RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
ZNF544-213ENST00000599227 MAP2P11137 1827 aaKnown RBP13.54□□□□□ -0.24
ZNF544-213ENST00000599227 NPHP1O15259 732 aa13.54□□□□□ -0.24
ZNF544-213ENST00000599227 MYO5BQ9ULV0 1848 aa13.54□□□□□ -0.24
ZNF544-213ENST00000599227 ALKQ9UM73 1620 aa13.54□□□□□ -0.24
ZNF544-213ENST00000599227 GNAI3P08754 354 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 ATF3P18847 181 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 CPS1P31327 1500 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 CWC22Q9HCG8 908 aaKnown RBP13.53□□□□□ -0.24
ZNF544-213ENST00000599227 TOMM22Q9NS69 142 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 PTPRCP08575 1304 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 CHMLP26374 656 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 AACSQ86V21 672 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 TNRQ92752 1358 aa13.53□□□□□ -0.24
ZNF544-213ENST00000599227 GOLGA6L4A6NEF3 574 aa13.52□□□□□ -0.24
ZNF544-213ENST00000599227 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.24
ZNF544-213ENST00000599227 NBPF6Q5VWK0 638 aa13.52□□□□□ -0.24
ZNF544-213ENST00000599227 C17orf53Q8N3J3 647 aaPredicted RBP13.52□□□□□ -0.24
ZNF544-213ENST00000599227 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.24
ZNF544-213ENST00000599227 NBPF4Q96M43 638 aa13.52□□□□□ -0.24
ZNF544-213ENST00000599227 LRRC2Q9BYS8 371 aa13.52□□□□□ -0.24
ZNF544-213ENST00000599227 G3BP1Q13283 466 aaKnown RBP eCLIP13.52□□□□□ -0.25
ZNF544-213ENST00000599227 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
ZNF544-213ENST00000599227 SNRKQ9NRH2 765 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 USP25Q9UHP3 1055 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 CNPY2Q9Y2B0 182 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 ROBO2Q9HCK4 1378 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 HSP90AB3PQ58FF7 597 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
ZNF544-213ENST00000599227 NCOA3Q9Y6Q9 1424 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 TOM1L2Q6ZVM7 507 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 TSC1Q92574 1164 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 FSD1Q9BTV5 496 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 PIK3R4Q99570 1358 aa13.51□□□□□ -0.25
ZNF544-213ENST00000599227 NUTM2BA6NNL0 878 aaPredicted RBP13.5□□□□□ -0.25
ZNF544-213ENST00000599227 NUTM2EB1AL46 878 aaPredicted RBP13.5□□□□□ -0.25
ZNF544-213ENST00000599227 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 NUTM2AQ8IVF1 878 aaPredicted RBP13.5□□□□□ -0.25
ZNF544-213ENST00000599227 MAP3K2Q9Y2U5 619 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 SPC24Q8NBT2 197 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 MYD88Q99836 296 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 MED14O60244 1454 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 CASTP20810 708 aaKnown RBP13.5□□□□□ -0.25
ZNF544-213ENST00000599227 NECAB1Q8N987 351 aa13.5□□□□□ -0.25
ZNF544-213ENST00000599227 FAM173BQ6P4H8 233 aa13.49□□□□□ -0.25
ZNF544-213ENST00000599227 CLASRPQ8N2M8 674 aaKnown RBP13.49□□□□□ -0.25
ZNF544-213ENST00000599227 TSPY26PQ9H489 355 aa13.49□□□□□ -0.25
ZNF544-213ENST00000599227 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
ZNF544-213ENST00000599227 ATP10DQ9P241 1426 aa13.49□□□□□ -0.25
ZNF544-213ENST00000599227 ATP8B2P98198 1209 aa13.49□□□□□ -0.25
ZNF544-213ENST00000599227 USP44Q9H0E7 712 aa13.49□□□□□ -0.25
ZNF544-213ENST00000599227 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
ZNF544-213ENST00000599227 HCLS1P14317 486 aaPredicted RBP13.48□□□□□ -0.25
ZNF544-213ENST00000599227 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
ZNF544-213ENST00000599227 MTMR7Q9Y216 660 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 GPTP24298 496 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 PROSER3Q2NL68 480 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 DIP2CQ9Y2E4 1556 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 UQCRHLA0A096LP55 91 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 UQCRHP07919 91 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 LRSAM1Q6UWE0 723 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 ANKRD24Q8TF21 1146 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 JAKMIP1Q96N16 626 aaKnown RBP13.48□□□□□ -0.25
ZNF544-213ENST00000599227 PRDM11Q9NQV5 511 aa13.48□□□□□ -0.25
ZNF544-213ENST00000599227 DRC7Q8IY82 874 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 TTC12Q9H892 705 aaPredicted RBP13.47□□□□□ -0.25
ZNF544-213ENST00000599227 GUCY1B3Q02153 619 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 CAMK4Q16566 473 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 PLEKHO1Q53GL0 409 aaPredicted RBP13.47□□□□□ -0.25
ZNF544-213ENST00000599227 GIMAP6Q6P9H5 292 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 HOXC9P31274 260 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
ZNF544-213ENST00000599227 APPP05067 770 aa13.46□□□□□ -0.25
ZNF544-213ENST00000599227 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.46□□□□□ -0.25
ZNF544-213ENST00000599227 CFAP74Q9C0B2 1584 aa13.46□□□□□ -0.25
ZNF544-213ENST00000599227 ZNF445P59923 1031 aa13.46□□□□□ -0.25
ZNF544-213ENST00000599227 SYAP1Q96A49 352 aaPredicted RBP13.46□□□□□ -0.25
ZNF544-213ENST00000599227 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.26
ZNF544-213ENST00000599227 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.26
ZNF544-213ENST00000599227 AK2P54819 239 aa13.46□□□□□ -0.26
ZNF544-213ENST00000599227 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
ZNF544-213ENST00000599227 CHST3Q7LGC8 479 aa13.45□□□□□ -0.26
ZNF544-213ENST00000599227 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
ZNF544-213ENST00000599227 MBD3O95983 291 aa13.45□□□□□ -0.26
ZNF544-213ENST00000599227 TFIP11Q9UBB9 837 aaKnown RBP13.45□□□□□ -0.26
ZNF544-213ENST00000599227 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
ZNF544-213ENST00000599227 CYP2E1P05181 493 aaPredicted RBP13.45□□□□□ -0.26
ZNF544-213ENST00000599227 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
ZNF544-213ENST00000599227 CNTROBQ8N137 903 aa13.45□□□□□ -0.26
ZNF544-213ENST00000599227 DNAAF4Q8WXU2 420 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms