RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 TJP1Q07157 1748 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 TIAM2Q8IVF5 1701 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 MRC1P22897 1456 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 PRKAR2BP31323 418 aa12.13□□□□□ -0.47
FARP1-234ENST00000601361 PRELPP51888 382 aa12.13□□□□□ -0.47
FARP1-234ENST00000601361 HTRA3P83110 453 aa12.13□□□□□ -0.47
FARP1-234ENST00000601361 RBM46Q8TBY0 533 aaKnown RBP12.13□□□□□ -0.47
FARP1-234ENST00000601361 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
FARP1-234ENST00000601361 NEFMP07197 916 aa12.12□□□□□ -0.47
FARP1-234ENST00000601361 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
FARP1-234ENST00000601361 CCDC87Q9NVE4 849 aa12.12□□□□□ -0.47
FARP1-234ENST00000601361 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
FARP1-234ENST00000601361 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
FARP1-234ENST00000601361 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
FARP1-234ENST00000601361 DICER1Q9UPY3 1922 aaKnown RBP12.11□□□□□ -0.47
FARP1-234ENST00000601361 ADAMTS7Q9UKP4 1686 aa12.11□□□□□ -0.47
FARP1-234ENST00000601361 ZPR1O75312 459 aa12.11□□□□□ -0.47
FARP1-234ENST00000601361 RTF1Q92541 710 aaKnown RBP12.11□□□□□ -0.47
FARP1-234ENST00000601361 CAPN15O75808 1086 aa12.1□□□□□ -0.47
FARP1-234ENST00000601361 GYS1P13807 737 aa12.1□□□□□ -0.47
FARP1-234ENST00000601361 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
FARP1-234ENST00000601361 SRP68Q9UHB9 627 aaKnown RBP12.1□□□□□ -0.47
FARP1-234ENST00000601361 STARD3NLO95772 234 aa12.09□□□□□ -0.47
FARP1-234ENST00000601361 FSTL1Q12841 308 aa12.09□□□□□ -0.47
FARP1-234ENST00000601361 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
FARP1-234ENST00000601361 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
FARP1-234ENST00000601361 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
FARP1-234ENST00000601361 PHACTR3Q96KR7 559 aa12.09□□□□□ -0.47
FARP1-234ENST00000601361 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
FARP1-234ENST00000601361 FCHSD2O94868 740 aa12.08□□□□□ -0.48
FARP1-234ENST00000601361 CYP19A1P11511 503 aaPredicted RBP12.08□□□□□ -0.48
FARP1-234ENST00000601361 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
FARP1-234ENST00000601361 TGFB2P61812 414 aa12.08□□□□□ -0.48
FARP1-234ENST00000601361 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
FARP1-234ENST00000601361 IL17REQ8NFR9 667 aa12.08□□□□□ -0.48
FARP1-234ENST00000601361 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
FARP1-234ENST00000601361 BTBD11A6QL63 1104 aa12.07□□□□□ -0.48
FARP1-234ENST00000601361 FKBP8Q14318 412 aa12.07□□□□□ -0.48
FARP1-234ENST00000601361 USPL1Q5W0Q7 1092 aa12.07□□□□□ -0.48
FARP1-234ENST00000601361 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
FARP1-234ENST00000601361 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
FARP1-234ENST00000601361 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
FARP1-234ENST00000601361 BCS1LQ9Y276 419 aa12.07□□□□□ -0.48
FARP1-234ENST00000601361 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
FARP1-234ENST00000601361 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
FARP1-234ENST00000601361 COL15A1P39059 1388 aa12.06□□□□□ -0.48
FARP1-234ENST00000601361 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
FARP1-234ENST00000601361 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
FARP1-234ENST00000601361 A0A0G2JLW4 131 aa12.06□□□□□ -0.48
FARP1-234ENST00000601361 ZBTB1Q9Y2K1 713 aa12.06□□□□□ -0.48
FARP1-234ENST00000601361 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
FARP1-234ENST00000601361 A0A087WZG4 1122 aa12.05□□□□□ -0.48
FARP1-234ENST00000601361 KCNA3P22001 575 aa12.05□□□□□ -0.48
FARP1-234ENST00000601361 C9orf131Q5VYM1 1079 aa12.05□□□□□ -0.48
FARP1-234ENST00000601361 ARHGAP27Q6ZUM4 889 aa12.05□□□□□ -0.48
FARP1-234ENST00000601361 MCM10Q7L590 875 aa12.05□□□□□ -0.48
FARP1-234ENST00000601361 ZNF496Q96IT1 587 aaPredicted RBP12.05□□□□□ -0.48
FARP1-234ENST00000601361 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
FARP1-234ENST00000601361 DPEP1P16444 411 aa12.04□□□□□ -0.48
FARP1-234ENST00000601361 DDX10Q13206 875 aaKnown RBP12.04□□□□□ -0.48
FARP1-234ENST00000601361 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
FARP1-234ENST00000601361 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
FARP1-234ENST00000601361 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
FARP1-234ENST00000601361 CEMIPQ8WUJ3 1361 aa12.04□□□□□ -0.48
FARP1-234ENST00000601361 DDR1Q08345 913 aa12.03□□□□□ -0.48
FARP1-234ENST00000601361 DCTN1Q14203 1278 aa12.03□□□□□ -0.48
FARP1-234ENST00000601361 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
FARP1-234ENST00000601361 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
FARP1-234ENST00000601361 RALBP1Q15311 655 aa12.02□□□□□ -0.49
FARP1-234ENST00000601361 BICDL1Q6ZP65 573 aa12.02□□□□□ -0.49
FARP1-234ENST00000601361 C16orf71Q8IYS4 520 aaPredicted RBP12.02□□□□□ -0.49
FARP1-234ENST00000601361 CACNA1SQ13698 1873 aa12.02□□□□□ -0.49
FARP1-234ENST00000601361 ANKRD31Q8N7Z5 1873 aa12.02□□□□□ -0.49
FARP1-234ENST00000601361 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
FARP1-234ENST00000601361 NPHP1O15259 732 aa12.01□□□□□ -0.49
FARP1-234ENST00000601361 KCNQ3O43525 872 aa12.01□□□□□ -0.49
FARP1-234ENST00000601361 SLC34A2O95436 690 aa12.01□□□□□ -0.49
FARP1-234ENST00000601361 HSPA1AP0DMV8 641 aaKnown RBP12.01□□□□□ -0.49
FARP1-234ENST00000601361 HSPA1BP0DMV9 641 aaKnown RBP12.01□□□□□ -0.49
FARP1-234ENST00000601361 TM4SF1P30408 202 aa12.01□□□□□ -0.49
FARP1-234ENST00000601361 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
FARP1-234ENST00000601361 SERPINB2P05120 415 aa12□□□□□ -0.49
FARP1-234ENST00000601361 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
FARP1-234ENST00000601361 IL6STP40189 918 aaPredicted RBP12□□□□□ -0.49
FARP1-234ENST00000601361 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
FARP1-234ENST00000601361 NFIXQ14938 502 aa12□□□□□ -0.49
FARP1-234ENST00000601361 TAF7Q15545 349 aaPredicted RBP12□□□□□ -0.49
FARP1-234ENST00000601361 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
FARP1-234ENST00000601361 DALRD3Q5D0E6 543 aaKnown RBP12□□□□□ -0.49
FARP1-234ENST00000601361 SMC1BQ8NDV3 1235 aa12□□□□□ -0.49
FARP1-234ENST00000601361 RRAGCQ9HB90 399 aa12□□□□□ -0.49
FARP1-234ENST00000601361 TBC1D2BQ9UPU7 963 aa12□□□□□ -0.49
FARP1-234ENST00000601361 A1BGP04217 495 aa11.99□□□□□ -0.49
FARP1-234ENST00000601361 SNRPA1P09661 255 aaKnown RBP11.99□□□□□ -0.49
FARP1-234ENST00000601361 CHRNA5P30532 468 aa11.99□□□□□ -0.49
FARP1-234ENST00000601361 NFE2L2Q16236 605 aa11.99□□□□□ -0.49
FARP1-234ENST00000601361 RNF181Q9P0P0 153 aa11.99□□□□□ -0.49
FARP1-234ENST00000601361 DLG5Q8TDM6 1919 aa11.99□□□□□ -0.49
FARP1-234ENST00000601361 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
FARP1-234ENST00000601361 COL11A2P13942 1736 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms