RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 BRD1O95696 1058 aa9.24□□□□□ -0.93
KDM1A-206ENST00000602503 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
KDM1A-206ENST00000602503 TMEM87AQ8NBN3 555 aa9.24□□□□□ -0.93
KDM1A-206ENST00000602503 IFT57Q9NWB7 429 aa9.24□□□□□ -0.93
KDM1A-206ENST00000602503 LRRFIP2Q9Y608 721 aaKnown RBP9.24□□□□□ -0.93
KDM1A-206ENST00000602503 CLTCQ00610 1675 aaKnown RBP9.23□□□□□ -0.93
KDM1A-206ENST00000602503 SLU7O95391 586 aaKnown RBP9.23□□□□□ -0.93
KDM1A-206ENST00000602503 ZNF853P0CG23 659 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 TICAM2Q86XR7 235 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 ZDHHC9Q9Y397 364 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 SIGLEC1Q9BZZ2 1709 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 ADGRF5Q8IZF2 1346 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 TPM1P09493 284 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 FBXO38Q6PIJ6 1188 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 GPATCH11Q8N954 259 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 INTS4Q96HW7 963 aaKnown RBP9.23□□□□□ -0.93
KDM1A-206ENST00000602503 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 ZNF446Q9NWS9 450 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 RRP15Q9Y3B9 282 aaKnown RBP9.23□□□□□ -0.93
KDM1A-206ENST00000602503 ADGRB2O60241 1585 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 MED14O60244 1454 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 NEXMIFQ5QGS0 1516 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 H2AFXP16104 143 aaPredicted RBP9.23□□□□□ -0.93
KDM1A-206ENST00000602503 TPD52L1Q16890 204 aaPredicted RBP9.23□□□□□ -0.93
KDM1A-206ENST00000602503 CFAP70Q5T0N1 1121 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 CASC1Q6TDU7 716 aa9.23□□□□□ -0.93
KDM1A-206ENST00000602503 PLEKHG2Q9H7P9 1386 aa9.22□□□□□ -0.93
KDM1A-206ENST00000602503 MAP2K1Q02750 393 aaPredicted RBP9.22□□□□□ -0.93
KDM1A-206ENST00000602503 SAFB2Q14151 953 aaKnown RBP eCLIP9.22□□□□□ -0.93
KDM1A-206ENST00000602503 MCTP2Q6DN12 878 aa9.22□□□□□ -0.93
KDM1A-206ENST00000602503 CCDC146Q8IYE0 955 aa9.22□□□□□ -0.93
KDM1A-206ENST00000602503 EXOC4Q96A65 974 aa9.22□□□□□ -0.93
KDM1A-206ENST00000602503 RBM42Q9BTD8 480 aaKnown RBP9.22□□□□□ -0.93
KDM1A-206ENST00000602503 NSFL1CQ9UNZ2 370 aaKnown RBP9.22□□□□□ -0.93
KDM1A-206ENST00000602503 PTPRCP08575 1304 aa9.22□□□□□ -0.93
KDM1A-206ENST00000602503 GOLIM4O00461 696 aa9.22□□□□□ -0.93
KDM1A-206ENST00000602503 USP8P40818 1118 aa9.22□□□□□ -0.93
KDM1A-206ENST00000602503 SSR1P43307 286 aaKnown RBP9.22□□□□□ -0.93
KDM1A-206ENST00000602503 FILIP1Q7Z7B0 1213 aa9.22□□□□□ -0.93
KDM1A-206ENST00000602503 C16orf45Q96MC5 204 aaPredicted RBP9.22□□□□□ -0.93
KDM1A-206ENST00000602503 PRR29P0C7W0 189 aa9.21□□□□□ -0.93
KDM1A-206ENST00000602503 SRPK2P78362 688 aaKnown RBP9.21□□□□□ -0.93
KDM1A-206ENST00000602503 TMEM132EQ6IEE7 984 aa9.21□□□□□ -0.93
KDM1A-206ENST00000602503 PLCD4Q9BRC7 762 aa9.21□□□□□ -0.93
KDM1A-206ENST00000602503 BSDC1Q9NW68 430 aaPredicted RBP9.21□□□□□ -0.93
KDM1A-206ENST00000602503 DIP2CQ9Y2E4 1556 aa9.21□□□□□ -0.93
KDM1A-206ENST00000602503 RICTORQ6R327 1708 aa9.21□□□□□ -0.94
KDM1A-206ENST00000602503 PPP1R12AO14974 1030 aaPredicted RBP9.21□□□□□ -0.94
KDM1A-206ENST00000602503 ANKRD20A12PQ8NF67 263 aa9.21□□□□□ -0.94
KDM1A-206ENST00000602503 RUNDC1Q96C34 613 aa9.21□□□□□ -0.94
KDM1A-206ENST00000602503 CARD14Q9BXL6 1004 aa9.21□□□□□ -0.94
KDM1A-206ENST00000602503 NSD3Q9BZ95 1437 aa9.21□□□□□ -0.94
KDM1A-206ENST00000602503 FAM107BQ9H098 131 aa9.21□□□□□ -0.94
KDM1A-206ENST00000602503 SUFUQ9UMX1 484 aa9.21□□□□□ -0.94
KDM1A-206ENST00000602503 FHOD1Q9Y613 1164 aa9.21□□□□□ -0.94
KDM1A-206ENST00000602503 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
KDM1A-206ENST00000602503 HCLS1P14317 486 aaPredicted RBP9.2□□□□□ -0.94
KDM1A-206ENST00000602503 MAP2K2P36507 400 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 PKP1Q13835 747 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 ZRSR1Q15695 479 aaKnown RBP9.2□□□□□ -0.94
KDM1A-206ENST00000602503 TMCO3Q6UWJ1 677 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 C14orf37Q86TY3 774 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 WDR33Q9C0J8 1336 aaKnown RBP9.2□□□□□ -0.94
KDM1A-206ENST00000602503 PNMA6AP0CW24 399 aaPredicted RBP9.2□□□□□ -0.94
KDM1A-206ENST00000602503 UBE2HP62256 183 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 PTPN14Q15678 1187 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 INTS3Q68E01 1043 aaKnown RBP9.2□□□□□ -0.94
KDM1A-206ENST00000602503 MMS22LQ6ZRQ5 1243 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 CFAP53Q96M91 514 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 KCND1Q9NSA2 647 aa9.2□□□□□ -0.94
KDM1A-206ENST00000602503 ZNF215Q9UL58 517 aaPredicted RBP9.2□□□□□ -0.94
KDM1A-206ENST00000602503 CCDC192P0DO97 292 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.19□□□□□ -0.94
KDM1A-206ENST00000602503 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.19□□□□□ -0.94
KDM1A-206ENST00000602503 ZBTB40Q9NUA8 1239 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
KDM1A-206ENST00000602503 EVC2Q86UK5 1308 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 CLSTN1O94985 981 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 CPP00450 1065 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 ACTN2P35609 894 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 MPNDQ8N594 471 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 LNPKQ9C0E8 428 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 TMX1Q9H3N1 280 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 ATP6V1DQ9Y5K8 247 aa9.19□□□□□ -0.94
KDM1A-206ENST00000602503 TRIM66O15016 1216 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 RPS6KA5O75582 802 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 PLCB2Q00722 1185 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 DHX8Q14562 1220 aaKnown RBP9.18□□□□□ -0.94
KDM1A-206ENST00000602503 LRCH2Q5VUJ6 765 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 NEK11Q8NG66 645 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 TOMM22Q9NS69 142 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 ZBTB12Q9Y330 459 aaPredicted RBP9.18□□□□□ -0.94
KDM1A-206ENST00000602503 TULP4Q9NRJ4 1543 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 AK9Q5TCS8 1911 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 IDI1Q13907 227 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 ELF2Q15723 593 aa9.18□□□□□ -0.94
KDM1A-206ENST00000602503 ATF7IPQ6VMQ6 1270 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms