RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 HEG1Q9ULI3 1381 aa16.93■□□□□ 0.3
SH2D3A-208ENST00000599563 ZPR1O75312 459 aa16.93■□□□□ 0.3
SH2D3A-208ENST00000599563 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
SH2D3A-208ENST00000599563 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
SH2D3A-208ENST00000599563 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
SH2D3A-208ENST00000599563 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
SH2D3A-208ENST00000599563 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
SH2D3A-208ENST00000599563 ZNF496Q96IT1 587 aaPredicted RBP16.91■□□□□ 0.3
SH2D3A-208ENST00000599563 MAPK8IP3Q9UPT6 1336 aa16.91■□□□□ 0.3
SH2D3A-208ENST00000599563 COL15A1P39059 1388 aa16.9■□□□□ 0.3
SH2D3A-208ENST00000599563 A0A087WZG4 1122 aa16.9■□□□□ 0.3
SH2D3A-208ENST00000599563 TGFB2P61812 414 aa16.9■□□□□ 0.3
SH2D3A-208ENST00000599563 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
SH2D3A-208ENST00000599563 C10orf71Q711Q0 1435 aa16.89■□□□□ 0.29
SH2D3A-208ENST00000599563 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.29
SH2D3A-208ENST00000599563 NPM2Q86SE8 214 aaKnown RBP16.89■□□□□ 0.29
SH2D3A-208ENST00000599563 NARFQ9UHQ1 456 aa16.89■□□□□ 0.29
SH2D3A-208ENST00000599563 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
SH2D3A-208ENST00000599563 MCM10Q7L590 875 aa16.88■□□□□ 0.29
SH2D3A-208ENST00000599563 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
SH2D3A-208ENST00000599563 KIAA1551Q9HCM1 1747 aa16.87■□□□□ 0.29
SH2D3A-208ENST00000599563 TAF7Q15545 349 aaPredicted RBP16.87■□□□□ 0.29
SH2D3A-208ENST00000599563 NFE2L2Q16236 605 aa16.87■□□□□ 0.29
SH2D3A-208ENST00000599563 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
SH2D3A-208ENST00000599563 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
SH2D3A-208ENST00000599563 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
SH2D3A-208ENST00000599563 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
SH2D3A-208ENST00000599563 YBX3P16989 372 aaKnown RBP eCLIP16.86■□□□□ 0.29
SH2D3A-208ENST00000599563 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
SH2D3A-208ENST00000599563 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
SH2D3A-208ENST00000599563 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
SH2D3A-208ENST00000599563 FKBP8Q14318 412 aa16.86■□□□□ 0.29
SH2D3A-208ENST00000599563 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
SH2D3A-208ENST00000599563 KDM3BQ7LBC6 1761 aa16.85■□□□□ 0.29
SH2D3A-208ENST00000599563 BRCA1P38398 1863 aaKnown RBP16.85■□□□□ 0.29
SH2D3A-208ENST00000599563 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
SH2D3A-208ENST00000599563 SNRPA1P09661 255 aaKnown RBP16.85■□□□□ 0.29
SH2D3A-208ENST00000599563 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
SH2D3A-208ENST00000599563 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
SH2D3A-208ENST00000599563 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
SH2D3A-208ENST00000599563 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
SH2D3A-208ENST00000599563 TM4SF1P30408 202 aa16.84■□□□□ 0.29
SH2D3A-208ENST00000599563 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
SH2D3A-208ENST00000599563 NRXN2Q9P2S2 1712 aa16.83■□□□□ 0.28
SH2D3A-208ENST00000599563 ARFGEF1Q9Y6D6 1849 aa16.83■□□□□ 0.28
SH2D3A-208ENST00000599563 DDR1Q08345 913 aa16.82■□□□□ 0.28
SH2D3A-208ENST00000599563 LMOD3Q0VAK6 560 aa16.82■□□□□ 0.28
SH2D3A-208ENST00000599563 ZNF784Q8NCA9 323 aaPredicted RBP16.82■□□□□ 0.28
SH2D3A-208ENST00000599563 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
SH2D3A-208ENST00000599563 UTRNP46939 3433 aa16.82■□□□□ 0.28
SH2D3A-208ENST00000599563 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
SH2D3A-208ENST00000599563 KCNQ3O43525 872 aa16.81■□□□□ 0.28
SH2D3A-208ENST00000599563 NFIXQ14938 502 aa16.8■□□□□ 0.28
SH2D3A-208ENST00000599563 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
SH2D3A-208ENST00000599563 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
SH2D3A-208ENST00000599563 RGL2O15211 777 aa16.79■□□□□ 0.28
SH2D3A-208ENST00000599563 A1BGP04217 495 aa16.79■□□□□ 0.28
SH2D3A-208ENST00000599563 GOLGB1Q14789 3259 aaKnown RBP16.78■□□□□ 0.28
SH2D3A-208ENST00000599563 DPEP1P16444 411 aa16.78■□□□□ 0.28
SH2D3A-208ENST00000599563 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
SH2D3A-208ENST00000599563 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
SH2D3A-208ENST00000599563 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
SH2D3A-208ENST00000599563 PIM2Q9P1W9 311 aa16.78■□□□□ 0.28
SH2D3A-208ENST00000599563 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
SH2D3A-208ENST00000599563 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
SH2D3A-208ENST00000599563 SERPINB2P05120 415 aa16.77■□□□□ 0.28
SH2D3A-208ENST00000599563 RIPK4P57078 832 aa16.77■□□□□ 0.28
SH2D3A-208ENST00000599563 PDZRN3Q9UPQ7 1066 aa16.77■□□□□ 0.28
SH2D3A-208ENST00000599563 BCS1LQ9Y276 419 aa16.77■□□□□ 0.28
SH2D3A-208ENST00000599563 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.28
SH2D3A-208ENST00000599563 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
SH2D3A-208ENST00000599563 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
SH2D3A-208ENST00000599563 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
SH2D3A-208ENST00000599563 CLEC4GQ6UXB4 293 aa16.76■□□□□ 0.27
SH2D3A-208ENST00000599563 DZIP3Q86Y13 1208 aaKnown RBP16.76■□□□□ 0.27
SH2D3A-208ENST00000599563 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
SH2D3A-208ENST00000599563 APAF1O14727 1248 aa16.75■□□□□ 0.27
SH2D3A-208ENST00000599563 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
SH2D3A-208ENST00000599563 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
SH2D3A-208ENST00000599563 GIGYF1O75420 1035 aaPredicted RBP16.74■□□□□ 0.27
SH2D3A-208ENST00000599563 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
SH2D3A-208ENST00000599563 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
SH2D3A-208ENST00000599563 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
SH2D3A-208ENST00000599563 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
SH2D3A-208ENST00000599563 ERBB4Q15303 1308 aa16.73■□□□□ 0.27
SH2D3A-208ENST00000599563 KCNA3P22001 575 aa16.73■□□□□ 0.27
SH2D3A-208ENST00000599563 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
SH2D3A-208ENST00000599563 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
SH2D3A-208ENST00000599563 THUMPD2Q9BTF0 503 aaKnown RBP16.73■□□□□ 0.27
SH2D3A-208ENST00000599563 TSPYL4Q9UJ04 414 aa16.73■□□□□ 0.27
SH2D3A-208ENST00000599563 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
SH2D3A-208ENST00000599563 PRAMEF22A3QJZ6 481 aa16.72■□□□□ 0.27
SH2D3A-208ENST00000599563 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
SH2D3A-208ENST00000599563 ADCY9O60503 1353 aa16.72■□□□□ 0.27
SH2D3A-208ENST00000599563 ATP10DQ9P241 1426 aa16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 H0YIN7 160 aa16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 NPHP1O15259 732 aa16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 PDE6BP35913 854 aa16.71■□□□□ 0.27
SH2D3A-208ENST00000599563 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms