RNA–Protein interactions for RNA: ENST00000599220.1

TMEM143-210, Transcript of transmembrane protein 143, humanhuman

TSL 3

Gene TMEM143, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-210ENST00000599220 C9orf131Q5VYM1 1079 aa22.2■■□□□ 1.14
TMEM143-210ENST00000599220 NARFQ9UHQ1 456 aa22.19■■□□□ 1.14
TMEM143-210ENST00000599220 COL15A1P39059 1388 aa22.19■■□□□ 1.14
TMEM143-210ENST00000599220 CANXP27824 592 aaKnown RBP22.18■■□□□ 1.14
TMEM143-210ENST00000599220 NFIXQ14938 502 aa22.18■■□□□ 1.14
TMEM143-210ENST00000599220 VSIG10Q8N0Z9 540 aa22.18■■□□□ 1.14
TMEM143-210ENST00000599220 TTC5Q8N0Z6 440 aa22.17■■□□□ 1.14
TMEM143-210ENST00000599220 NMRK2Q9NPI5 230 aa22.17■■□□□ 1.14
TMEM143-210ENST00000599220 ARFGEF1Q9Y6D6 1849 aa22.17■■□□□ 1.14
TMEM143-210ENST00000599220 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
TMEM143-210ENST00000599220 NPC1L1Q9UHC9 1359 aa22.15■■□□□ 1.14
TMEM143-210ENST00000599220 TEFQ10587 303 aa22.15■■□□□ 1.14
TMEM143-210ENST00000599220 IL17REQ8NFR9 667 aa22.15■■□□□ 1.14
TMEM143-210ENST00000599220 GAS2L2Q8NHY3 880 aa22.15■■□□□ 1.14
TMEM143-210ENST00000599220 BCL2L12Q9HB09 334 aa22.15■■□□□ 1.14
TMEM143-210ENST00000599220 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
TMEM143-210ENST00000599220 TOMM70O94826 608 aa22.14■■□□□ 1.13
TMEM143-210ENST00000599220 STARD3NLO95772 234 aa22.14■■□□□ 1.13
TMEM143-210ENST00000599220 SERPINB2P05120 415 aa22.13■■□□□ 1.13
TMEM143-210ENST00000599220 ZNF496Q96IT1 587 aaPredicted RBP22.13■■□□□ 1.13
TMEM143-210ENST00000599220 RNF181Q9P0P0 153 aa22.13■■□□□ 1.13
TMEM143-210ENST00000599220 ZNF790Q6PG37 636 aa22.12■■□□□ 1.13
TMEM143-210ENST00000599220 BICDL1Q6ZP65 573 aa22.12■■□□□ 1.13
TMEM143-210ENST00000599220 UBR2Q8IWV8 1755 aa22.12■■□□□ 1.13
TMEM143-210ENST00000599220 AFDNP55196 1824 aaKnown RBP22.11■■□□□ 1.13
TMEM143-210ENST00000599220 ZNF330Q9Y3S2 320 aaPredicted RBP22.11■■□□□ 1.13
TMEM143-210ENST00000599220 EIF5P55010 431 aaKnown RBP22.1■■□□□ 1.13
TMEM143-210ENST00000599220 HEG1Q9ULI3 1381 aa22.1■■□□□ 1.13
TMEM143-210ENST00000599220 A0A087WZG4 1122 aa22.09■■□□□ 1.13
TMEM143-210ENST00000599220 PRKAR2BP31323 418 aa22.08■■□□□ 1.13
TMEM143-210ENST00000599220 APLP1P51693 650 aa22.08■■□□□ 1.13
TMEM143-210ENST00000599220 RASSF7Q02833 373 aa22.08■■□□□ 1.13
TMEM143-210ENST00000599220 C2CD5Q86YS7 1000 aa22.08■■□□□ 1.13
TMEM143-210ENST00000599220 C16orf71Q8IYS4 520 aaPredicted RBP22.08■■□□□ 1.13
TMEM143-210ENST00000599220 PHACTR3Q96KR7 559 aa22.08■■□□□ 1.13
TMEM143-210ENST00000599220 CFAP53Q96M91 514 aa22.08■■□□□ 1.13
TMEM143-210ENST00000599220 TEX13AQ9BXU3 409 aaPredicted RBP22.08■■□□□ 1.13
TMEM143-210ENST00000599220 NRXN2Q9P2S2 1712 aa22.07■■□□□ 1.12
TMEM143-210ENST00000599220 TBC1D2BQ9UPU7 963 aa22.07■■□□□ 1.12
TMEM143-210ENST00000599220 KDM2BQ8NHM5 1336 aa22.06■■□□□ 1.12
TMEM143-210ENST00000599220 TBC1D9BQ66K14 1250 aa22.06■■□□□ 1.12
TMEM143-210ENST00000599220 TTLL6Q8N841 843 aa22.06■■□□□ 1.12
TMEM143-210ENST00000599220 FMNL2Q96PY5 1086 aa22.06■■□□□ 1.12
TMEM143-210ENST00000599220 RSPH6AQ9H0K4 717 aa22.06■■□□□ 1.12
TMEM143-210ENST00000599220 CARMIL3Q8ND23 1372 aa22.06■■□□□ 1.12
TMEM143-210ENST00000599220 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
TMEM143-210ENST00000599220 H0YIN7 160 aa22.05■■□□□ 1.12
TMEM143-210ENST00000599220 KCNQ3O43525 872 aa22.05■■□□□ 1.12
TMEM143-210ENST00000599220 A1BGP04217 495 aa22.05■■□□□ 1.12
TMEM143-210ENST00000599220 RRAGCQ9HB90 399 aa22.05■■□□□ 1.12
TMEM143-210ENST00000599220 SBF1O95248 1867 aa22.05■■□□□ 1.12
TMEM143-210ENST00000599220 RBM46Q8TBY0 533 aaKnown RBP22.04■■□□□ 1.12
TMEM143-210ENST00000599220 SIPA1L3O60292 1781 aaPredicted RBP22.04■■□□□ 1.12
TMEM143-210ENST00000599220 CEMIPQ8WUJ3 1361 aa22.03■■□□□ 1.12
TMEM143-210ENST00000599220 IL6STP40189 918 aaPredicted RBP22.03■■□□□ 1.12
TMEM143-210ENST00000599220 NPM2Q86SE8 214 aaKnown RBP22.03■■□□□ 1.12
TMEM143-210ENST00000599220 CCDC24Q8N4L8 307 aa22.03■■□□□ 1.12
TMEM143-210ENST00000599220 NUDCQ9Y266 331 aa22.03■■□□□ 1.12
TMEM143-210ENST00000599220 U2AF1L5P0DN76 240 aaPredicted RBP22.02■■□□□ 1.12
TMEM143-210ENST00000599220 U2AF1Q01081 240 aaKnown RBP eCLIP22.02■■□□□ 1.12
TMEM143-210ENST00000599220 IFFO2Q5TF58 517 aa22.02■■□□□ 1.12
TMEM143-210ENST00000599220 ZNF622Q969S3 477 aaKnown RBP eCLIP22.02■■□□□ 1.12
TMEM143-210ENST00000599220 LMNB1P20700 586 aa22.01■■□□□ 1.11
TMEM143-210ENST00000599220 DLEC1Q9Y238 1755 aa22■■□□□ 1.11
TMEM143-210ENST00000599220 PPP2R1AP30153 589 aa22■■□□□ 1.11
TMEM143-210ENST00000599220 PRELPP51888 382 aa22■■□□□ 1.11
TMEM143-210ENST00000599220 PIP4K2AP48426 406 aaPredicted RBP21.99■■□□□ 1.11
TMEM143-210ENST00000599220 PRR5LQ6MZQ0 368 aa21.99■■□□□ 1.11
TMEM143-210ENST00000599220 MCM10Q7L590 875 aa21.99■■□□□ 1.11
TMEM143-210ENST00000599220 DNAJC5GQ8N7S2 189 aa21.99■■□□□ 1.11
TMEM143-210ENST00000599220 RTF1Q92541 710 aaKnown RBP21.99■■□□□ 1.11
TMEM143-210ENST00000599220 BRIP1Q9BX63 1249 aa21.99■■□□□ 1.11
TMEM143-210ENST00000599220 ZNF219Q9P2Y4 722 aaPredicted RBP21.99■■□□□ 1.11
TMEM143-210ENST00000599220 USP16Q9Y5T5 823 aa21.99■■□□□ 1.11
TMEM143-210ENST00000599220 SCN7AQ01118 1682 aa21.98■■□□□ 1.11
TMEM143-210ENST00000599220 NPHP1O15259 732 aa21.98■■□□□ 1.11
TMEM143-210ENST00000599220 CAMTA2O94983 1202 aa21.98■■□□□ 1.11
TMEM143-210ENST00000599220 PDE6BP35913 854 aa21.98■■□□□ 1.11
TMEM143-210ENST00000599220 FSTL1Q12841 308 aa21.98■■□□□ 1.11
TMEM143-210ENST00000599220 SETDB2Q96T68 719 aa21.98■■□□□ 1.11
TMEM143-210ENST00000599220 PRAMEF22A3QJZ6 481 aa21.97■■□□□ 1.11
TMEM143-210ENST00000599220 NFKBIEO00221 500 aa21.97■■□□□ 1.11
TMEM143-210ENST00000599220 HTRA3P83110 453 aa21.97■■□□□ 1.11
TMEM143-210ENST00000599220 DZIP3Q86Y13 1208 aaKnown RBP21.97■■□□□ 1.11
TMEM143-210ENST00000599220 ZC3H4Q9UPT8 1303 aaKnown RBP21.97■■□□□ 1.11
TMEM143-210ENST00000599220 ANKRD31Q8N7Z5 1873 aa21.96■■□□□ 1.11
TMEM143-210ENST00000599220 DCTN1Q14203 1278 aa21.96■■□□□ 1.11
TMEM143-210ENST00000599220 PDZRN3Q9UPQ7 1066 aa21.96■■□□□ 1.11
TMEM143-210ENST00000599220 TNRC6CQ9HCJ0 1690 aaKnown RBP21.95■■□□□ 1.1
TMEM143-210ENST00000599220 GLTPD2A6NH11 291 aa21.95■■□□□ 1.1
TMEM143-210ENST00000599220 C21orf2O43822 256 aa21.95■■□□□ 1.1
TMEM143-210ENST00000599220 CNBD1Q8NA66 436 aa21.95■■□□□ 1.1
TMEM143-210ENST00000599220 CCDC88AQ3V6T2 1871 aa21.94■■□□□ 1.1
TMEM143-210ENST00000599220 SNRPA1P09661 255 aaKnown RBP21.93■■□□□ 1.1
TMEM143-210ENST00000599220 ST5P78524 1137 aa21.93■■□□□ 1.1
TMEM143-210ENST00000599220 WDR90Q96KV7 1748 aa21.92■■□□□ 1.1
TMEM143-210ENST00000599220 VEGFAP15692 232 aaPredicted RBP21.92■■□□□ 1.1
TMEM143-210ENST00000599220 SMC1BQ8NDV3 1235 aa21.92■■□□□ 1.1
TMEM143-210ENST00000599220 COL11A2P13942 1736 aaPredicted RBP21.91■■□□□ 1.1
TMEM143-210ENST00000599220 CNKSR1Q969H4 720 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms