RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 MLLT1Q03111 559 aaPredicted RBP24.66■■□□□ 1.54
SSBP4-207ENST00000600244 ADAMTS7Q9UKP4 1686 aa24.65■■□□□ 1.54
SSBP4-207ENST00000600244 INTS5Q6P9B9 1019 aaKnown RBP24.64■■□□□ 1.54
SSBP4-207ENST00000600244 DLEC1Q9Y238 1755 aa24.63■■□□□ 1.53
SSBP4-207ENST00000600244 PTCD1O75127 700 aaKnown RBP24.63■■□□□ 1.53
SSBP4-207ENST00000600244 HSPA8P11142 646 aaKnown RBP24.63■■□□□ 1.53
SSBP4-207ENST00000600244 PPM1GO15355 546 aaPredicted RBP24.62■■□□□ 1.53
SSBP4-207ENST00000600244 HSP90AB1P08238 724 aaKnown RBP24.62■■□□□ 1.53
SSBP4-207ENST00000600244 NFIXQ14938 502 aa24.62■■□□□ 1.53
SSBP4-207ENST00000600244 USPL1Q5W0Q7 1092 aa24.62■■□□□ 1.53
SSBP4-207ENST00000600244 VIRMAQ69YN4 1812 aaKnown RBP24.62■■□□□ 1.53
SSBP4-207ENST00000600244 KIF20BQ96Q89 1820 aa24.62■■□□□ 1.53
SSBP4-207ENST00000600244 CABP4P57796 275 aa24.61■■□□□ 1.53
SSBP4-207ENST00000600244 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
SSBP4-207ENST00000600244 ERFEQ4G0M1 354 aa24.61■■□□□ 1.53
SSBP4-207ENST00000600244 AFDNP55196 1824 aaKnown RBP24.61■■□□□ 1.53
SSBP4-207ENST00000600244 NRXN2Q9P2S2 1712 aa24.61■■□□□ 1.53
SSBP4-207ENST00000600244 ANKRD26Q9UPS8 1709 aa24.6■■□□□ 1.53
SSBP4-207ENST00000600244 TMEM88BA6NKF7 163 aa24.59■■□□□ 1.53
SSBP4-207ENST00000600244 ZPR1O75312 459 aa24.59■■□□□ 1.53
SSBP4-207ENST00000600244 C2CD5Q86YS7 1000 aa24.59■■□□□ 1.53
SSBP4-207ENST00000600244 DDNO94850 711 aaPredicted RBP24.58■■□□□ 1.53
SSBP4-207ENST00000600244 ITGBL1O95965 494 aaPredicted RBP24.58■■□□□ 1.53
SSBP4-207ENST00000600244 DICER1Q9UPY3 1922 aaKnown RBP24.58■■□□□ 1.53
SSBP4-207ENST00000600244 H0YIN7 160 aa24.57■■□□□ 1.52
SSBP4-207ENST00000600244 SERPINB2P05120 415 aa24.57■■□□□ 1.52
SSBP4-207ENST00000600244 LDHDQ86WU2 507 aa24.57■■□□□ 1.52
SSBP4-207ENST00000600244 CARD14Q9BXL6 1004 aa24.57■■□□□ 1.52
SSBP4-207ENST00000600244 TJP1Q07157 1748 aa24.56■■□□□ 1.52
SSBP4-207ENST00000600244 SOS1Q07889 1333 aaPredicted RBP24.56■■□□□ 1.52
SSBP4-207ENST00000600244 BCL2L12Q9HB09 334 aa24.55■■□□□ 1.52
SSBP4-207ENST00000600244 CCDC85CA6NKD9 419 aa24.54■■□□□ 1.52
SSBP4-207ENST00000600244 POLKQ9UBT6 870 aa24.54■■□□□ 1.52
SSBP4-207ENST00000600244 NARFQ9UHQ1 456 aa24.54■■□□□ 1.52
SSBP4-207ENST00000600244 LTBP3Q9NS15 1303 aa24.54■■□□□ 1.52
SSBP4-207ENST00000600244 RASSF10A6NK89 507 aa24.53■■□□□ 1.52
SSBP4-207ENST00000600244 EIF4A2Q14240 407 aaKnown RBP24.53■■□□□ 1.52
SSBP4-207ENST00000600244 NFATC2IPQ8NCF5 419 aa24.53■■□□□ 1.52
SSBP4-207ENST00000600244 FER1L6Q2WGJ9 1857 aa24.53■■□□□ 1.52
SSBP4-207ENST00000600244 CARMIL3Q8ND23 1372 aa24.53■■□□□ 1.52
SSBP4-207ENST00000600244 C21orf2O43822 256 aa24.52■■□□□ 1.52
SSBP4-207ENST00000600244 MAP2K1Q02750 393 aaPredicted RBP24.52■■□□□ 1.52
SSBP4-207ENST00000600244 PLEKHO1Q53GL0 409 aaPredicted RBP24.52■■□□□ 1.52
SSBP4-207ENST00000600244 TAF1DQ9H5J8 278 aaPredicted RBP24.52■■□□□ 1.52
SSBP4-207ENST00000600244 IQCA1LA6NCM1 817 aa24.51■■□□□ 1.51
SSBP4-207ENST00000600244 DEFB115Q30KQ5 88 aa24.51■■□□□ 1.51
SSBP4-207ENST00000600244 L3MBTL3Q96JM7 780 aaPredicted RBP24.51■■□□□ 1.51
SSBP4-207ENST00000600244 MTHFSP49914 203 aa24.5■■□□□ 1.51
SSBP4-207ENST00000600244 ZNF530Q6P9A1 599 aaPredicted RBP24.5■■□□□ 1.51
SSBP4-207ENST00000600244 DNAJC10Q8IXB1 793 aa24.5■■□□□ 1.51
SSBP4-207ENST00000600244 WDR33Q9C0J8 1336 aaKnown RBP24.48■■□□□ 1.51
SSBP4-207ENST00000600244 ZNF219Q9P2Y4 722 aaPredicted RBP24.48■■□□□ 1.51
SSBP4-207ENST00000600244 CYP19A1P11511 503 aaPredicted RBP24.47■■□□□ 1.51
SSBP4-207ENST00000600244 AMOTQ4VCS5 1084 aa24.47■■□□□ 1.51
SSBP4-207ENST00000600244 ZNF622Q969S3 477 aaKnown RBP eCLIP24.47■■□□□ 1.51
SSBP4-207ENST00000600244 TAOK3Q9H2K8 898 aa24.47■■□□□ 1.51
SSBP4-207ENST00000600244 SCN4AP35499 1836 aa24.47■■□□□ 1.51
SSBP4-207ENST00000600244 PDZRN3Q9UPQ7 1066 aa24.46■■□□□ 1.51
SSBP4-207ENST00000600244 COL15A1P39059 1388 aa24.44■■□□□ 1.5
SSBP4-207ENST00000600244 BRIP1Q9BX63 1249 aa24.44■■□□□ 1.5
SSBP4-207ENST00000600244 ANKRD31Q8N7Z5 1873 aa24.43■■□□□ 1.5
SSBP4-207ENST00000600244 PDE6BP35913 854 aa24.42■■□□□ 1.5
SSBP4-207ENST00000600244 ZBTB1Q9Y2K1 713 aa24.42■■□□□ 1.5
SSBP4-207ENST00000600244 ADAMTSL1Q8N6G6 1762 aa24.42■■□□□ 1.5
SSBP4-207ENST00000600244 EAPPQ56P03 285 aaPredicted RBP24.41■■□□□ 1.5
SSBP4-207ENST00000600244 C1orf141Q5JVX7 400 aa24.4■■□□□ 1.5
SSBP4-207ENST00000600244 CNTROBQ8N137 903 aa24.4■■□□□ 1.5
SSBP4-207ENST00000600244 BICDL1Q6ZP65 573 aa24.39■■□□□ 1.49
SSBP4-207ENST00000600244 CLEC11AQ9Y240 323 aa24.39■■□□□ 1.49
SSBP4-207ENST00000600244 HACL1Q9UJ83 578 aa24.38■■□□□ 1.49
SSBP4-207ENST00000600244 CDCA8Q53HL2 280 aa24.37■■□□□ 1.49
SSBP4-207ENST00000600244 MAP1SQ66K74 1059 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-207ENST00000600244 PRR5LQ6MZQ0 368 aa24.37■■□□□ 1.49
SSBP4-207ENST00000600244 COL11A2P13942 1736 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-207ENST00000600244 THSD7BQ9C0I4 1608 aa24.36■■□□□ 1.49
SSBP4-207ENST00000600244 SLX4Q8IY92 1834 aa24.36■■□□□ 1.49
SSBP4-207ENST00000600244 EPHX2P34913 555 aa24.36■■□□□ 1.49
SSBP4-207ENST00000600244 SOGA3Q5TF21 947 aa24.36■■□□□ 1.49
SSBP4-207ENST00000600244 CNKSR1Q969H4 720 aa24.36■■□□□ 1.49
SSBP4-207ENST00000600244 ABT1Q9ULW3 272 aaKnown RBP24.36■■□□□ 1.49
SSBP4-207ENST00000600244 PDE4DIPQ5VU43 2346 aa24.36■■□□□ 1.49
SSBP4-207ENST00000600244 TNRC18O15417 2968 aaPredicted RBP24.35■■□□□ 1.49
SSBP4-207ENST00000600244 TBC1D9BQ66K14 1250 aa24.35■■□□□ 1.49
SSBP4-207ENST00000600244 STYK1Q6J9G0 422 aa24.35■■□□□ 1.49
SSBP4-207ENST00000600244 PRPF40BQ6NWY9 871 aaKnown RBP24.35■■□□□ 1.49
SSBP4-207ENST00000600244 PNMA8AQ86V59 439 aaPredicted RBP24.35■■□□□ 1.49
SSBP4-207ENST00000600244 CCDC24Q8N4L8 307 aa24.35■■□□□ 1.49
SSBP4-207ENST00000600244 ZNF541Q9H0D2 1346 aa24.35■■□□□ 1.49
SSBP4-207ENST00000600244 AEBP1Q8IUX7 1158 aa24.34■■□□□ 1.49
SSBP4-207ENST00000600244 C7orf43Q8WVR3 580 aa24.34■■□□□ 1.49
SSBP4-207ENST00000600244 CAPNS2Q96L46 248 aa24.34■■□□□ 1.49
SSBP4-207ENST00000600244 BEGAINQ9BUH8 593 aa24.34■■□□□ 1.49
SSBP4-207ENST00000600244 SRGNP10124 158 aa24.33■■□□□ 1.49
SSBP4-207ENST00000600244 EIF5P55010 431 aaKnown RBP24.33■■□□□ 1.49
SSBP4-207ENST00000600244 MCOLN1Q9GZU1 580 aa24.33■■□□□ 1.49
SSBP4-207ENST00000600244 SLC52A2Q9HAB3 445 aa24.33■■□□□ 1.49
SSBP4-207ENST00000600244 SCN11AQ9UI33 1791 aa24.33■■□□□ 1.49
SSBP4-207ENST00000600244 SLC39A6Q13433 755 aa24.32■■□□□ 1.48
SSBP4-207ENST00000600244 GPR101Q96P66 508 aaPredicted RBP24.32■■□□□ 1.48
SSBP4-207ENST00000600244 DDX21Q9NR30 783 aaKnown RBP eCLIP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms