RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
ZNF544-219ENST00000602260 ZNF790Q6PG37 636 aa15.35■□□□□ 0.05
ZNF544-219ENST00000602260 BCS1LQ9Y276 419 aa15.35■□□□□ 0.05
ZNF544-219ENST00000602260 HTATSF1O43719 755 aaKnown RBP15.34■□□□□ 0.05
ZNF544-219ENST00000602260 ZNF526Q8TF50 670 aaPredicted RBP15.34■□□□□ 0.05
ZNF544-219ENST00000602260 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
ZNF544-219ENST00000602260 KCPQ6ZWJ8 1503 aa15.33■□□□□ 0.05
ZNF544-219ENST00000602260 A0A0G2JLW4 131 aa15.33■□□□□ 0.04
ZNF544-219ENST00000602260 DPEP1P16444 411 aa15.33■□□□□ 0.04
ZNF544-219ENST00000602260 MCM10Q7L590 875 aa15.33■□□□□ 0.04
ZNF544-219ENST00000602260 ZNF496Q96IT1 587 aaPredicted RBP15.33■□□□□ 0.04
ZNF544-219ENST00000602260 BTBD11A6QL63 1104 aa15.32■□□□□ 0.04
ZNF544-219ENST00000602260 STARD3NLO95772 234 aa15.32■□□□□ 0.04
ZNF544-219ENST00000602260 NEFMP07197 916 aa15.32■□□□□ 0.04
ZNF544-219ENST00000602260 HSPA6P17066 643 aa15.32■□□□□ 0.04
ZNF544-219ENST00000602260 PLEKHF1Q96S99 279 aa15.32■□□□□ 0.04
ZNF544-219ENST00000602260 KCNQ3O43525 872 aa15.31■□□□□ 0.04
ZNF544-219ENST00000602260 ZPR1O75312 459 aa15.31■□□□□ 0.04
ZNF544-219ENST00000602260 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
ZNF544-219ENST00000602260 PNNQ9H307 717 aaKnown RBP15.31■□□□□ 0.04
ZNF544-219ENST00000602260 PIM2Q9P1W9 311 aa15.31■□□□□ 0.04
ZNF544-219ENST00000602260 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
ZNF544-219ENST00000602260 SOS1Q07889 1333 aaPredicted RBP15.31■□□□□ 0.04
ZNF544-219ENST00000602260 COL15A1P39059 1388 aa15.31■□□□□ 0.04
ZNF544-219ENST00000602260 NRXN2Q9P2S2 1712 aa15.31■□□□□ 0.04
ZNF544-219ENST00000602260 FKBP8Q14318 412 aa15.3■□□□□ 0.04
ZNF544-219ENST00000602260 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
ZNF544-219ENST00000602260 FMNL2Q96PY5 1086 aa15.3■□□□□ 0.04
ZNF544-219ENST00000602260 MYBBP1AQ9BQG0 1328 aaKnown RBP15.3■□□□□ 0.04
ZNF544-219ENST00000602260 TEX13AQ9BXU3 409 aaPredicted RBP15.3■□□□□ 0.04
ZNF544-219ENST00000602260 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
ZNF544-219ENST00000602260 DLEC1Q9Y238 1755 aa15.3■□□□□ 0.04
ZNF544-219ENST00000602260 ZBTB1Q9Y2K1 713 aa15.3■□□□□ 0.04
ZNF544-219ENST00000602260 KIF3CO14782 793 aa15.29■□□□□ 0.04
ZNF544-219ENST00000602260 DDR1Q08345 913 aa15.29■□□□□ 0.04
ZNF544-219ENST00000602260 DALRD3Q5D0E6 543 aaKnown RBP15.29■□□□□ 0.04
ZNF544-219ENST00000602260 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
ZNF544-219ENST00000602260 SIPA1L3O60292 1781 aaPredicted RBP15.29■□□□□ 0.04
ZNF544-219ENST00000602260 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
ZNF544-219ENST00000602260 KCNA3P22001 575 aa15.28■□□□□ 0.04
ZNF544-219ENST00000602260 CANXP27824 592 aaKnown RBP15.28■□□□□ 0.04
ZNF544-219ENST00000602260 NFE2L2Q16236 605 aa15.28■□□□□ 0.04
ZNF544-219ENST00000602260 TNRC6CQ9HCJ0 1690 aaKnown RBP15.28■□□□□ 0.04
ZNF544-219ENST00000602260 TOMM70O94826 608 aa15.27■□□□□ 0.04
ZNF544-219ENST00000602260 TM4SF1P30408 202 aa15.27■□□□□ 0.04
ZNF544-219ENST00000602260 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.04
ZNF544-219ENST00000602260 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
ZNF544-219ENST00000602260 NARFQ9UHQ1 456 aa15.27■□□□□ 0.04
ZNF544-219ENST00000602260 SCN7AQ01118 1682 aa15.27■□□□□ 0.03
ZNF544-219ENST00000602260 MAPK8IP3Q9UPT6 1336 aa15.26■□□□□ 0.03
ZNF544-219ENST00000602260 EIF5P55010 431 aaKnown RBP15.26■□□□□ 0.03
ZNF544-219ENST00000602260 PRKRIP1Q9H875 184 aaPredicted RBP15.26■□□□□ 0.03
ZNF544-219ENST00000602260 ZC3H4Q9UPT8 1303 aaKnown RBP15.25■□□□□ 0.03
ZNF544-219ENST00000602260 A0A087WZG4 1122 aa15.25■□□□□ 0.03
ZNF544-219ENST00000602260 A1BGP04217 495 aa15.25■□□□□ 0.03
ZNF544-219ENST00000602260 SBF1O95248 1867 aa15.25■□□□□ 0.03
ZNF544-219ENST00000602260 KDM2BQ8NHM5 1336 aa15.24■□□□□ 0.03
ZNF544-219ENST00000602260 SNRPA1P09661 255 aaKnown RBP15.24■□□□□ 0.03
ZNF544-219ENST00000602260 APLP1P51693 650 aa15.24■□□□□ 0.03
ZNF544-219ENST00000602260 C9orf131Q5VYM1 1079 aa15.24■□□□□ 0.03
ZNF544-219ENST00000602260 MIS18AQ9NYP9 233 aa15.24■□□□□ 0.03
ZNF544-219ENST00000602260 USP16Q9Y5T5 823 aa15.24■□□□□ 0.03
ZNF544-219ENST00000602260 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
ZNF544-219ENST00000602260 IL6STP40189 918 aaPredicted RBP15.23■□□□□ 0.03
ZNF544-219ENST00000602260 NFIXQ14938 502 aa15.23■□□□□ 0.03
ZNF544-219ENST00000602260 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
ZNF544-219ENST00000602260 THUMPD2Q9BTF0 503 aaKnown RBP15.23■□□□□ 0.03
ZNF544-219ENST00000602260 BCL2L12Q9HB09 334 aa15.23■□□□□ 0.03
ZNF544-219ENST00000602260 CHRNA5P30532 468 aa15.22■□□□□ 0.03
ZNF544-219ENST00000602260 RIPK4P57078 832 aa15.22■□□□□ 0.03
ZNF544-219ENST00000602260 WDR90Q96KV7 1748 aa15.21■□□□□ 0.03
ZNF544-219ENST00000602260 WDR43Q15061 677 aaKnown RBP eCLIP15.21■□□□□ 0.03
ZNF544-219ENST00000602260 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
ZNF544-219ENST00000602260 RBM46Q8TBY0 533 aaKnown RBP15.21■□□□□ 0.03
ZNF544-219ENST00000602260 NMRK2Q9NPI5 230 aa15.21■□□□□ 0.03
ZNF544-219ENST00000602260 RNF181Q9P0P0 153 aa15.21■□□□□ 0.03
ZNF544-219ENST00000602260 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
ZNF544-219ENST00000602260 TBC1D2BQ9UPU7 963 aa15.21■□□□□ 0.03
ZNF544-219ENST00000602260 ZNF330Q9Y3S2 320 aaPredicted RBP15.21■□□□□ 0.03
ZNF544-219ENST00000602260 TIAM2Q8IVF5 1701 aa15.2■□□□□ 0.02
ZNF544-219ENST00000602260 SERPINB2P05120 415 aa15.2■□□□□ 0.02
ZNF544-219ENST00000602260 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
ZNF544-219ENST00000602260 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
ZNF544-219ENST00000602260 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
ZNF544-219ENST00000602260 ADAMTS8Q9UP79 889 aa15.2■□□□□ 0.02
ZNF544-219ENST00000602260 BCORQ6W2J9 1755 aa15.2■□□□□ 0.02
ZNF544-219ENST00000602260 PIP4K2AP48426 406 aaPredicted RBP15.19■□□□□ 0.02
ZNF544-219ENST00000602260 CARMIL3Q8ND23 1372 aa15.19■□□□□ 0.02
ZNF544-219ENST00000602260 ZNF316A6NFI3 1004 aaPredicted RBP15.18■□□□□ 0.02
ZNF544-219ENST00000602260 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
ZNF544-219ENST00000602260 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
ZNF544-219ENST00000602260 FSTL1Q12841 308 aa15.18■□□□□ 0.02
ZNF544-219ENST00000602260 IFFO2Q5TF58 517 aa15.18■□□□□ 0.02
ZNF544-219ENST00000602260 TTLL6Q8N841 843 aa15.18■□□□□ 0.02
ZNF544-219ENST00000602260 RUNDC1Q96C34 613 aa15.18■□□□□ 0.02
ZNF544-219ENST00000602260 RRP7AQ9Y3A4 280 aaKnown RBP15.18■□□□□ 0.02
ZNF544-219ENST00000602260 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
ZNF544-219ENST00000602260 NBPF26B4DH59 902 aa15.17■□□□□ 0.02
ZNF544-219ENST00000602260 H0YIN7 160 aa15.17■□□□□ 0.02
ZNF544-219ENST00000602260 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms