RNA–Protein interactions for RNA: ENST00000598775.1

SPTBN4-213, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-213ENST00000598775 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
SPTBN4-213ENST00000598775 TEX13AQ9BXU3 409 aaPredicted RBP20.47■□□□□ 0.87
SPTBN4-213ENST00000598775 GPBP1L1Q9HC44 474 aaPredicted RBP20.47■□□□□ 0.87
SPTBN4-213ENST00000598775 WWC3Q9ULE0 1092 aa20.47■□□□□ 0.87
SPTBN4-213ENST00000598775 ARFGEF1Q9Y6D6 1849 aa20.47■□□□□ 0.87
SPTBN4-213ENST00000598775 STARD3NLO95772 234 aa20.46■□□□□ 0.87
SPTBN4-213ENST00000598775 USPL1Q5W0Q7 1092 aa20.46■□□□□ 0.87
SPTBN4-213ENST00000598775 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
SPTBN4-213ENST00000598775 BCS1LQ9Y276 419 aa20.46■□□□□ 0.87
SPTBN4-213ENST00000598775 NRXN2Q9P2S2 1712 aa20.45■□□□□ 0.86
SPTBN4-213ENST00000598775 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
SPTBN4-213ENST00000598775 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
SPTBN4-213ENST00000598775 PIM2Q9P1W9 311 aa20.45■□□□□ 0.86
SPTBN4-213ENST00000598775 HEG1Q9ULI3 1381 aa20.45■□□□□ 0.86
SPTBN4-213ENST00000598775 CEP350Q5VT06 3117 aa20.44■□□□□ 0.86
SPTBN4-213ENST00000598775 EIF5P55010 431 aaKnown RBP20.44■□□□□ 0.86
SPTBN4-213ENST00000598775 ZNF496Q96IT1 587 aaPredicted RBP20.44■□□□□ 0.86
SPTBN4-213ENST00000598775 PHACTR3Q96KR7 559 aa20.44■□□□□ 0.86
SPTBN4-213ENST00000598775 FCHSD2O94868 740 aa20.43■□□□□ 0.86
SPTBN4-213ENST00000598775 PRKAR2BP31323 418 aa20.43■□□□□ 0.86
SPTBN4-213ENST00000598775 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
SPTBN4-213ENST00000598775 BCL2L12Q9HB09 334 aa20.43■□□□□ 0.86
SPTBN4-213ENST00000598775 NFIXQ14938 502 aa20.42■□□□□ 0.86
SPTBN4-213ENST00000598775 AFDNP55196 1824 aaKnown RBP20.41■□□□□ 0.86
SPTBN4-213ENST00000598775 A0A087WZG4 1122 aa20.41■□□□□ 0.86
SPTBN4-213ENST00000598775 FMNL2Q96PY5 1086 aa20.41■□□□□ 0.86
SPTBN4-213ENST00000598775 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
SPTBN4-213ENST00000598775 ARHGAP27Q6ZUM4 889 aa20.4■□□□□ 0.86
SPTBN4-213ENST00000598775 HTATSF1O43719 755 aaKnown RBP20.39■□□□□ 0.85
SPTBN4-213ENST00000598775 CANXP27824 592 aaKnown RBP20.39■□□□□ 0.85
SPTBN4-213ENST00000598775 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.85
SPTBN4-213ENST00000598775 BTBD11A6QL63 1104 aa20.38■□□□□ 0.85
SPTBN4-213ENST00000598775 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
SPTBN4-213ENST00000598775 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
SPTBN4-213ENST00000598775 KIF3CO14782 793 aa20.37■□□□□ 0.85
SPTBN4-213ENST00000598775 SERPINB2P05120 415 aa20.37■□□□□ 0.85
SPTBN4-213ENST00000598775 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
SPTBN4-213ENST00000598775 SCN7AQ01118 1682 aa20.36■□□□□ 0.85
SPTBN4-213ENST00000598775 CHRNA5P30532 468 aa20.36■□□□□ 0.85
SPTBN4-213ENST00000598775 ZNF526Q8TF50 670 aaPredicted RBP20.36■□□□□ 0.85
SPTBN4-213ENST00000598775 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
SPTBN4-213ENST00000598775 PDZRN3Q9UPQ7 1066 aa20.34■□□□□ 0.85
SPTBN4-213ENST00000598775 KCNQ3O43525 872 aa20.33■□□□□ 0.85
SPTBN4-213ENST00000598775 A1BGP04217 495 aa20.32■□□□□ 0.84
SPTBN4-213ENST00000598775 C9orf131Q5VYM1 1079 aa20.32■□□□□ 0.84
SPTBN4-213ENST00000598775 SBF1O95248 1867 aa20.32■□□□□ 0.84
SPTBN4-213ENST00000598775 RGL2O15211 777 aa20.31■□□□□ 0.84
SPTBN4-213ENST00000598775 HSPA6P17066 643 aa20.31■□□□□ 0.84
SPTBN4-213ENST00000598775 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
SPTBN4-213ENST00000598775 MCM10Q7L590 875 aa20.31■□□□□ 0.84
SPTBN4-213ENST00000598775 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
SPTBN4-213ENST00000598775 CARMIL3Q8ND23 1372 aa20.31■□□□□ 0.84
SPTBN4-213ENST00000598775 CAMTA2O94983 1202 aa20.3■□□□□ 0.84
SPTBN4-213ENST00000598775 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
SPTBN4-213ENST00000598775 TTLL6Q8N841 843 aa20.3■□□□□ 0.84
SPTBN4-213ENST00000598775 BCORQ6W2J9 1755 aa20.3■□□□□ 0.84
SPTBN4-213ENST00000598775 ZC3H4Q9UPT8 1303 aaKnown RBP20.29■□□□□ 0.84
SPTBN4-213ENST00000598775 H0YIN7 160 aa20.29■□□□□ 0.84
SPTBN4-213ENST00000598775 TOMM70O94826 608 aa20.29■□□□□ 0.84
SPTBN4-213ENST00000598775 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
SPTBN4-213ENST00000598775 BRIP1Q9BX63 1249 aa20.29■□□□□ 0.84
SPTBN4-213ENST00000598775 TBC1D2BQ9UPU7 963 aa20.29■□□□□ 0.84
SPTBN4-213ENST00000598775 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
SPTBN4-213ENST00000598775 CLEC4GQ6UXB4 293 aa20.28■□□□□ 0.84
SPTBN4-213ENST00000598775 PLEKHF1Q96S99 279 aa20.28■□□□□ 0.84
SPTBN4-213ENST00000598775 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
SPTBN4-213ENST00000598775 PDE6BP35913 854 aa20.27■□□□□ 0.84
SPTBN4-213ENST00000598775 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
SPTBN4-213ENST00000598775 C2CD5Q86YS7 1000 aa20.27■□□□□ 0.84
SPTBN4-213ENST00000598775 NEFMP07197 916 aa20.26■□□□□ 0.83
SPTBN4-213ENST00000598775 DCTN1Q14203 1278 aa20.26■□□□□ 0.83
SPTBN4-213ENST00000598775 PRR5LQ6MZQ0 368 aa20.26■□□□□ 0.83
SPTBN4-213ENST00000598775 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
SPTBN4-213ENST00000598775 SETDB2Q96T68 719 aa20.26■□□□□ 0.83
SPTBN4-213ENST00000598775 RNF181Q9P0P0 153 aa20.26■□□□□ 0.83
SPTBN4-213ENST00000598775 PNNQ9H307 717 aaKnown RBP20.25■□□□□ 0.83
SPTBN4-213ENST00000598775 ZNF330Q9Y3S2 320 aaPredicted RBP20.25■□□□□ 0.83
SPTBN4-213ENST00000598775 DLG5Q8TDM6 1919 aa20.25■□□□□ 0.83
SPTBN4-213ENST00000598775 KDM2BQ8NHM5 1336 aa20.25■□□□□ 0.83
SPTBN4-213ENST00000598775 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
SPTBN4-213ENST00000598775 LMNB1P20700 586 aa20.24■□□□□ 0.83
SPTBN4-213ENST00000598775 PNISRQ8TF01 805 aaKnown RBP20.24■□□□□ 0.83
SPTBN4-213ENST00000598775 NMRK2Q9NPI5 230 aa20.24■□□□□ 0.83
SPTBN4-213ENST00000598775 LAMB4A4D0S4 1761 aa20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 KDM3BQ7LBC6 1761 aa20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 NBPF26B4DH59 902 aa20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 NBPF10Q6P3W6 841 aaKnown RBP20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 NBPF15Q8N660 670 aa20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 CNBD1Q8NA66 436 aa20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 ZNF652Q9Y2D9 606 aa20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 TNRC6CQ9HCJ0 1690 aaKnown RBP20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
SPTBN4-213ENST00000598775 RALBP1Q15311 655 aa20.21■□□□□ 0.83
SPTBN4-213ENST00000598775 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
SPTBN4-213ENST00000598775 NFKBIEO00221 500 aa20.2■□□□□ 0.82
SPTBN4-213ENST00000598775 PRELPP51888 382 aa20.2■□□□□ 0.82
SPTBN4-213ENST00000598775 ST5P78524 1137 aa20.2■□□□□ 0.82
SPTBN4-213ENST00000598775 RASSF7Q02833 373 aa20.2■□□□□ 0.82
SPTBN4-213ENST00000598775 STYK1Q6J9G0 422 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms