RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 USP16Q9Y5T5 823 aa19.19■□□□□ 0.66
VRK3-218ENST00000600031 UBR2Q8IWV8 1755 aa19.19■□□□□ 0.66
VRK3-218ENST00000600031 FKBP5Q13451 457 aaPredicted RBP19.19■□□□□ 0.66
VRK3-218ENST00000600031 DBF4Q9UBU7 674 aaPredicted RBP19.19■□□□□ 0.66
VRK3-218ENST00000600031 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
VRK3-218ENST00000600031 KCPQ6ZWJ8 1503 aa19.19■□□□□ 0.66
VRK3-218ENST00000600031 ZBTB7BO15156 539 aaPredicted RBP19.18■□□□□ 0.66
VRK3-218ENST00000600031 PROSER3Q2NL68 480 aa19.18■□□□□ 0.66
VRK3-218ENST00000600031 INTS3Q68E01 1043 aaKnown RBP19.18■□□□□ 0.66
VRK3-218ENST00000600031 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
VRK3-218ENST00000600031 ZBTB47Q9UFB7 747 aaPredicted RBP19.18■□□□□ 0.66
VRK3-218ENST00000600031 ASAP1Q9ULH1 1129 aa19.18■□□□□ 0.66
VRK3-218ENST00000600031 BCL9O00512 1426 aa19.17■□□□□ 0.66
VRK3-218ENST00000600031 PTCD1O75127 700 aaKnown RBP19.17■□□□□ 0.66
VRK3-218ENST00000600031 PRIM1P49642 420 aaKnown RBP19.17■□□□□ 0.66
VRK3-218ENST00000600031 GJD4Q96KN9 370 aaPredicted RBP19.17■□□□□ 0.66
VRK3-218ENST00000600031 PDIA6Q15084 440 aa19.16■□□□□ 0.66
VRK3-218ENST00000600031 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
VRK3-218ENST00000600031 ATG3Q9NT62 314 aa19.16■□□□□ 0.66
VRK3-218ENST00000600031 DOT1LQ8TEK3 1739 aa19.16■□□□□ 0.66
VRK3-218ENST00000600031 KDM2BQ8NHM5 1336 aa19.16■□□□□ 0.66
VRK3-218ENST00000600031 SLC4A10Q6U841 1118 aa19.16■□□□□ 0.66
VRK3-218ENST00000600031 ATRNO75882 1429 aa19.15■□□□□ 0.66
VRK3-218ENST00000600031 IGHDP01880 384 aa19.15■□□□□ 0.66
VRK3-218ENST00000600031 DDX21Q9NR30 783 aaKnown RBP eCLIP19.15■□□□□ 0.66
VRK3-218ENST00000600031 A0A0G2JS52 829 aa19.15■□□□□ 0.66
VRK3-218ENST00000600031 TRPC5Q9UL62 973 aaPredicted RBP19.15■□□□□ 0.66
VRK3-218ENST00000600031 ACSBG1Q96GR2 724 aa19.14■□□□□ 0.65
VRK3-218ENST00000600031 PDE4AP27815 886 aa19.13■□□□□ 0.65
VRK3-218ENST00000600031 HYPKQ9NX55 129 aa19.13■□□□□ 0.65
VRK3-218ENST00000600031 THSD7AQ9UPZ6 1657 aa19.13■□□□□ 0.65
VRK3-218ENST00000600031 BCL11AQ9H165 835 aa19.13■□□□□ 0.65
VRK3-218ENST00000600031 LAMB4A4D0S4 1761 aa19.12■□□□□ 0.65
VRK3-218ENST00000600031 CENPQQ7L2Z9 268 aaPredicted RBP19.12■□□□□ 0.65
VRK3-218ENST00000600031 BACH2Q9BYV9 841 aa19.12■□□□□ 0.65
VRK3-218ENST00000600031 MYL6BP14649 208 aa19.12■□□□□ 0.65
VRK3-218ENST00000600031 PIP4K2AP48426 406 aaPredicted RBP19.12■□□□□ 0.65
VRK3-218ENST00000600031 CCT4P50991 539 aaKnown RBP19.12■□□□□ 0.65
VRK3-218ENST00000600031 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
VRK3-218ENST00000600031 PI4KAP2A4QPH2 592 aa19.11■□□□□ 0.65
VRK3-218ENST00000600031 PI4KAP1Q8N8J0 262 aa19.11■□□□□ 0.65
VRK3-218ENST00000600031 QTRT2Q9H974 415 aaKnown RBP19.11■□□□□ 0.65
VRK3-218ENST00000600031 LRP10Q7Z4F1 713 aa19.1■□□□□ 0.65
VRK3-218ENST00000600031 C1orf115Q9H7X2 142 aa19.1■□□□□ 0.65
VRK3-218ENST00000600031 ADCY9O60503 1353 aa19.1■□□□□ 0.65
VRK3-218ENST00000600031 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
VRK3-218ENST00000600031 ONECUT3O60422 494 aaPredicted RBP19.09■□□□□ 0.65
VRK3-218ENST00000600031 AIMP1Q12904 312 aaKnown RBP19.09■□□□□ 0.65
VRK3-218ENST00000600031 PXDNLA1KZ92 1463 aa19.09■□□□□ 0.65
VRK3-218ENST00000600031 DNAAF4Q8WXU2 420 aa19.09■□□□□ 0.65
VRK3-218ENST00000600031 MEIS3Q99687 375 aa19.09■□□□□ 0.65
VRK3-218ENST00000600031 NBPF26B4DH59 902 aa19.08■□□□□ 0.64
VRK3-218ENST00000600031 KCNQ2O43526 872 aa19.08■□□□□ 0.64
VRK3-218ENST00000600031 NBPF14Q5TI25 921 aa19.08■□□□□ 0.64
VRK3-218ENST00000600031 NBPF10Q6P3W6 841 aaKnown RBP19.08■□□□□ 0.64
VRK3-218ENST00000600031 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.64
VRK3-218ENST00000600031 NBPF15Q8N660 670 aa19.08■□□□□ 0.64
VRK3-218ENST00000600031 SLC4A9Q96Q91 983 aa19.08■□□□□ 0.64
VRK3-218ENST00000600031 A1BGP04217 495 aa19.07■□□□□ 0.64
VRK3-218ENST00000600031 DNAJC10Q8IXB1 793 aa19.07■□□□□ 0.64
VRK3-218ENST00000600031 XAGE3Q8WTP9 111 aa19.07■□□□□ 0.64
VRK3-218ENST00000600031 KSR2Q6VAB6 950 aa19.07■□□□□ 0.64
VRK3-218ENST00000600031 COPS6Q7L5N1 327 aa19.07■□□□□ 0.64
VRK3-218ENST00000600031 RWDD1Q9H446 243 aaPredicted RBP19.07■□□□□ 0.64
VRK3-218ENST00000600031 MAP3K2Q9Y2U5 619 aa19.07■□□□□ 0.64
VRK3-218ENST00000600031 N4BP2Q86UW6 1770 aaPredicted RBP19.07■□□□□ 0.64
VRK3-218ENST00000600031 ERBB4Q15303 1308 aa19.06■□□□□ 0.64
VRK3-218ENST00000600031 HDAC1Q13547 482 aaPredicted RBP19.06■□□□□ 0.64
VRK3-218ENST00000600031 FAM182BQ5T319 152 aa19.06■□□□□ 0.64
VRK3-218ENST00000600031 BEND3Q5T5X7 828 aa19.06■□□□□ 0.64
VRK3-218ENST00000600031 SKAP1Q86WV1 359 aa19.06■□□□□ 0.64
VRK3-218ENST00000600031 SEPT12Q8IYM1 358 aa19.06■□□□□ 0.64
VRK3-218ENST00000600031 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
VRK3-218ENST00000600031 DDX58O95786 925 aaKnown RBP19.04■□□□□ 0.64
VRK3-218ENST00000600031 SRCIN1Q9C0H9 1055 aa19.04■□□□□ 0.64
VRK3-218ENST00000600031 SIRT2Q8IXJ6 389 aa19.03■□□□□ 0.64
VRK3-218ENST00000600031 DEKP35659 375 aaKnown RBP19.03■□□□□ 0.64
VRK3-218ENST00000600031 NBR1Q14596 966 aa19.03■□□□□ 0.64
VRK3-218ENST00000600031 PTF1AQ7RTS3 328 aa19.03■□□□□ 0.64
VRK3-218ENST00000600031 RIC3Q7Z5B4 369 aa19.03■□□□□ 0.64
VRK3-218ENST00000600031 USP44Q9H0E7 712 aa19.03■□□□□ 0.64
VRK3-218ENST00000600031 ATP10DQ9P241 1426 aa19.03■□□□□ 0.64
VRK3-218ENST00000600031 STARD3NLO95772 234 aa19.01■□□□□ 0.63
VRK3-218ENST00000600031 ANKRD13DQ6ZTN6 518 aa19.01■□□□□ 0.63
VRK3-218ENST00000600031 NPM2Q86SE8 214 aaKnown RBP19.01■□□□□ 0.63
VRK3-218ENST00000600031 CYP19A1P11511 503 aaPredicted RBP19.01■□□□□ 0.63
VRK3-218ENST00000600031 TJP1Q07157 1748 aa19■□□□□ 0.63
VRK3-218ENST00000600031 PALLDQ8WX93 1383 aa19■□□□□ 0.63
VRK3-218ENST00000600031 GNAI3P08754 354 aa19■□□□□ 0.63
VRK3-218ENST00000600031 RTL5Q5HYW3 569 aaPredicted RBP19■□□□□ 0.63
VRK3-218ENST00000600031 TTLL7Q6ZT98 887 aa19■□□□□ 0.63
VRK3-218ENST00000600031 FBXO41Q8TF61 875 aa19■□□□□ 0.63
VRK3-218ENST00000600031 LOC102724428A0A0B4J2F2 783 aa18.99■□□□□ 0.63
VRK3-218ENST00000600031 SIK1P57059 783 aa18.99■□□□□ 0.63
VRK3-218ENST00000600031 CWF19L2Q2TBE0 894 aaKnown RBP18.99■□□□□ 0.63
VRK3-218ENST00000600031 ZNF772Q68DY9 489 aaPredicted RBP18.99■□□□□ 0.63
VRK3-218ENST00000600031 CEP85Q6P2H3 762 aa18.99■□□□□ 0.63
VRK3-218ENST00000600031 GNAI2P04899 355 aa18.98■□□□□ 0.63
VRK3-218ENST00000600031 ANKRD44Q8N8A2 993 aa18.98■□□□□ 0.63
VRK3-218ENST00000600031 LINS1Q8NG48 757 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms