RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
HCG18-248ENST00000602861 TRPM3Q9HCF6 1732 aaPredicted RBP10.3□□□□□ -0.76
HCG18-248ENST00000602861 FAM98CQ17RN3 349 aaKnown RBP10.29□□□□□ -0.76
HCG18-248ENST00000602861 NGDNQ8NEJ9 315 aaKnown RBP10.29□□□□□ -0.76
HCG18-248ENST00000602861 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
HCG18-248ENST00000602861 BTG4Q9NY30 223 aa10.29□□□□□ -0.76
HCG18-248ENST00000602861 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
HCG18-248ENST00000602861 COL14A1Q05707 1796 aaKnown RBP10.29□□□□□ -0.76
HCG18-248ENST00000602861 ALS2Q96Q42 1657 aa10.28□□□□□ -0.76
HCG18-248ENST00000602861 QRICH2Q9H0J4 1663 aa10.28□□□□□ -0.76
HCG18-248ENST00000602861 WASLO00401 505 aaPredicted RBP10.28□□□□□ -0.76
HCG18-248ENST00000602861 ONECUT3O60422 494 aaPredicted RBP10.28□□□□□ -0.76
HCG18-248ENST00000602861 C8orf34Q49A92 452 aa10.28□□□□□ -0.76
HCG18-248ENST00000602861 PPP4R3BQ5MIZ7 849 aa10.28□□□□□ -0.76
HCG18-248ENST00000602861 SBNO2Q9Y2G9 1366 aa10.27□□□□□ -0.76
HCG18-248ENST00000602861 POTEB2H3BUK9 544 aa10.27□□□□□ -0.77
HCG18-248ENST00000602861 BAG6P46379 1132 aa10.27□□□□□ -0.77
HCG18-248ENST00000602861 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.27□□□□□ -0.77
HCG18-248ENST00000602861 PRDM11Q9NQV5 511 aa10.27□□□□□ -0.77
HCG18-248ENST00000602861 ATP7BP35670 1465 aa10.27□□□□□ -0.77
HCG18-248ENST00000602861 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
HCG18-248ENST00000602861 NEFMP07197 916 aa10.26□□□□□ -0.77
HCG18-248ENST00000602861 POLR3EQ9NVU0 708 aa10.26□□□□□ -0.77
HCG18-248ENST00000602861 SPATA31A5Q5VU36 1347 aa10.26□□□□□ -0.77
HCG18-248ENST00000602861 SPATA31A7Q8IWB4 1347 aa10.26□□□□□ -0.77
HCG18-248ENST00000602861 POLR3AO14802 1390 aaPredicted RBP10.26□□□□□ -0.77
HCG18-248ENST00000602861 MAMSTRQ6ZN01 415 aa10.25□□□□□ -0.77
HCG18-248ENST00000602861 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
HCG18-248ENST00000602861 NGEFQ8N5V2 710 aa10.25□□□□□ -0.77
HCG18-248ENST00000602861 CARD14Q9BXL6 1004 aa10.25□□□□□ -0.77
HCG18-248ENST00000602861 KIAA0232Q92628 1395 aa10.25□□□□□ -0.77
HCG18-248ENST00000602861 ARHGEF28Q8N1W1 1705 aaKnown RBP10.24□□□□□ -0.77
HCG18-248ENST00000602861 CRYBG1Q9Y4K1 1723 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
HCG18-248ENST00000602861 POTEMA6NI47 508 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 APAF1O14727 1248 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 COL9A1P20849 921 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 FAM182BQ5T319 152 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
HCG18-248ENST00000602861 NUDT16Q96DE0 195 aaKnown RBP10.24□□□□□ -0.77
HCG18-248ENST00000602861 BCL2L12Q9HB09 334 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 LRP5O75197 1615 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 THSD7AQ9UPZ6 1657 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 NINLQ9Y2I6 1382 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 ITSN1Q15811 1721 aa10.24□□□□□ -0.77
HCG18-248ENST00000602861 E9PSI1 815 aa10.23□□□□□ -0.77
HCG18-248ENST00000602861 PTPREP23469 700 aa10.23□□□□□ -0.77
HCG18-248ENST00000602861 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
HCG18-248ENST00000602861 MYSM1Q5VVJ2 828 aa10.23□□□□□ -0.77
HCG18-248ENST00000602861 PHRF1Q9P1Y6 1649 aaKnown RBP10.22□□□□□ -0.77
HCG18-248ENST00000602861 RGPD1P0DJD0 1748 aa10.22□□□□□ -0.77
HCG18-248ENST00000602861 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
HCG18-248ENST00000602861 CHRNA2Q15822 529 aa10.22□□□□□ -0.77
HCG18-248ENST00000602861 NUTM2GQ5VZR2 741 aa10.22□□□□□ -0.77
HCG18-248ENST00000602861 STRN4Q9NRL3 753 aa10.22□□□□□ -0.77
HCG18-248ENST00000602861 FAM198AQ9UFP1 575 aa10.22□□□□□ -0.77
HCG18-248ENST00000602861 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
HCG18-248ENST00000602861 BCAR3O75815 825 aa10.21□□□□□ -0.77
HCG18-248ENST00000602861 CLK2P49760 499 aaKnown RBP10.21□□□□□ -0.77
HCG18-248ENST00000602861 ZC3H6P61129 1189 aaKnown RBP10.21□□□□□ -0.77
HCG18-248ENST00000602861 NFKBIBQ15653 356 aa10.21□□□□□ -0.77
HCG18-248ENST00000602861 CDK19Q9BWU1 502 aa10.21□□□□□ -0.77
HCG18-248ENST00000602861 TBC1D2Q9BYX2 928 aa10.21□□□□□ -0.77
HCG18-248ENST00000602861 SPATA31A1Q5TZJ5 1347 aa10.21□□□□□ -0.78
HCG18-248ENST00000602861 DISP2A7MBM2 1401 aa10.21□□□□□ -0.78
HCG18-248ENST00000602861 TOPAZ1Q8N9V7 1692 aa10.21□□□□□ -0.78
HCG18-248ENST00000602861 USP19O94966 1318 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 ACEP12821 1306 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 CGNL1Q0VF96 1302 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 PDE3AQ14432 1141 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 NUDT18Q6ZVK8 323 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 SSH2Q76I76 1423 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 NRKQ7Z2Y5 1582 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 EYA1Q99502 592 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 TSKSQ9UJT2 592 aa10.2□□□□□ -0.78
HCG18-248ENST00000602861 TNS1Q9HBL0 1735 aaKnown RBP10.19□□□□□ -0.78
HCG18-248ENST00000602861 NSD3Q9BZ95 1437 aa10.19□□□□□ -0.78
HCG18-248ENST00000602861 SNPHO15079 494 aa10.19□□□□□ -0.78
HCG18-248ENST00000602861 IGHDP01880 384 aa10.19□□□□□ -0.78
HCG18-248ENST00000602861 SLC4A3P48751 1232 aa10.19□□□□□ -0.78
HCG18-248ENST00000602861 MCM6Q14566 821 aa10.19□□□□□ -0.78
HCG18-248ENST00000602861 R3HDM1Q15032 1099 aaKnown RBP10.19□□□□□ -0.78
HCG18-248ENST00000602861 POTEGQ6S5H5 508 aa10.19□□□□□ -0.78
HCG18-248ENST00000602861 CLUAP1Q96AJ1 413 aa10.19□□□□□ -0.78
HCG18-248ENST00000602861 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.19□□□□□ -0.78
HCG18-248ENST00000602861 ANKRD26Q9UPS8 1709 aa10.19□□□□□ -0.78
HCG18-248ENST00000602861 A6NJR5 290 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 NBPF26B4DH59 902 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 TRIM37O94972 964 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 RGS3P49796 1198 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 EVA1CP58658 441 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 FAM196AQ6ZSG2 479 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 OTUD5Q96G74 571 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 ARID3AQ99856 593 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 PNMA3Q9UL41 463 aa10.18□□□□□ -0.78
HCG18-248ENST00000602861 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
HCG18-248ENST00000602861 CENPJQ9HC77 1338 aaPredicted RBP10.17□□□□□ -0.78
HCG18-248ENST00000602861 APBB1O00213 710 aa10.17□□□□□ -0.78
HCG18-248ENST00000602861 DNAJB2P25686 324 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms