RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
USE1-208ENST00000600970 EIF4G2P78344 907 aaKnown RBP eCLIP22.92■■□□□ 1.26
USE1-208ENST00000600970 SLC52A2Q9HAB3 445 aa22.92■■□□□ 1.26
USE1-208ENST00000600970 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
USE1-208ENST00000600970 RASSF7Q02833 373 aa22.91■■□□□ 1.26
USE1-208ENST00000600970 LGR6Q9HBX8 967 aa22.91■■□□□ 1.26
USE1-208ENST00000600970 MRC1P22897 1456 aa22.91■■□□□ 1.26
USE1-208ENST00000600970 ZC3H4Q9UPT8 1303 aaKnown RBP22.89■■□□□ 1.26
USE1-208ENST00000600970 SLC39A6Q13433 755 aa22.89■■□□□ 1.25
USE1-208ENST00000600970 NFIXQ14938 502 aa22.89■■□□□ 1.25
USE1-208ENST00000600970 COL13A1Q5TAT6 717 aaPredicted RBP22.89■■□□□ 1.25
USE1-208ENST00000600970 SMC1BQ8NDV3 1235 aa22.89■■□□□ 1.25
USE1-208ENST00000600970 NARFQ9UHQ1 456 aa22.89■■□□□ 1.25
USE1-208ENST00000600970 CCDC88AQ3V6T2 1871 aa22.89■■□□□ 1.25
USE1-208ENST00000600970 COL15A1P39059 1388 aa22.89■■□□□ 1.25
USE1-208ENST00000600970 RNMTO43148 476 aaKnown RBP22.87■■□□□ 1.25
USE1-208ENST00000600970 PRELPP51888 382 aa22.87■■□□□ 1.25
USE1-208ENST00000600970 BCL2L12Q9HB09 334 aa22.87■■□□□ 1.25
USE1-208ENST00000600970 ZBTB1Q9Y2K1 713 aa22.87■■□□□ 1.25
USE1-208ENST00000600970 CLSPNQ9HAW4 1339 aa22.86■■□□□ 1.25
USE1-208ENST00000600970 TIAM2Q8IVF5 1701 aa22.86■■□□□ 1.25
USE1-208ENST00000600970 SERPINB2P05120 415 aa22.86■■□□□ 1.25
USE1-208ENST00000600970 LMNB1P20700 586 aa22.86■■□□□ 1.25
USE1-208ENST00000600970 GLTPD2A6NH11 291 aa22.85■■□□□ 1.25
USE1-208ENST00000600970 KNSTRNQ9Y448 316 aa22.85■■□□□ 1.25
USE1-208ENST00000600970 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
USE1-208ENST00000600970 TTLL6Q8N841 843 aa22.84■■□□□ 1.25
USE1-208ENST00000600970 VEGFAP15692 232 aaPredicted RBP22.83■■□□□ 1.25
USE1-208ENST00000600970 CARMIL3Q8ND23 1372 aa22.82■■□□□ 1.24
USE1-208ENST00000600970 HMOX1P09601 288 aa22.82■■□□□ 1.24
USE1-208ENST00000600970 C2CD5Q86YS7 1000 aa22.82■■□□□ 1.24
USE1-208ENST00000600970 VSIG10Q8N0Z9 540 aa22.82■■□□□ 1.24
USE1-208ENST00000600970 MTHFSDQ2M296 383 aaKnown RBP22.81■■□□□ 1.24
USE1-208ENST00000600970 PCNTO95613 3336 aa22.8■■□□□ 1.24
USE1-208ENST00000600970 ANKRD31Q8N7Z5 1873 aa22.8■■□□□ 1.24
USE1-208ENST00000600970 NFKBIEO00221 500 aa22.8■■□□□ 1.24
USE1-208ENST00000600970 AMER1Q5JTC6 1135 aaPredicted RBP22.8■■□□□ 1.24
USE1-208ENST00000600970 H0YIN7 160 aa22.79■■□□□ 1.24
USE1-208ENST00000600970 CANXP27824 592 aaKnown RBP22.79■■□□□ 1.24
USE1-208ENST00000600970 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
USE1-208ENST00000600970 BICDL1Q6ZP65 573 aa22.78■■□□□ 1.24
USE1-208ENST00000600970 DICER1Q9UPY3 1922 aaKnown RBP22.77■■□□□ 1.24
USE1-208ENST00000600970 EIF5P55010 431 aaKnown RBP22.77■■□□□ 1.24
USE1-208ENST00000600970 POTECB2RU33 542 aa22.76■■□□□ 1.23
USE1-208ENST00000600970 TNS4Q8IZW8 715 aa22.76■■□□□ 1.23
USE1-208ENST00000600970 FER1L6Q2WGJ9 1857 aa22.75■■□□□ 1.23
USE1-208ENST00000600970 SCN7AQ01118 1682 aa22.75■■□□□ 1.23
USE1-208ENST00000600970 COL11A2P13942 1736 aaPredicted RBP22.75■■□□□ 1.23
USE1-208ENST00000600970 CAPN15O75808 1086 aa22.75■■□□□ 1.23
USE1-208ENST00000600970 STARD3NLO95772 234 aa22.74■■□□□ 1.23
USE1-208ENST00000600970 TBC1D9BQ66K14 1250 aa22.74■■□□□ 1.23
USE1-208ENST00000600970 A0A087WZG4 1122 aa22.73■■□□□ 1.23
USE1-208ENST00000600970 DIAPH1O60610 1272 aaKnown RBP22.73■■□□□ 1.23
USE1-208ENST00000600970 HSPA1AP0DMV8 641 aaKnown RBP22.73■■□□□ 1.23
USE1-208ENST00000600970 HSPA1BP0DMV9 641 aaKnown RBP22.73■■□□□ 1.23
USE1-208ENST00000600970 DPY19L2Q6NUT2 758 aa22.73■■□□□ 1.23
USE1-208ENST00000600970 TTC5Q8N0Z6 440 aa22.73■■□□□ 1.23
USE1-208ENST00000600970 ZNF622Q969S3 477 aaKnown RBP eCLIP22.73■■□□□ 1.23
USE1-208ENST00000600970 SIPA1L3O60292 1781 aaPredicted RBP22.72■■□□□ 1.23
USE1-208ENST00000600970 BRIP1Q9BX63 1249 aa22.72■■□□□ 1.23
USE1-208ENST00000600970 C21orf2O43822 256 aa22.71■■□□□ 1.23
USE1-208ENST00000600970 ZNF496Q96IT1 587 aaPredicted RBP22.71■■□□□ 1.23
USE1-208ENST00000600970 ZNF219Q9P2Y4 722 aaPredicted RBP22.71■■□□□ 1.23
USE1-208ENST00000600970 PDZRN3Q9UPQ7 1066 aa22.71■■□□□ 1.23
USE1-208ENST00000600970 CACNA1SQ13698 1873 aa22.71■■□□□ 1.23
USE1-208ENST00000600970 PDE6BP35913 854 aa22.7■■□□□ 1.22
USE1-208ENST00000600970 PRR5LQ6MZQ0 368 aa22.7■■□□□ 1.22
USE1-208ENST00000600970 CCDC24Q8N4L8 307 aa22.7■■□□□ 1.22
USE1-208ENST00000600970 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
USE1-208ENST00000600970 ERFEQ4G0M1 354 aa22.69■■□□□ 1.22
USE1-208ENST00000600970 TBC1D2BQ9UPU7 963 aa22.69■■□□□ 1.22
USE1-208ENST00000600970 ZNF790Q6PG37 636 aa22.68■■□□□ 1.22
USE1-208ENST00000600970 IL17REQ8NFR9 667 aa22.68■■□□□ 1.22
USE1-208ENST00000600970 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
USE1-208ENST00000600970 ZNF330Q9Y3S2 320 aaPredicted RBP22.68■■□□□ 1.22
USE1-208ENST00000600970 SLX4Q8IY92 1834 aa22.67■■□□□ 1.22
USE1-208ENST00000600970 TEFQ10587 303 aa22.67■■□□□ 1.22
USE1-208ENST00000600970 ARFGEF2Q9Y6D5 1785 aa22.66■■□□□ 1.22
USE1-208ENST00000600970 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
USE1-208ENST00000600970 LTBP3Q9NS15 1303 aa22.66■■□□□ 1.22
USE1-208ENST00000600970 PER1O15534 1290 aaPredicted RBP22.66■■□□□ 1.22
USE1-208ENST00000600970 IL6STP40189 918 aaPredicted RBP22.66■■□□□ 1.22
USE1-208ENST00000600970 BCORQ6W2J9 1755 aa22.66■■□□□ 1.22
USE1-208ENST00000600970 GNAT3A8MTJ3 354 aa22.65■■□□□ 1.22
USE1-208ENST00000600970 CC2D1BQ5T0F9 858 aaKnown RBP22.65■■□□□ 1.22
USE1-208ENST00000600970 COL3A1P02461 1466 aaPredicted RBP22.65■■□□□ 1.22
USE1-208ENST00000600970 A1BGP04217 495 aa22.64■■□□□ 1.21
USE1-208ENST00000600970 TAOK3Q9H2K8 898 aa22.64■■□□□ 1.21
USE1-208ENST00000600970 DDNO94850 711 aaPredicted RBP22.63■■□□□ 1.21
USE1-208ENST00000600970 CAMTA2O94983 1202 aa22.63■■□□□ 1.21
USE1-208ENST00000600970 CHADLQ6NUI6 762 aa22.63■■□□□ 1.21
USE1-208ENST00000600970 CNBD1Q8NA66 436 aa22.63■■□□□ 1.21
USE1-208ENST00000600970 GAS2L2Q8NHY3 880 aa22.63■■□□□ 1.21
USE1-208ENST00000600970 CNKSR1Q969H4 720 aa22.63■■□□□ 1.21
USE1-208ENST00000600970 FMNL2Q96PY5 1086 aa22.63■■□□□ 1.21
USE1-208ENST00000600970 SETDB2Q96T68 719 aa22.63■■□□□ 1.21
USE1-208ENST00000600970 POTEIP0CG38 1075 aa22.62■■□□□ 1.21
USE1-208ENST00000600970 POTEJP0CG39 1038 aa22.62■■□□□ 1.21
USE1-208ENST00000600970 STYK1Q6J9G0 422 aa22.62■■□□□ 1.21
USE1-208ENST00000600970 CREBZFQ9NS37 354 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms