RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 CALCOCO1Q9P1Z2 691 aa19.15■□□□□ 0.66
SYDE1-204ENST00000600440 MYOM2P54296 1465 aa19.15■□□□□ 0.66
SYDE1-204ENST00000600440 ANAPC15P60006 121 aa19.14■□□□□ 0.66
SYDE1-204ENST00000600440 PTPN14Q15678 1187 aa19.14■□□□□ 0.66
SYDE1-204ENST00000600440 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.66
SYDE1-204ENST00000600440 RUFY3Q7L099 469 aa19.14■□□□□ 0.66
SYDE1-204ENST00000600440 DNAJC2Q99543 621 aaKnown RBP19.14■□□□□ 0.66
SYDE1-204ENST00000600440 GORABQ5T7V8 394 aa19.14■□□□□ 0.65
SYDE1-204ENST00000600440 RASEFQ8IZ41 740 aa19.14■□□□□ 0.65
SYDE1-204ENST00000600440 NOL10Q9BSC4 688 aaKnown RBP19.14■□□□□ 0.65
SYDE1-204ENST00000600440 COL3A1P02461 1466 aaPredicted RBP19.14■□□□□ 0.65
SYDE1-204ENST00000600440 TNNT3P45378 269 aaPredicted RBP19.14■□□□□ 0.65
SYDE1-204ENST00000600440 RRS1Q15050 365 aaKnown RBP19.14■□□□□ 0.65
SYDE1-204ENST00000600440 G2E3Q7L622 706 aa19.14■□□□□ 0.65
SYDE1-204ENST00000600440 KIAA1210Q9ULL0 1709 aa19.13■□□□□ 0.65
SYDE1-204ENST00000600440 ARHGEF40Q8TER5 1519 aa19.13■□□□□ 0.65
SYDE1-204ENST00000600440 ZNF75DP51815 510 aa19.13■□□□□ 0.65
SYDE1-204ENST00000600440 LIMCH1Q9UPQ0 1083 aa19.13■□□□□ 0.65
SYDE1-204ENST00000600440 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
SYDE1-204ENST00000600440 CWC27Q6UX04 472 aaKnown RBP19.13■□□□□ 0.65
SYDE1-204ENST00000600440 PRAM1Q96QH2 718 aa19.13■□□□□ 0.65
SYDE1-204ENST00000600440 ZRANB1Q9UGI0 708 aa19.13■□□□□ 0.65
SYDE1-204ENST00000600440 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
SYDE1-204ENST00000600440 TTC6Q86TZ1 520 aa19.12■□□□□ 0.65
SYDE1-204ENST00000600440 REREQ9P2R6 1566 aa19.12■□□□□ 0.65
SYDE1-204ENST00000600440 A0A087WWV3 80 aa19.12■□□□□ 0.65
SYDE1-204ENST00000600440 PNMA6EA0A0J9YXQ4 647 aa19.12■□□□□ 0.65
SYDE1-204ENST00000600440 ZNF165P49910 485 aa19.12■□□□□ 0.65
SYDE1-204ENST00000600440 HNRNPH2P55795 449 aaKnown RBP19.11■□□□□ 0.65
SYDE1-204ENST00000600440 BICD2Q8TD16 824 aa19.11■□□□□ 0.65
SYDE1-204ENST00000600440 TMX1Q9H3N1 280 aa19.11■□□□□ 0.65
SYDE1-204ENST00000600440 MTMR6Q9Y217 621 aa19.11■□□□□ 0.65
SYDE1-204ENST00000600440 SNX14Q9Y5W7 946 aa19.11■□□□□ 0.65
SYDE1-204ENST00000600440 NEK11Q8NG66 645 aa19.11■□□□□ 0.65
SYDE1-204ENST00000600440 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
SYDE1-204ENST00000600440 SKILP12757 684 aa19.1■□□□□ 0.65
SYDE1-204ENST00000600440 FAM135BQ49AJ0 1406 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 TULP4Q9NRJ4 1543 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 HSPA4P34932 840 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 ERCC6LQ2NKX8 1250 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 TCEANC2Q96MN5 208 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 RAD50Q92878 1312 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 GOLGA6L19H0YKK7 550 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 SOX12O15370 315 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 CEBPZQ03701 1054 aaKnown RBP19.09■□□□□ 0.65
SYDE1-204ENST00000600440 LMOD3Q0VAK6 560 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 LARP1BQ659C4 914 aaKnown RBP19.09■□□□□ 0.65
SYDE1-204ENST00000600440 OSBPL3Q9H4L5 887 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 GNAI2P04899 355 aa19.09■□□□□ 0.65
SYDE1-204ENST00000600440 JAKMIP1Q96N16 626 aaKnown RBP19.09■□□□□ 0.65
SYDE1-204ENST00000600440 PLCH2O75038 1416 aa19.08■□□□□ 0.65
SYDE1-204ENST00000600440 KRT85P78386 507 aa19.08■□□□□ 0.65
SYDE1-204ENST00000600440 SYCP1Q15431 976 aa19.08■□□□□ 0.65
SYDE1-204ENST00000600440 KIF1BO60333 1816 aa19.07■□□□□ 0.64
SYDE1-204ENST00000600440 CDC37L1Q7L3B6 337 aa19.07■□□□□ 0.64
SYDE1-204ENST00000600440 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
SYDE1-204ENST00000600440 ZNF446Q9NWS9 450 aa19.06■□□□□ 0.64
SYDE1-204ENST00000600440 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
SYDE1-204ENST00000600440 FOSBP53539 338 aa19.06■□□□□ 0.64
SYDE1-204ENST00000600440 STK3Q13188 491 aa19.06■□□□□ 0.64
SYDE1-204ENST00000600440 LRRN4CLQ8ND94 238 aa19.06■□□□□ 0.64
SYDE1-204ENST00000600440 SPATA32Q96LK8 384 aa19.06■□□□□ 0.64
SYDE1-204ENST00000600440 CDK19Q9BWU1 502 aa19.06■□□□□ 0.64
SYDE1-204ENST00000600440 PRPF40BQ6NWY9 871 aaKnown RBP19.05■□□□□ 0.64
SYDE1-204ENST00000600440 PDRG1Q9NUG6 133 aa19.05■□□□□ 0.64
SYDE1-204ENST00000600440 NME9Q86XW9 330 aa19.05■□□□□ 0.64
SYDE1-204ENST00000600440 TET3O43151 1660 aa19.05■□□□□ 0.64
SYDE1-204ENST00000600440 SLU7O95391 586 aaKnown RBP19.04■□□□□ 0.64
SYDE1-204ENST00000600440 ADCK5Q3MIX3 580 aa19.04■□□□□ 0.64
SYDE1-204ENST00000600440 LRRC8AQ8IWT6 810 aa19.04■□□□□ 0.64
SYDE1-204ENST00000600440 CCDC69A6NI79 296 aa19.04■□□□□ 0.64
SYDE1-204ENST00000600440 BECN2A8MW95 431 aa19.04■□□□□ 0.64
SYDE1-204ENST00000600440 NR1I2O75469 434 aa19.04■□□□□ 0.64
SYDE1-204ENST00000600440 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
SYDE1-204ENST00000600440 ERO1AQ96HE7 468 aa19.04■□□□□ 0.64
SYDE1-204ENST00000600440 MYO3AQ8NEV4 1616 aa19.04■□□□□ 0.64
SYDE1-204ENST00000600440 RAD51AP2Q09MP3 1159 aa19.03■□□□□ 0.64
SYDE1-204ENST00000600440 SULT6B1Q6IMI4 303 aa19.03■□□□□ 0.64
SYDE1-204ENST00000600440 PLA2G4DQ86XP0 818 aa19.03■□□□□ 0.64
SYDE1-204ENST00000600440 ERCC4Q92889 916 aaPredicted RBP19.03■□□□□ 0.64
SYDE1-204ENST00000600440 VGFO15240 615 aaPredicted RBP19.03■□□□□ 0.64
SYDE1-204ENST00000600440 TTC14Q96N46 770 aa19.03■□□□□ 0.64
SYDE1-204ENST00000600440 IL13P35225 146 aa19.02■□□□□ 0.64
SYDE1-204ENST00000600440 USP32Q8NFA0 1604 aa19.02■□□□□ 0.64
SYDE1-204ENST00000600440 SURF6O75683 361 aaKnown RBP19.02■□□□□ 0.64
SYDE1-204ENST00000600440 BMS1Q14692 1282 aaKnown RBP19.02■□□□□ 0.64
SYDE1-204ENST00000600440 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
SYDE1-204ENST00000600440 ARHGAP29Q52LW3 1261 aa19.02■□□□□ 0.63
SYDE1-204ENST00000600440 SYT10Q6XYQ8 523 aa19.02■□□□□ 0.63
SYDE1-204ENST00000600440 C10orf67Q8IYJ2 551 aa19.02■□□□□ 0.63
SYDE1-204ENST00000600440 PNPLA6Q8IY17 1366 aa19.01■□□□□ 0.63
SYDE1-204ENST00000600440 CCDC171Q6TFL3 1326 aa19.01■□□□□ 0.63
SYDE1-204ENST00000600440 HTATSF1O43719 755 aaKnown RBP19.01■□□□□ 0.63
SYDE1-204ENST00000600440 ME3Q16798 604 aa19.01■□□□□ 0.63
SYDE1-204ENST00000600440 ZCCHC17Q9NP64 241 aaKnown RBP19.01■□□□□ 0.63
SYDE1-204ENST00000600440 FEZ2Q9UHY8 353 aaPredicted RBP19.01■□□□□ 0.63
SYDE1-204ENST00000600440 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
SYDE1-204ENST00000600440 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
SYDE1-204ENST00000600440 CHMP4CQ96CF2 233 aa19■□□□□ 0.63
SYDE1-204ENST00000600440 DDX11Q96FC9 970 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms