RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 USPL1Q5W0Q7 1092 aa11.85□□□□□ -0.51
ARHGEF1-215ENST00000598444 BCS1LQ9Y276 419 aa11.85□□□□□ -0.51
ARHGEF1-215ENST00000598444 ZBTB1Q9Y2K1 713 aa11.85□□□□□ -0.51
ARHGEF1-215ENST00000598444 C10orf71Q711Q0 1435 aa11.85□□□□□ -0.51
ARHGEF1-215ENST00000598444 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF1-215ENST00000598444 FCHSD2O94868 740 aa11.84□□□□□ -0.51
ARHGEF1-215ENST00000598444 STARD3NLO95772 234 aa11.84□□□□□ -0.51
ARHGEF1-215ENST00000598444 TM4SF1P30408 202 aa11.84□□□□□ -0.51
ARHGEF1-215ENST00000598444 DDR1Q08345 913 aa11.84□□□□□ -0.51
ARHGEF1-215ENST00000598444 ZNF790Q6PG37 636 aa11.84□□□□□ -0.51
ARHGEF1-215ENST00000598444 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF1-215ENST00000598444 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
ARHGEF1-215ENST00000598444 COL15A1P39059 1388 aa11.83□□□□□ -0.52
ARHGEF1-215ENST00000598444 CCDC88AQ3V6T2 1871 aa11.83□□□□□ -0.52
ARHGEF1-215ENST00000598444 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-215ENST00000598444 ATP10DQ9P241 1426 aa11.83□□□□□ -0.52
ARHGEF1-215ENST00000598444 SBF1O95248 1867 aa11.83□□□□□ -0.52
ARHGEF1-215ENST00000598444 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
ARHGEF1-215ENST00000598444 BTBD11A6QL63 1104 aa11.82□□□□□ -0.52
ARHGEF1-215ENST00000598444 POLRMTO00411 1230 aaKnown RBP11.82□□□□□ -0.52
ARHGEF1-215ENST00000598444 KCNA3P22001 575 aa11.82□□□□□ -0.52
ARHGEF1-215ENST00000598444 ARHGAP27Q6ZUM4 889 aa11.82□□□□□ -0.52
ARHGEF1-215ENST00000598444 RTF1Q92541 710 aaKnown RBP11.82□□□□□ -0.52
ARHGEF1-215ENST00000598444 FMNL2Q96PY5 1086 aa11.82□□□□□ -0.52
ARHGEF1-215ENST00000598444 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
ARHGEF1-215ENST00000598444 CEMIPQ8WUJ3 1361 aa11.81□□□□□ -0.52
ARHGEF1-215ENST00000598444 KCNQ3O43525 872 aa11.81□□□□□ -0.52
ARHGEF1-215ENST00000598444 EIF5P55010 431 aaKnown RBP11.81□□□□□ -0.52
ARHGEF1-215ENST00000598444 NFIXQ14938 502 aa11.81□□□□□ -0.52
ARHGEF1-215ENST00000598444 ZNF526Q8TF50 670 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF1-215ENST00000598444 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF1-215ENST00000598444 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
ARHGEF1-215ENST00000598444 A0A087WZG4 1122 aa11.8□□□□□ -0.52
ARHGEF1-215ENST00000598444 A1BGP04217 495 aa11.8□□□□□ -0.52
ARHGEF1-215ENST00000598444 MCM10Q7L590 875 aa11.8□□□□□ -0.52
ARHGEF1-215ENST00000598444 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
ARHGEF1-215ENST00000598444 ZNF330Q9Y3S2 320 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF1-215ENST00000598444 SENP3-EIF4A1A0A087X0R7 540 aa11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 SERPINB2P05120 415 aa11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 NEFMP07197 916 aa11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 CHRNA5P30532 468 aa11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 DCTN1Q14203 1278 aa11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 DALRD3Q5D0E6 543 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 NPM2Q86SE8 214 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 CEP350Q5VT06 3117 aa11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 ADCY9O60503 1353 aa11.79□□□□□ -0.52
ARHGEF1-215ENST00000598444 HTATSF1O43719 755 aaKnown RBP11.78□□□□□ -0.52
ARHGEF1-215ENST00000598444 IL6STP40189 918 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF1-215ENST00000598444 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
ARHGEF1-215ENST00000598444 TBC1D2BQ9UPU7 963 aa11.78□□□□□ -0.52
ARHGEF1-215ENST00000598444 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
ARHGEF1-215ENST00000598444 DLEC1Q9Y238 1755 aa11.77□□□□□ -0.52
ARHGEF1-215ENST00000598444 CACNA1SQ13698 1873 aa11.77□□□□□ -0.53
ARHGEF1-215ENST00000598444 ANKRD31Q8N7Z5 1873 aa11.77□□□□□ -0.53
ARHGEF1-215ENST00000598444 TAF7Q15545 349 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF1-215ENST00000598444 SCN7AQ01118 1682 aa11.76□□□□□ -0.53
ARHGEF1-215ENST00000598444 SNRPA1P09661 255 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-215ENST00000598444 TBC1D9BQ66K14 1250 aa11.76□□□□□ -0.53
ARHGEF1-215ENST00000598444 MIS18AQ9NYP9 233 aa11.76□□□□□ -0.53
ARHGEF1-215ENST00000598444 BCORQ6W2J9 1755 aa11.75□□□□□ -0.53
ARHGEF1-215ENST00000598444 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
ARHGEF1-215ENST00000598444 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF1-215ENST00000598444 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-215ENST00000598444 PNNQ9H307 717 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-215ENST00000598444 H0YIN7 160 aa11.74□□□□□ -0.53
ARHGEF1-215ENST00000598444 C9orf131Q5VYM1 1079 aa11.74□□□□□ -0.53
ARHGEF1-215ENST00000598444 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
ARHGEF1-215ENST00000598444 C2CD5Q86YS7 1000 aa11.74□□□□□ -0.53
ARHGEF1-215ENST00000598444 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
ARHGEF1-215ENST00000598444 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
ARHGEF1-215ENST00000598444 KDM3BQ7LBC6 1761 aa11.74□□□□□ -0.53
ARHGEF1-215ENST00000598444 NUP98P52948 1817 aa11.74□□□□□ -0.53
ARHGEF1-215ENST00000598444 CAMTA2O94983 1202 aa11.73□□□□□ -0.53
ARHGEF1-215ENST00000598444 RALBP1Q15311 655 aa11.73□□□□□ -0.53
ARHGEF1-215ENST00000598444 NFE2L2Q16236 605 aa11.73□□□□□ -0.53
ARHGEF1-215ENST00000598444 CCDC24Q8N4L8 307 aa11.73□□□□□ -0.53
ARHGEF1-215ENST00000598444 TTLL6Q8N841 843 aa11.73□□□□□ -0.53
ARHGEF1-215ENST00000598444 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 CARMIL3Q8ND23 1372 aa11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 KIF3CO14782 793 aa11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 NPHP1O15259 732 aa11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 PDE6BP35913 854 aa11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 BRIP1Q9BX63 1249 aa11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 RNF181Q9P0P0 153 aa11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 DICER1Q9UPY3 1922 aaKnown RBP11.72□□□□□ -0.53
ARHGEF1-215ENST00000598444 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 PRR5LQ6MZQ0 368 aa11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 NBPF10Q6P3W6 841 aaKnown RBP11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 CLEC4GQ6UXB4 293 aa11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 NBPF15Q8N660 670 aa11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 PNISRQ8TF01 805 aaKnown RBP11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
ARHGEF1-215ENST00000598444 SLX4Q8IY92 1834 aa11.71□□□□□ -0.54
ARHGEF1-215ENST00000598444 FER1L6Q2WGJ9 1857 aa11.7□□□□□ -0.54
ARHGEF1-215ENST00000598444 COL11A2P13942 1736 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF1-215ENST00000598444 CNBD1Q8NA66 436 aa11.7□□□□□ -0.54
ARHGEF1-215ENST00000598444 ZNF652Q9Y2D9 606 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms