RNA–Protein interactions for RNA: ENST00000598362.1

GRAMD1A-208, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-208ENST00000598362 RIPK4P57078 832 aa9.9□□□□□ -0.82
GRAMD1A-208ENST00000598362 TEFQ10587 303 aa9.9□□□□□ -0.82
GRAMD1A-208ENST00000598362 FAM9BQ8IZU0 186 aa9.9□□□□□ -0.82
GRAMD1A-208ENST00000598362 ATG3Q9NT62 314 aa9.9□□□□□ -0.82
GRAMD1A-208ENST00000598362 BCS1LQ9Y276 419 aa9.9□□□□□ -0.82
GRAMD1A-208ENST00000598362 KDM2BQ8NHM5 1336 aa9.89□□□□□ -0.83
GRAMD1A-208ENST00000598362 APAF1O14727 1248 aa9.89□□□□□ -0.83
GRAMD1A-208ENST00000598362 NEUROD2Q15784 382 aa9.89□□□□□ -0.83
GRAMD1A-208ENST00000598362 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
GRAMD1A-208ENST00000598362 THUMPD2Q9BTF0 503 aaKnown RBP9.89□□□□□ -0.83
GRAMD1A-208ENST00000598362 ASAP1Q9ULH1 1129 aa9.89□□□□□ -0.83
GRAMD1A-208ENST00000598362 COL5A3P25940 1745 aaPredicted RBP9.88□□□□□ -0.83
GRAMD1A-208ENST00000598362 PHF14O94880 888 aa9.88□□□□□ -0.83
GRAMD1A-208ENST00000598362 HTRA3P83110 453 aa9.88□□□□□ -0.83
GRAMD1A-208ENST00000598362 TAF1LQ8IZX4 1826 aa9.88□□□□□ -0.83
GRAMD1A-208ENST00000598362 C4BP0C0L5 1744 aa9.87□□□□□ -0.83
GRAMD1A-208ENST00000598362 LOC102724428A0A0B4J2F2 783 aa9.87□□□□□ -0.83
GRAMD1A-208ENST00000598362 SIK1P57059 783 aa9.87□□□□□ -0.83
GRAMD1A-208ENST00000598362 SLC39A6Q13433 755 aa9.87□□□□□ -0.83
GRAMD1A-208ENST00000598362 NLGN1Q8N2Q7 840 aa9.87□□□□□ -0.83
GRAMD1A-208ENST00000598362 SMC1BQ8NDV3 1235 aa9.87□□□□□ -0.83
GRAMD1A-208ENST00000598362 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
GRAMD1A-208ENST00000598362 WDR90Q96KV7 1748 aa9.87□□□□□ -0.83
GRAMD1A-208ENST00000598362 LAMB4A4D0S4 1761 aa9.86□□□□□ -0.83
GRAMD1A-208ENST00000598362 A0A0G2JLW4 131 aa9.86□□□□□ -0.83
GRAMD1A-208ENST00000598362 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
GRAMD1A-208ENST00000598362 MMP10P09238 476 aa9.86□□□□□ -0.83
GRAMD1A-208ENST00000598362 C9orf131Q5VYM1 1079 aa9.86□□□□□ -0.83
GRAMD1A-208ENST00000598362 TTC5Q8N0Z6 440 aa9.86□□□□□ -0.83
GRAMD1A-208ENST00000598362 RRAGCQ9HB90 399 aa9.86□□□□□ -0.83
GRAMD1A-208ENST00000598362 SLC34A2O95436 690 aa9.85□□□□□ -0.83
GRAMD1A-208ENST00000598362 ITPK1Q13572 414 aa9.85□□□□□ -0.83
GRAMD1A-208ENST00000598362 ZNF790Q6PG37 636 aa9.85□□□□□ -0.83
GRAMD1A-208ENST00000598362 SLC4A9Q96Q91 983 aa9.85□□□□□ -0.83
GRAMD1A-208ENST00000598362 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
GRAMD1A-208ENST00000598362 HEG1Q9ULI3 1381 aa9.85□□□□□ -0.83
GRAMD1A-208ENST00000598362 KCNQ3O43525 872 aa9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 PTCD1O75127 700 aaKnown RBP9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 HSPA1AP0DMV8 641 aaKnown RBP9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 HSPA1BP0DMV9 641 aaKnown RBP9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 ATP6V1AP38606 617 aa9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 CCDC27Q2M243 656 aa9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 AMIGO3Q86WK7 504 aa9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 CCDC87Q9NVE4 849 aa9.84□□□□□ -0.83
GRAMD1A-208ENST00000598362 GNPATO15228 680 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 DPEP1P16444 411 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 TAF7Q15545 349 aaPredicted RBP9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 NCBP3Q53F19 620 aaKnown RBP9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 SMIM5Q71RC9 77 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 ZNF496Q96IT1 587 aaPredicted RBP9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 FMNL2Q96PY5 1086 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 MIS18AQ9NYP9 233 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 PIM2Q9P1W9 311 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 PCDH10Q9P2E7 1040 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 TSPYL4Q9UJ04 414 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 PXDNLA1KZ92 1463 aa9.83□□□□□ -0.84
GRAMD1A-208ENST00000598362 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 C10orf71Q711Q0 1435 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 CALD1Q05682 793 aaKnown RBP9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 DNAJC10Q8IXB1 793 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 VSIG10Q8N0Z9 540 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 BABAM1Q9NWV8 329 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 RNF181Q9P0P0 153 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 RTCBQ9Y3I0 505 aaKnown RBP9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 PARP3Q9Y6F1 533 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 UBR3Q6ZT12 1888 aa9.82□□□□□ -0.84
GRAMD1A-208ENST00000598362 VEGFAP15692 232 aaPredicted RBP9.81□□□□□ -0.84
GRAMD1A-208ENST00000598362 DALRD3Q5D0E6 543 aaKnown RBP9.81□□□□□ -0.84
GRAMD1A-208ENST00000598362 IFT57Q9NWB7 429 aa9.81□□□□□ -0.84
GRAMD1A-208ENST00000598362 SALL2Q9Y467 1007 aaPredicted RBP9.81□□□□□ -0.84
GRAMD1A-208ENST00000598362 LAS1LQ9Y4W2 734 aaKnown RBP9.81□□□□□ -0.84
GRAMD1A-208ENST00000598362 C4AP0C0L4 1744 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 CHL1O00533 1208 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 ZNF853P0CG23 659 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 ADRA2BP18089 450 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 KCNA3P22001 575 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 EIF4A1P60842 406 aaKnown RBP9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 NGEFQ8N5V2 710 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 IL16Q14005 1332 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 ZNF521Q96K83 1311 aa9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 ZC3H4Q9UPT8 1303 aaKnown RBP9.8□□□□□ -0.84
GRAMD1A-208ENST00000598362 PRAMEF22A3QJZ6 481 aa9.79□□□□□ -0.84
GRAMD1A-208ENST00000598362 SNRPA1P09661 255 aaKnown RBP9.79□□□□□ -0.84
GRAMD1A-208ENST00000598362 RFC4P35249 363 aa9.79□□□□□ -0.84
GRAMD1A-208ENST00000598362 CRKLP46109 303 aaKnown RBP9.79□□□□□ -0.84
GRAMD1A-208ENST00000598362 GNAI1P63096 354 aa9.79□□□□□ -0.84
GRAMD1A-208ENST00000598362 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
GRAMD1A-208ENST00000598362 MYH14Q7Z406 1995 aaKnown RBP9.79□□□□□ -0.84
GRAMD1A-208ENST00000598362 SCN7AQ01118 1682 aa9.78□□□□□ -0.84
GRAMD1A-208ENST00000598362 GLTPD2A6NH11 291 aa9.78□□□□□ -0.84
GRAMD1A-208ENST00000598362 CYP19A1P11511 503 aaPredicted RBP9.78□□□□□ -0.84
GRAMD1A-208ENST00000598362 WDR63Q8IWG1 891 aa9.78□□□□□ -0.84
GRAMD1A-208ENST00000598362 ARHGEF1Q92888 912 aaKnown RBP9.78□□□□□ -0.84
GRAMD1A-208ENST00000598362 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
GRAMD1A-208ENST00000598362 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms