RNA–Protein interactions for RNA: ENST00000602287.5

SFXN2-204, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-204ENST00000602287 PIM2Q9P1W9 311 aa20.48■□□□□ 0.87
SFXN2-204ENST00000602287 GNAT3A8MTJ3 354 aa20.47■□□□□ 0.87
SFXN2-204ENST00000602287 POLRMTO00411 1230 aaKnown RBP20.47■□□□□ 0.87
SFXN2-204ENST00000602287 KCNA3P22001 575 aa20.47■□□□□ 0.87
SFXN2-204ENST00000602287 TM4SF1P30408 202 aa20.47■□□□□ 0.87
SFXN2-204ENST00000602287 TEFQ10587 303 aa20.47■□□□□ 0.87
SFXN2-204ENST00000602287 NARFQ9UHQ1 456 aa20.47■□□□□ 0.87
SFXN2-204ENST00000602287 USPL1Q5W0Q7 1092 aa20.46■□□□□ 0.87
SFXN2-204ENST00000602287 ARHGAP27Q6ZUM4 889 aa20.46■□□□□ 0.87
SFXN2-204ENST00000602287 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
SFXN2-204ENST00000602287 ZBTB1Q9Y2K1 713 aa20.46■□□□□ 0.87
SFXN2-204ENST00000602287 DLEC1Q9Y238 1755 aa20.45■□□□□ 0.86
SFXN2-204ENST00000602287 STARD3NLO95772 234 aa20.45■□□□□ 0.86
SFXN2-204ENST00000602287 DALRD3Q5D0E6 543 aaKnown RBP20.44■□□□□ 0.86
SFXN2-204ENST00000602287 TEX13AQ9BXU3 409 aaPredicted RBP20.44■□□□□ 0.86
SFXN2-204ENST00000602287 SCN7AQ01118 1682 aa20.43■□□□□ 0.86
SFXN2-204ENST00000602287 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
SFXN2-204ENST00000602287 ZNF790Q6PG37 636 aa20.43■□□□□ 0.86
SFXN2-204ENST00000602287 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
SFXN2-204ENST00000602287 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
SFXN2-204ENST00000602287 HEG1Q9ULI3 1381 aa20.42■□□□□ 0.86
SFXN2-204ENST00000602287 SBF1O95248 1867 aa20.41■□□□□ 0.86
SFXN2-204ENST00000602287 A0A087WZG4 1122 aa20.41■□□□□ 0.86
SFXN2-204ENST00000602287 KIF3CO14782 793 aa20.41■□□□□ 0.86
SFXN2-204ENST00000602287 NFIXQ14938 502 aa20.41■□□□□ 0.86
SFXN2-204ENST00000602287 NUDCQ9Y266 331 aa20.41■□□□□ 0.86
SFXN2-204ENST00000602287 HSPA6P17066 643 aa20.4■□□□□ 0.86
SFXN2-204ENST00000602287 EIF5P55010 431 aaKnown RBP20.4■□□□□ 0.86
SFXN2-204ENST00000602287 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
SFXN2-204ENST00000602287 RSPH6AQ9H0K4 717 aa20.4■□□□□ 0.86
SFXN2-204ENST00000602287 CANXP27824 592 aaKnown RBP20.39■□□□□ 0.85
SFXN2-204ENST00000602287 CHRNA5P30532 468 aa20.39■□□□□ 0.85
SFXN2-204ENST00000602287 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
SFXN2-204ENST00000602287 BCL2L12Q9HB09 334 aa20.39■□□□□ 0.85
SFXN2-204ENST00000602287 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
SFXN2-204ENST00000602287 SERPINB2P05120 415 aa20.37■□□□□ 0.85
SFXN2-204ENST00000602287 C9orf131Q5VYM1 1079 aa20.37■□□□□ 0.85
SFXN2-204ENST00000602287 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
SFXN2-204ENST00000602287 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
SFXN2-204ENST00000602287 BCORQ6W2J9 1755 aa20.36■□□□□ 0.85
SFXN2-204ENST00000602287 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
SFXN2-204ENST00000602287 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
SFXN2-204ENST00000602287 TOMM70O94826 608 aa20.35■□□□□ 0.85
SFXN2-204ENST00000602287 PPP2R1AP30153 589 aa20.35■□□□□ 0.85
SFXN2-204ENST00000602287 NPM2Q86SE8 214 aaKnown RBP20.35■□□□□ 0.85
SFXN2-204ENST00000602287 PDZRN3Q9UPQ7 1066 aa20.34■□□□□ 0.85
SFXN2-204ENST00000602287 ANKRD31Q8N7Z5 1873 aa20.34■□□□□ 0.85
SFXN2-204ENST00000602287 KDM2BQ8NHM5 1336 aa20.33■□□□□ 0.85
SFXN2-204ENST00000602287 ZC3H4Q9UPT8 1303 aaKnown RBP20.33■□□□□ 0.85
SFXN2-204ENST00000602287 U2AF1L5P0DN76 240 aaPredicted RBP20.33■□□□□ 0.85
SFXN2-204ENST00000602287 U2AF1Q01081 240 aaKnown RBP eCLIP20.33■□□□□ 0.85
SFXN2-204ENST00000602287 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
SFXN2-204ENST00000602287 RNF181Q9P0P0 153 aa20.33■□□□□ 0.85
SFXN2-204ENST00000602287 CARMIL3Q8ND23 1372 aa20.33■□□□□ 0.84
SFXN2-204ENST00000602287 H0YIN7 160 aa20.32■□□□□ 0.84
SFXN2-204ENST00000602287 TTLL6Q8N841 843 aa20.32■□□□□ 0.84
SFXN2-204ENST00000602287 HTATSF1O43719 755 aaKnown RBP20.31■□□□□ 0.84
SFXN2-204ENST00000602287 NMRK2Q9NPI5 230 aa20.31■□□□□ 0.84
SFXN2-204ENST00000602287 CCDC88AQ3V6T2 1871 aa20.3■□□□□ 0.84
SFXN2-204ENST00000602287 TBC1D9BQ66K14 1250 aa20.3■□□□□ 0.84
SFXN2-204ENST00000602287 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
SFXN2-204ENST00000602287 C2CD5Q86YS7 1000 aa20.3■□□□□ 0.84
SFXN2-204ENST00000602287 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
SFXN2-204ENST00000602287 PDE6BP35913 854 aa20.29■□□□□ 0.84
SFXN2-204ENST00000602287 APLP1P51693 650 aa20.29■□□□□ 0.84
SFXN2-204ENST00000602287 C16orf71Q8IYS4 520 aaPredicted RBP20.29■□□□□ 0.84
SFXN2-204ENST00000602287 TBC1D2BQ9UPU7 963 aa20.29■□□□□ 0.84
SFXN2-204ENST00000602287 COL11A2P13942 1736 aaPredicted RBP20.29■□□□□ 0.84
SFXN2-204ENST00000602287 TIAM2Q8IVF5 1701 aa20.29■□□□□ 0.84
SFXN2-204ENST00000602287 DLG5Q8TDM6 1919 aa20.28■□□□□ 0.84
SFXN2-204ENST00000602287 A1BGP04217 495 aa20.28■□□□□ 0.84
SFXN2-204ENST00000602287 RBM46Q8TBY0 533 aaKnown RBP20.28■□□□□ 0.84
SFXN2-204ENST00000602287 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
SFXN2-204ENST00000602287 LAMB4A4D0S4 1761 aa20.27■□□□□ 0.84
SFXN2-204ENST00000602287 ARFGEF2Q9Y6D5 1785 aa20.27■□□□□ 0.84
SFXN2-204ENST00000602287 SNRPA1P09661 255 aaKnown RBP20.27■□□□□ 0.84
SFXN2-204ENST00000602287 LMNB1P20700 586 aa20.27■□□□□ 0.84
SFXN2-204ENST00000602287 SETDB2Q96T68 719 aa20.27■□□□□ 0.84
SFXN2-204ENST00000602287 DICER1Q9UPY3 1922 aaKnown RBP20.26■□□□□ 0.83
SFXN2-204ENST00000602287 KCNQ3O43525 872 aa20.26■□□□□ 0.83
SFXN2-204ENST00000602287 CAMTA2O94983 1202 aa20.26■□□□□ 0.83
SFXN2-204ENST00000602287 NEFMP07197 916 aa20.26■□□□□ 0.83
SFXN2-204ENST00000602287 PRR5LQ6MZQ0 368 aa20.26■□□□□ 0.83
SFXN2-204ENST00000602287 MCM10Q7L590 875 aa20.26■□□□□ 0.83
SFXN2-204ENST00000602287 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
SFXN2-204ENST00000602287 FER1L6Q2WGJ9 1857 aa20.26■□□□□ 0.83
SFXN2-204ENST00000602287 WDR90Q96KV7 1748 aa20.25■□□□□ 0.83
SFXN2-204ENST00000602287 RASSF7Q02833 373 aa20.25■□□□□ 0.83
SFXN2-204ENST00000602287 CLEC4GQ6UXB4 293 aa20.25■□□□□ 0.83
SFXN2-204ENST00000602287 USP16Q9Y5T5 823 aa20.25■□□□□ 0.83
SFXN2-204ENST00000602287 CACNA1SQ13698 1873 aa20.24■□□□□ 0.83
SFXN2-204ENST00000602287 RGL2O15211 777 aa20.24■□□□□ 0.83
SFXN2-204ENST00000602287 FSTL1Q12841 308 aa20.24■□□□□ 0.83
SFXN2-204ENST00000602287 CNBD1Q8NA66 436 aa20.24■□□□□ 0.83
SFXN2-204ENST00000602287 ZNF652Q9Y2D9 606 aa20.24■□□□□ 0.83
SFXN2-204ENST00000602287 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
SFXN2-204ENST00000602287 NPHP1O15259 732 aa20.23■□□□□ 0.83
SFXN2-204ENST00000602287 ST5P78524 1137 aa20.23■□□□□ 0.83
SFXN2-204ENST00000602287 TAF7Q15545 349 aaPredicted RBP20.22■□□□□ 0.83
SFXN2-204ENST00000602287 ZNF622Q969S3 477 aaKnown RBP eCLIP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms