RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 NUDCQ9Y266 331 aa30.68■■■□□ 2.5
CCDC61-207ENST00000599044 SENP3-EIF4A1A0A087X0R7 540 aa30.67■■■□□ 2.5
CCDC61-207ENST00000599044 TM4SF1P30408 202 aa30.67■■■□□ 2.5
CCDC61-207ENST00000599044 ZNF790Q6PG37 636 aa30.67■■■□□ 2.5
CCDC61-207ENST00000599044 TTC5Q8N0Z6 440 aa30.67■■■□□ 2.5
CCDC61-207ENST00000599044 CEMIPQ8WUJ3 1361 aa30.66■■■□□ 2.5
CCDC61-207ENST00000599044 KCNQ3O43525 872 aa30.65■■■□□ 2.5
CCDC61-207ENST00000599044 ZPR1O75312 459 aa30.65■■■□□ 2.5
CCDC61-207ENST00000599044 KCNA3P22001 575 aa30.65■■■□□ 2.5
CCDC61-207ENST00000599044 CANXP27824 592 aaKnown RBP30.65■■■□□ 2.5
CCDC61-207ENST00000599044 SIPA1L3O60292 1781 aaPredicted RBP30.64■■■□□ 2.5
CCDC61-207ENST00000599044 POLRMTO00411 1230 aaKnown RBP30.64■■■□□ 2.5
CCDC61-207ENST00000599044 BCL2L12Q9HB09 334 aa30.64■■■□□ 2.5
CCDC61-207ENST00000599044 COL15A1P39059 1388 aa30.64■■■□□ 2.5
CCDC61-207ENST00000599044 NARFQ9UHQ1 456 aa30.63■■■□□ 2.49
CCDC61-207ENST00000599044 BCS1LQ9Y276 419 aa30.63■■■□□ 2.49
CCDC61-207ENST00000599044 HEG1Q9ULI3 1381 aa30.62■■■□□ 2.49
CCDC61-207ENST00000599044 FCHSD2O94868 740 aa30.61■■■□□ 2.49
CCDC61-207ENST00000599044 MCM10Q7L590 875 aa30.6■■■□□ 2.49
CCDC61-207ENST00000599044 STARD3NLO95772 234 aa30.59■■■□□ 2.49
CCDC61-207ENST00000599044 EIF5P55010 431 aaKnown RBP30.59■■■□□ 2.49
CCDC61-207ENST00000599044 NFIXQ14938 502 aa30.59■■■□□ 2.49
CCDC61-207ENST00000599044 BTBD11A6QL63 1104 aa30.58■■■□□ 2.49
CCDC61-207ENST00000599044 DCTN1Q14203 1278 aa30.58■■■□□ 2.49
CCDC61-207ENST00000599044 ARFGEF1Q9Y6D6 1849 aa30.57■■■□□ 2.48
CCDC61-207ENST00000599044 CEP350Q5VT06 3117 aa30.57■■■□□ 2.48
CCDC61-207ENST00000599044 CHRNA5P30532 468 aa30.56■■■□□ 2.48
CCDC61-207ENST00000599044 ZNF526Q8TF50 670 aaPredicted RBP30.56■■■□□ 2.48
CCDC61-207ENST00000599044 FMNL2Q96PY5 1086 aa30.56■■■□□ 2.48
CCDC61-207ENST00000599044 A1BGP04217 495 aa30.55■■■□□ 2.48
CCDC61-207ENST00000599044 PRAMEF22A3QJZ6 481 aa30.53■■■□□ 2.48
CCDC61-207ENST00000599044 ARHGAP27Q6ZUM4 889 aa30.53■■■□□ 2.48
CCDC61-207ENST00000599044 TEX13AQ9BXU3 409 aaPredicted RBP30.53■■■□□ 2.48
CCDC61-207ENST00000599044 RTF1Q92541 710 aaKnown RBP30.52■■■□□ 2.48
CCDC61-207ENST00000599044 PIM2Q9P1W9 311 aa30.52■■■□□ 2.48
CCDC61-207ENST00000599044 GPBP1L1Q9HC44 474 aaPredicted RBP30.51■■■□□ 2.47
CCDC61-207ENST00000599044 ZNF330Q9Y3S2 320 aaPredicted RBP30.51■■■□□ 2.47
CCDC61-207ENST00000599044 USP16Q9Y5T5 823 aa30.51■■■□□ 2.47
CCDC61-207ENST00000599044 SERPINB2P05120 415 aa30.5■■■□□ 2.47
CCDC61-207ENST00000599044 TBC1D2BQ9UPU7 963 aa30.5■■■□□ 2.47
CCDC61-207ENST00000599044 BICDL1Q6ZP65 573 aa30.49■■■□□ 2.47
CCDC61-207ENST00000599044 PIP4K2AP48426 406 aaPredicted RBP30.48■■■□□ 2.47
CCDC61-207ENST00000599044 PLEKHF1Q96S99 279 aa30.48■■■□□ 2.47
CCDC61-207ENST00000599044 AFDNP55196 1824 aaKnown RBP30.47■■■□□ 2.47
CCDC61-207ENST00000599044 A0A087WZG4 1122 aa30.47■■■□□ 2.47
CCDC61-207ENST00000599044 HTATSF1O43719 755 aaKnown RBP30.47■■■□□ 2.47
CCDC61-207ENST00000599044 IL6STP40189 918 aaPredicted RBP30.47■■■□□ 2.47
CCDC61-207ENST00000599044 DALRD3Q5D0E6 543 aaKnown RBP30.47■■■□□ 2.47
CCDC61-207ENST00000599044 TBC1D9BQ66K14 1250 aa30.47■■■□□ 2.47
CCDC61-207ENST00000599044 NRXN2Q9P2S2 1712 aa30.47■■■□□ 2.47
CCDC61-207ENST00000599044 MIS18AQ9NYP9 233 aa30.46■■■□□ 2.47
CCDC61-207ENST00000599044 CARMIL3Q8ND23 1372 aa30.45■■■□□ 2.47
CCDC61-207ENST00000599044 ZEB1P37275 1124 aaPredicted RBP30.44■■■□□ 2.46
CCDC61-207ENST00000599044 CAMTA2O94983 1202 aa30.42■■■□□ 2.46
CCDC61-207ENST00000599044 SNRPA1P09661 255 aaKnown RBP30.41■■■□□ 2.46
CCDC61-207ENST00000599044 TAF7Q15545 349 aaPredicted RBP30.41■■■□□ 2.46
CCDC61-207ENST00000599044 CCDC24Q8N4L8 307 aa30.41■■■□□ 2.46
CCDC61-207ENST00000599044 DDX10Q13206 875 aaKnown RBP30.4■■■□□ 2.46
CCDC61-207ENST00000599044 SBF1O95248 1867 aa30.4■■■□□ 2.46
CCDC61-207ENST00000599044 SCN7AQ01118 1682 aa30.39■■■□□ 2.46
CCDC61-207ENST00000599044 THUMPD2Q9BTF0 503 aaKnown RBP30.39■■■□□ 2.46
CCDC61-207ENST00000599044 DLEC1Q9Y238 1755 aa30.38■■■□□ 2.45
CCDC61-207ENST00000599044 C9orf131Q5VYM1 1079 aa30.38■■■□□ 2.45
CCDC61-207ENST00000599044 DZIP3Q86Y13 1208 aaKnown RBP30.38■■■□□ 2.45
CCDC61-207ENST00000599044 NBPF26B4DH59 902 aa30.37■■■□□ 2.45
CCDC61-207ENST00000599044 NFE2L2Q16236 605 aa30.37■■■□□ 2.45
CCDC61-207ENST00000599044 NBPF10Q6P3W6 841 aaKnown RBP30.37■■■□□ 2.45
CCDC61-207ENST00000599044 C2CD5Q86YS7 1000 aa30.37■■■□□ 2.45
CCDC61-207ENST00000599044 NBPF15Q8N660 670 aa30.37■■■□□ 2.45
CCDC61-207ENST00000599044 KIF3CO14782 793 aa30.36■■■□□ 2.45
CCDC61-207ENST00000599044 NEFMP07197 916 aa30.35■■■□□ 2.45
CCDC61-207ENST00000599044 PRR5LQ6MZQ0 368 aa30.35■■■□□ 2.45
CCDC61-207ENST00000599044 DLG5Q8TDM6 1919 aa30.35■■■□□ 2.45
CCDC61-207ENST00000599044 RALBP1Q15311 655 aa30.34■■■□□ 2.45
CCDC61-207ENST00000599044 NPM2Q86SE8 214 aaKnown RBP30.33■■■□□ 2.45
CCDC61-207ENST00000599044 H0YIN7 160 aa30.32■■■□□ 2.44
CCDC61-207ENST00000599044 SETDB2Q96T68 719 aa30.32■■■□□ 2.44
CCDC61-207ENST00000599044 TTLL6Q8N841 843 aa30.31■■■□□ 2.44
CCDC61-207ENST00000599044 BRIP1Q9BX63 1249 aa30.31■■■□□ 2.44
CCDC61-207ENST00000599044 ANKRD31Q8N7Z5 1873 aa30.31■■■□□ 2.44
CCDC61-207ENST00000599044 HSPA6P17066 643 aa30.3■■■□□ 2.44
CCDC61-207ENST00000599044 RASSF7Q02833 373 aa30.3■■■□□ 2.44
CCDC61-207ENST00000599044 RNF181Q9P0P0 153 aa30.3■■■□□ 2.44
CCDC61-207ENST00000599044 BCORQ6W2J9 1755 aa30.3■■■□□ 2.44
CCDC61-207ENST00000599044 PRELPP51888 382 aa30.29■■■□□ 2.44
CCDC61-207ENST00000599044 NMRK2Q9NPI5 230 aa30.29■■■□□ 2.44
CCDC61-207ENST00000599044 MAPK8IP3Q9UPT6 1336 aa30.28■■■□□ 2.44
CCDC61-207ENST00000599044 EIF4A1P60842 406 aaKnown RBP30.28■■■□□ 2.44
CCDC61-207ENST00000599044 PNISRQ8TF01 805 aaKnown RBP30.27■■■□□ 2.44
CCDC61-207ENST00000599044 PNNQ9H307 717 aaKnown RBP30.27■■■□□ 2.44
CCDC61-207ENST00000599044 KDM3BQ7LBC6 1761 aa30.26■■■□□ 2.44
CCDC61-207ENST00000599044 PDE6BP35913 854 aa30.26■■■□□ 2.43
CCDC61-207ENST00000599044 CCDC88AQ3V6T2 1871 aa30.26■■■□□ 2.43
CCDC61-207ENST00000599044 CNBD1Q8NA66 436 aa30.26■■■□□ 2.43
CCDC61-207ENST00000599044 ZNF622Q969S3 477 aaKnown RBP eCLIP30.26■■■□□ 2.43
CCDC61-207ENST00000599044 CLEC4GQ6UXB4 293 aa30.25■■■□□ 2.43
CCDC61-207ENST00000599044 HLFQ16534 295 aa30.24■■■□□ 2.43
CCDC61-207ENST00000599044 COL11A2P13942 1736 aaPredicted RBP30.24■■■□□ 2.43
CCDC61-207ENST00000599044 MYBBP1AQ9BQG0 1328 aaKnown RBP30.23■■■□□ 2.43
CCDC61-207ENST00000599044 ZNF219Q9P2Y4 722 aaPredicted RBP30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms