RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 CCDC88AQ3V6T2 1871 aa19.13■□□□□ 0.65
HOMER3-212ENST00000600077 HSPA8P11142 646 aaKnown RBP19.12■□□□□ 0.65
HOMER3-212ENST00000600077 MAP2K1Q02750 393 aaPredicted RBP19.12■□□□□ 0.65
HOMER3-212ENST00000600077 EMILIN1Q9Y6C2 1016 aa19.12■□□□□ 0.65
HOMER3-212ENST00000600077 IQCA1LA6NCM1 817 aa19.11■□□□□ 0.65
HOMER3-212ENST00000600077 H0YIN7 160 aa19.11■□□□□ 0.65
HOMER3-212ENST00000600077 LDHDQ86WU2 507 aa19.11■□□□□ 0.65
HOMER3-212ENST00000600077 WASHC2AQ641Q2 1341 aa19.1■□□□□ 0.65
HOMER3-212ENST00000600077 PPM1GO15355 546 aaPredicted RBP19.1■□□□□ 0.65
HOMER3-212ENST00000600077 CABP4P57796 275 aa19.1■□□□□ 0.65
HOMER3-212ENST00000600077 TESK2Q96S53 571 aa19.1■□□□□ 0.65
HOMER3-212ENST00000600077 POTEIP0CG38 1075 aa19.09■□□□□ 0.65
HOMER3-212ENST00000600077 POTEJP0CG39 1038 aa19.09■□□□□ 0.65
HOMER3-212ENST00000600077 C2CD5Q86YS7 1000 aa19.09■□□□□ 0.65
HOMER3-212ENST00000600077 VIRMAQ69YN4 1812 aaKnown RBP19.09■□□□□ 0.65
HOMER3-212ENST00000600077 DLEC1Q9Y238 1755 aa19.09■□□□□ 0.65
HOMER3-212ENST00000600077 PTCD1O75127 700 aaKnown RBP19.08■□□□□ 0.64
HOMER3-212ENST00000600077 USPL1Q5W0Q7 1092 aa19.08■□□□□ 0.64
HOMER3-212ENST00000600077 DEFB115Q30KQ5 88 aa19.07■□□□□ 0.64
HOMER3-212ENST00000600077 PDZRN3Q9UPQ7 1066 aa19.07■□□□□ 0.64
HOMER3-212ENST00000600077 DICER1Q9UPY3 1922 aaKnown RBP19.06■□□□□ 0.64
HOMER3-212ENST00000600077 RASSF10A6NK89 507 aa19.06■□□□□ 0.64
HOMER3-212ENST00000600077 DDNO94850 711 aaPredicted RBP19.06■□□□□ 0.64
HOMER3-212ENST00000600077 SERPINB2P05120 415 aa19.06■□□□□ 0.64
HOMER3-212ENST00000600077 NFIXQ14938 502 aa19.06■□□□□ 0.64
HOMER3-212ENST00000600077 KIF20BQ96Q89 1820 aa19.06■□□□□ 0.64
HOMER3-212ENST00000600077 ST20-MTHFSA0A0A6YYL1 179 aa19.05■□□□□ 0.64
HOMER3-212ENST00000600077 INTS5Q6P9B9 1019 aaKnown RBP19.05■□□□□ 0.64
HOMER3-212ENST00000600077 LTBP3Q9NS15 1303 aa19.04■□□□□ 0.64
HOMER3-212ENST00000600077 ITGBL1O95965 494 aaPredicted RBP19.04■□□□□ 0.64
HOMER3-212ENST00000600077 PLEKHO1Q53GL0 409 aaPredicted RBP19.04■□□□□ 0.64
HOMER3-212ENST00000600077 BEGAINQ9BUH8 593 aa19.04■□□□□ 0.64
HOMER3-212ENST00000600077 NRXN2Q9P2S2 1712 aa19.04■□□□□ 0.64
HOMER3-212ENST00000600077 NARFQ9UHQ1 456 aa19.04■□□□□ 0.64
HOMER3-212ENST00000600077 WDR33Q9C0J8 1336 aaKnown RBP19.03■□□□□ 0.64
HOMER3-212ENST00000600077 AFDNP55196 1824 aaKnown RBP19.03■□□□□ 0.64
HOMER3-212ENST00000600077 L3MBTL3Q96JM7 780 aaPredicted RBP19.03■□□□□ 0.64
HOMER3-212ENST00000600077 TAOK3Q9H2K8 898 aa19.03■□□□□ 0.64
HOMER3-212ENST00000600077 TAF1DQ9H5J8 278 aaPredicted RBP19.03■□□□□ 0.64
HOMER3-212ENST00000600077 C21orf2O43822 256 aa19.02■□□□□ 0.64
HOMER3-212ENST00000600077 ADAMTS7Q9UKP4 1686 aa19.01■□□□□ 0.63
HOMER3-212ENST00000600077 AMOTQ4VCS5 1084 aa19.01■□□□□ 0.63
HOMER3-212ENST00000600077 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.63
HOMER3-212ENST00000600077 SCN4AP35499 1836 aa19.01■□□□□ 0.63
HOMER3-212ENST00000600077 SOS1Q07889 1333 aaPredicted RBP19■□□□□ 0.63
HOMER3-212ENST00000600077 ANKRD26Q9UPS8 1709 aa19■□□□□ 0.63
HOMER3-212ENST00000600077 MTHFSP49914 203 aa19■□□□□ 0.63
HOMER3-212ENST00000600077 FER1L6Q2WGJ9 1857 aa18.99■□□□□ 0.63
HOMER3-212ENST00000600077 PDE6BP35913 854 aa18.99■□□□□ 0.63
HOMER3-212ENST00000600077 SOGA3Q5TF21 947 aa18.99■□□□□ 0.63
HOMER3-212ENST00000600077 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
HOMER3-212ENST00000600077 NFATC2IPQ8NCF5 419 aa18.99■□□□□ 0.63
HOMER3-212ENST00000600077 CLEC11AQ9Y240 323 aa18.99■□□□□ 0.63
HOMER3-212ENST00000600077 TJP1Q07157 1748 aa18.98■□□□□ 0.63
HOMER3-212ENST00000600077 EAPPQ56P03 285 aaPredicted RBP18.98■□□□□ 0.63
HOMER3-212ENST00000600077 CFAP44Q96MT7 982 aa18.98■□□□□ 0.63
HOMER3-212ENST00000600077 ECE1P42892 770 aa18.97■□□□□ 0.63
HOMER3-212ENST00000600077 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
HOMER3-212ENST00000600077 C1orf141Q5JVX7 400 aa18.97■□□□□ 0.63
HOMER3-212ENST00000600077 PNMA8AQ86V59 439 aaPredicted RBP18.97■□□□□ 0.63
HOMER3-212ENST00000600077 BRIP1Q9BX63 1249 aa18.97■□□□□ 0.63
HOMER3-212ENST00000600077 ZNF219Q9P2Y4 722 aaPredicted RBP18.97■□□□□ 0.63
HOMER3-212ENST00000600077 ABT1Q9ULW3 272 aaKnown RBP18.97■□□□□ 0.63
HOMER3-212ENST00000600077 COL15A1P39059 1388 aa18.96■□□□□ 0.63
HOMER3-212ENST00000600077 EIF4A2Q14240 407 aaKnown RBP18.96■□□□□ 0.63
HOMER3-212ENST00000600077 DNAJC10Q8IXB1 793 aa18.96■□□□□ 0.63
HOMER3-212ENST00000600077 HACL1Q9UJ83 578 aa18.96■□□□□ 0.63
HOMER3-212ENST00000600077 CARMIL3Q8ND23 1372 aa18.95■□□□□ 0.62
HOMER3-212ENST00000600077 CNTROBQ8N137 903 aa18.95■□□□□ 0.62
HOMER3-212ENST00000600077 CNKSR1Q969H4 720 aa18.95■□□□□ 0.62
HOMER3-212ENST00000600077 BCL2L12Q9HB09 334 aa18.95■□□□□ 0.62
HOMER3-212ENST00000600077 POLKQ9UBT6 870 aa18.95■□□□□ 0.62
HOMER3-212ENST00000600077 CYP19A1P11511 503 aaPredicted RBP18.93■□□□□ 0.62
HOMER3-212ENST00000600077 EPHX2P34913 555 aa18.93■□□□□ 0.62
HOMER3-212ENST00000600077 CARD14Q9BXL6 1004 aa18.92■□□□□ 0.62
HOMER3-212ENST00000600077 CA12O43570 354 aa18.91■□□□□ 0.62
HOMER3-212ENST00000600077 BICDL1Q6ZP65 573 aa18.91■□□□□ 0.62
HOMER3-212ENST00000600077 CAPNS2Q96L46 248 aa18.91■□□□□ 0.62
HOMER3-212ENST00000600077 GPR101Q96P66 508 aaPredicted RBP18.91■□□□□ 0.62
HOMER3-212ENST00000600077 MCOLN1Q9GZU1 580 aa18.91■□□□□ 0.62
HOMER3-212ENST00000600077 A0A087WZG4 1122 aa18.9■□□□□ 0.62
HOMER3-212ENST00000600077 MAP1SQ66K74 1059 aaPredicted RBP18.9■□□□□ 0.62
HOMER3-212ENST00000600077 STYK1Q6J9G0 422 aa18.9■□□□□ 0.62
HOMER3-212ENST00000600077 PAXIP1Q6ZW49 1069 aaPredicted RBP18.9■□□□□ 0.62
HOMER3-212ENST00000600077 ZBTB1Q9Y2K1 713 aa18.9■□□□□ 0.62
HOMER3-212ENST00000600077 THSD7BQ9C0I4 1608 aa18.89■□□□□ 0.62
HOMER3-212ENST00000600077 ADAMTSL1Q8N6G6 1762 aa18.89■□□□□ 0.61
HOMER3-212ENST00000600077 MAP2K2P36507 400 aa18.89■□□□□ 0.61
HOMER3-212ENST00000600077 DDX21Q9NR30 783 aaKnown RBP eCLIP18.89■□□□□ 0.61
HOMER3-212ENST00000600077 PDE4DIPQ5VU43 2346 aa18.88■□□□□ 0.61
HOMER3-212ENST00000600077 PRPF40BQ6NWY9 871 aaKnown RBP18.88■□□□□ 0.61
HOMER3-212ENST00000600077 PRR5LQ6MZQ0 368 aa18.87■□□□□ 0.61
HOMER3-212ENST00000600077 ANKRD31Q8N7Z5 1873 aa18.87■□□□□ 0.61
HOMER3-212ENST00000600077 MASTLQ96GX5 879 aa18.87■□□□□ 0.61
HOMER3-212ENST00000600077 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
HOMER3-212ENST00000600077 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
HOMER3-212ENST00000600077 ZNF541Q9H0D2 1346 aa18.85■□□□□ 0.61
HOMER3-212ENST00000600077 NPHP1O15259 732 aa18.85■□□□□ 0.61
HOMER3-212ENST00000600077 SRGNP10124 158 aa18.85■□□□□ 0.61
HOMER3-212ENST00000600077 TBC1D9BQ66K14 1250 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms