RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 GNAT3A8MTJ3 354 aa19.64■□□□□ 0.73
EBI3-202ENST00000599339 POLRMTO00411 1230 aaKnown RBP19.64■□□□□ 0.73
EBI3-202ENST00000599339 STARD3NLO95772 234 aa19.64■□□□□ 0.73
EBI3-202ENST00000599339 KCNA3P22001 575 aa19.64■□□□□ 0.73
EBI3-202ENST00000599339 DALRD3Q5D0E6 543 aaKnown RBP19.64■□□□□ 0.73
EBI3-202ENST00000599339 CFAP53Q96M91 514 aa19.64■□□□□ 0.73
EBI3-202ENST00000599339 ZBTB1Q9Y2K1 713 aa19.64■□□□□ 0.73
EBI3-202ENST00000599339 ARFGEF1Q9Y6D6 1849 aa19.63■□□□□ 0.73
EBI3-202ENST00000599339 KIF3CO14782 793 aa19.62■□□□□ 0.73
EBI3-202ENST00000599339 HSPA6P17066 643 aa19.62■□□□□ 0.73
EBI3-202ENST00000599339 UBR2Q8IWV8 1755 aa19.62■□□□□ 0.73
EBI3-202ENST00000599339 A0A087WZG4 1122 aa19.61■□□□□ 0.73
EBI3-202ENST00000599339 TEX13AQ9BXU3 409 aaPredicted RBP19.61■□□□□ 0.73
EBI3-202ENST00000599339 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
EBI3-202ENST00000599339 CHRNA5P30532 468 aa19.6■□□□□ 0.73
EBI3-202ENST00000599339 NFIXQ14938 502 aa19.6■□□□□ 0.73
EBI3-202ENST00000599339 NUDCQ9Y266 331 aa19.6■□□□□ 0.73
EBI3-202ENST00000599339 C9orf131Q5VYM1 1079 aa19.59■□□□□ 0.73
EBI3-202ENST00000599339 ZNF790Q6PG37 636 aa19.59■□□□□ 0.73
EBI3-202ENST00000599339 NPM2Q86SE8 214 aaKnown RBP19.58■□□□□ 0.72
EBI3-202ENST00000599339 IL17REQ8NFR9 667 aa19.58■□□□□ 0.72
EBI3-202ENST00000599339 HEG1Q9ULI3 1381 aa19.57■□□□□ 0.72
EBI3-202ENST00000599339 SERPINB2P05120 415 aa19.57■□□□□ 0.72
EBI3-202ENST00000599339 ZNF496Q96IT1 587 aaPredicted RBP19.57■□□□□ 0.72
EBI3-202ENST00000599339 CEP350Q5VT06 3117 aa19.57■□□□□ 0.72
EBI3-202ENST00000599339 TOMM70O94826 608 aa19.56■□□□□ 0.72
EBI3-202ENST00000599339 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
EBI3-202ENST00000599339 EIF5P55010 431 aaKnown RBP19.56■□□□□ 0.72
EBI3-202ENST00000599339 FMNL2Q96PY5 1086 aa19.56■□□□□ 0.72
EBI3-202ENST00000599339 BCL2L12Q9HB09 334 aa19.56■□□□□ 0.72
EBI3-202ENST00000599339 NRXN2Q9P2S2 1712 aa19.56■□□□□ 0.72
EBI3-202ENST00000599339 AFDNP55196 1824 aaKnown RBP19.55■□□□□ 0.72
EBI3-202ENST00000599339 RNF181Q9P0P0 153 aa19.55■□□□□ 0.72
EBI3-202ENST00000599339 CEMIPQ8WUJ3 1361 aa19.55■□□□□ 0.72
EBI3-202ENST00000599339 SIPA1L3O60292 1781 aaPredicted RBP19.55■□□□□ 0.72
EBI3-202ENST00000599339 KDM2BQ8NHM5 1336 aa19.54■□□□□ 0.72
EBI3-202ENST00000599339 RSPH6AQ9H0K4 717 aa19.54■□□□□ 0.72
EBI3-202ENST00000599339 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
EBI3-202ENST00000599339 U2AF1L5P0DN76 240 aaPredicted RBP19.53■□□□□ 0.72
EBI3-202ENST00000599339 IL6STP40189 918 aaPredicted RBP19.53■□□□□ 0.72
EBI3-202ENST00000599339 U2AF1Q01081 240 aaKnown RBP eCLIP19.53■□□□□ 0.72
EBI3-202ENST00000599339 BICDL1Q6ZP65 573 aa19.53■□□□□ 0.72
EBI3-202ENST00000599339 C16orf71Q8IYS4 520 aaPredicted RBP19.53■□□□□ 0.72
EBI3-202ENST00000599339 NMRK2Q9NPI5 230 aa19.53■□□□□ 0.72
EBI3-202ENST00000599339 ZNF330Q9Y3S2 320 aaPredicted RBP19.53■□□□□ 0.72
EBI3-202ENST00000599339 H0YIN7 160 aa19.52■□□□□ 0.72
EBI3-202ENST00000599339 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.72
EBI3-202ENST00000599339 TTLL6Q8N841 843 aa19.52■□□□□ 0.72
EBI3-202ENST00000599339 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
EBI3-202ENST00000599339 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
EBI3-202ENST00000599339 PDZRN3Q9UPQ7 1066 aa19.52■□□□□ 0.72
EBI3-202ENST00000599339 PPP2R1AP30153 589 aa19.51■□□□□ 0.71
EBI3-202ENST00000599339 APLP1P51693 650 aa19.51■□□□□ 0.71
EBI3-202ENST00000599339 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
EBI3-202ENST00000599339 DLEC1Q9Y238 1755 aa19.5■□□□□ 0.71
EBI3-202ENST00000599339 SCN7AQ01118 1682 aa19.5■□□□□ 0.71
EBI3-202ENST00000599339 TBC1D2BQ9UPU7 963 aa19.5■□□□□ 0.71
EBI3-202ENST00000599339 CARMIL3Q8ND23 1372 aa19.49■□□□□ 0.71
EBI3-202ENST00000599339 TBC1D9BQ66K14 1250 aa19.49■□□□□ 0.71
EBI3-202ENST00000599339 RBM46Q8TBY0 533 aaKnown RBP19.49■□□□□ 0.71
EBI3-202ENST00000599339 SBF1O95248 1867 aa19.48■□□□□ 0.71
EBI3-202ENST00000599339 A1BGP04217 495 aa19.48■□□□□ 0.71
EBI3-202ENST00000599339 PDE6BP35913 854 aa19.48■□□□□ 0.71
EBI3-202ENST00000599339 NPHP1O15259 732 aa19.47■□□□□ 0.71
EBI3-202ENST00000599339 LMNB1P20700 586 aa19.47■□□□□ 0.71
EBI3-202ENST00000599339 SETDB2Q96T68 719 aa19.47■□□□□ 0.71
EBI3-202ENST00000599339 BRIP1Q9BX63 1249 aa19.47■□□□□ 0.71
EBI3-202ENST00000599339 KCNQ3O43525 872 aa19.46■□□□□ 0.71
EBI3-202ENST00000599339 HTATSF1O43719 755 aaKnown RBP19.46■□□□□ 0.71
EBI3-202ENST00000599339 NEFMP07197 916 aa19.46■□□□□ 0.71
EBI3-202ENST00000599339 RASSF7Q02833 373 aa19.46■□□□□ 0.71
EBI3-202ENST00000599339 TNRC6CQ9HCJ0 1690 aaKnown RBP19.46■□□□□ 0.71
EBI3-202ENST00000599339 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
EBI3-202ENST00000599339 PRR5LQ6MZQ0 368 aa19.45■□□□□ 0.7
EBI3-202ENST00000599339 DZIP3Q86Y13 1208 aaKnown RBP19.45■□□□□ 0.7
EBI3-202ENST00000599339 ZNF622Q969S3 477 aaKnown RBP eCLIP19.45■□□□□ 0.7
EBI3-202ENST00000599339 CAMTA2O94983 1202 aa19.44■□□□□ 0.7
EBI3-202ENST00000599339 ST5P78524 1137 aa19.44■□□□□ 0.7
EBI3-202ENST00000599339 FSTL1Q12841 308 aa19.44■□□□□ 0.7
EBI3-202ENST00000599339 MCM10Q7L590 875 aa19.44■□□□□ 0.7
EBI3-202ENST00000599339 CNBD1Q8NA66 436 aa19.44■□□□□ 0.7
EBI3-202ENST00000599339 RRAGCQ9HB90 399 aa19.43■□□□□ 0.7
EBI3-202ENST00000599339 ZNF652Q9Y2D9 606 aa19.43■□□□□ 0.7
EBI3-202ENST00000599339 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
EBI3-202ENST00000599339 ANKRD31Q8N7Z5 1873 aa19.42■□□□□ 0.7
EBI3-202ENST00000599339 CLEC4GQ6UXB4 293 aa19.42■□□□□ 0.7
EBI3-202ENST00000599339 BCORQ6W2J9 1755 aa19.42■□□□□ 0.7
EBI3-202ENST00000599339 GLTPD2A6NH11 291 aa19.4■□□□□ 0.7
EBI3-202ENST00000599339 DCTN1Q14203 1278 aa19.4■□□□□ 0.7
EBI3-202ENST00000599339 TAF7Q15545 349 aaPredicted RBP19.4■□□□□ 0.7
EBI3-202ENST00000599339 CCDC24Q8N4L8 307 aa19.4■□□□□ 0.7
EBI3-202ENST00000599339 CNKSR1Q969H4 720 aa19.4■□□□□ 0.7
EBI3-202ENST00000599339 NFKBIEO00221 500 aa19.39■□□□□ 0.69
EBI3-202ENST00000599339 RGL2O15211 777 aa19.39■□□□□ 0.69
EBI3-202ENST00000599339 C21orf2O43822 256 aa19.39■□□□□ 0.69
EBI3-202ENST00000599339 PIP4K2AP48426 406 aaPredicted RBP19.39■□□□□ 0.69
EBI3-202ENST00000599339 SMC1BQ8NDV3 1235 aa19.39■□□□□ 0.69
EBI3-202ENST00000599339 PRAMEF22A3QJZ6 481 aa19.38■□□□□ 0.69
EBI3-202ENST00000599339 COL11A2P13942 1736 aaPredicted RBP19.38■□□□□ 0.69
EBI3-202ENST00000599339 VEGFAP15692 232 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms