERPUD2-207ENST00000603731 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
HERPUD2-207ENST00000603731 ATG3Q9NT62 314 aa16.03■□□□□ 0.16
HERPUD2-207ENST00000603731 ASAP1Q9ULH1 1129 aa16.03■□□□□ 0.16
HERPUD2-207ENST00000603731 SLC4A10Q6U841 1118 aa16.02■□□□□ 0.16
HERPUD2-207ENST00000603731 TEX13AQ9BXU3 409 aaPredicted RBP16.02■□□□□ 0.16
HERPUD2-207ENST00000603731 PHAXQ9H814 394 aaKnown RBP16.02■□□□□ 0.16
HERPUD2-207ENST00000603731 USP16Q9Y5T5 823 aa16.02■□□□□ 0.16
HERPUD2-207ENST00000603731 ANXA1P04083 346 aa16.01■□□□□ 0.15
HERPUD2-207ENST00000603731 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
HERPUD2-207ENST00000603731 INTS3Q68E01 1043 aaKnown RBP16.01■□□□□ 0.15
HERPUD2-207ENST00000603731 VSIG10Q8N0Z9 540 aa16.01■□□□□ 0.15
HERPUD2-207ENST00000603731 RGPD3A6NKT7 1758 aaPredicted RBP16■□□□□ 0.15
HERPUD2-207ENST00000603731 RGPD4Q7Z3J3 1758 aa16■□□□□ 0.15
HERPUD2-207ENST00000603731 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
HERPUD2-207ENST00000603731 ERBB4Q15303 1308 aa16■□□□□ 0.15
HERPUD2-207ENST00000603731 F6X3S4 739 aa16■□□□□ 0.15
HERPUD2-207ENST00000603731 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
HERPUD2-207ENST00000603731 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
HERPUD2-207ENST00000603731 MYL6BP14649 208 aa15.99■□□□□ 0.15
HERPUD2-207ENST00000603731 SMARCC1Q92922 1105 aaPredicted RBP15.99■□□□□ 0.15
HERPUD2-207ENST00000603731 PXDNLA1KZ92 1463 aa15.98■□□□□ 0.15
HERPUD2-207ENST00000603731 PROSER3Q2NL68 480 aa15.98■□□□□ 0.15
HERPUD2-207ENST00000603731 SBF2Q86WG5 1849 aa15.97■□□□□ 0.15
HERPUD2-207ENST00000603731 ZBTB7BO15156 539 aaPredicted RBP15.97■□□□□ 0.15
HERPUD2-207ENST00000603731 STARD3NLO95772 234 aa15.97■□□□□ 0.15
HERPUD2-207ENST00000603731 AIMP1Q12904 312 aaKnown RBP15.97■□□□□ 0.15
HERPUD2-207ENST00000603731 PDIA6Q15084 440 aa15.97■□□□□ 0.15
HERPUD2-207ENST00000603731 DNAAF4Q8WXU2 420 aa15.97■□□□□ 0.15
HERPUD2-207ENST00000603731 ZBTB40Q9NUA8 1239 aa15.97■□□□□ 0.15
HERPUD2-207ENST00000603731 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
HERPUD2-207ENST00000603731 PI4KAP2A4QPH2 592 aa15.96■□□□□ 0.15
HERPUD2-207ENST00000603731 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
HERPUD2-207ENST00000603731 CENPQQ7L2Z9 268 aaPredicted RBP15.96■□□□□ 0.15
HERPUD2-207ENST00000603731 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
HERPUD2-207ENST00000603731 PI4KAP1Q8N8J0 262 aa15.96■□□□□ 0.15
HERPUD2-207ENST00000603731 TJP1Q07157 1748 aa15.95■□□□□ 0.14
HERPUD2-207ENST00000603731 COPS6Q7L5N1 327 aa15.95■□□□□ 0.14
HERPUD2-207ENST00000603731 RIC3Q7Z5B4 369 aa15.95■□□□□ 0.14
HERPUD2-207ENST00000603731 XAGE3Q8WTP9 111 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms