RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 FSTL1Q12841 308 aa13.19□□□□□ -0.3
LINC00343-205ENST00000598229 TMC1Q8TDI8 760 aa13.19□□□□□ -0.3
LINC00343-205ENST00000598229 ROCK2O75116 1388 aaKnown RBP13.19□□□□□ -0.3
LINC00343-205ENST00000598229 PALLDQ8WX93 1383 aa13.19□□□□□ -0.3
LINC00343-205ENST00000598229 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
LINC00343-205ENST00000598229 CICQ96RK0 1608 aaPredicted RBP13.18□□□□□ -0.3
LINC00343-205ENST00000598229 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
LINC00343-205ENST00000598229 AMPHP49418 695 aa13.18□□□□□ -0.3
LINC00343-205ENST00000598229 TGFB2P61812 414 aa13.18□□□□□ -0.3
LINC00343-205ENST00000598229 DOT1LQ8TEK3 1739 aa13.18□□□□□ -0.3
LINC00343-205ENST00000598229 MEGF6O75095 1541 aa13.18□□□□□ -0.3
LINC00343-205ENST00000598229 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
LINC00343-205ENST00000598229 AMIGO3Q86WK7 504 aa13.17□□□□□ -0.3
LINC00343-205ENST00000598229 TNS4Q8IZW8 715 aa13.17□□□□□ -0.3
LINC00343-205ENST00000598229 RAPGEF4Q8WZA2 1011 aa13.17□□□□□ -0.3
LINC00343-205ENST00000598229 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
LINC00343-205ENST00000598229 NMRK2Q9NPI5 230 aa13.17□□□□□ -0.3
LINC00343-205ENST00000598229 ZNF687Q8N1G0 1237 aa13.16□□□□□ -0.3
LINC00343-205ENST00000598229 COG3Q96JB2 828 aa13.16□□□□□ -0.3
LINC00343-205ENST00000598229 WWC3Q9ULE0 1092 aa13.16□□□□□ -0.3
LINC00343-205ENST00000598229 PCDH11XQ9BZA7 1347 aa13.15□□□□□ -0.3
LINC00343-205ENST00000598229 PCDH11YQ9BZA8 1340 aa13.15□□□□□ -0.3
LINC00343-205ENST00000598229 C5P01031 1676 aa13.15□□□□□ -0.3
LINC00343-205ENST00000598229 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
LINC00343-205ENST00000598229 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.3
LINC00343-205ENST00000598229 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
LINC00343-205ENST00000598229 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
LINC00343-205ENST00000598229 PHF14O94880 888 aa13.14□□□□□ -0.31
LINC00343-205ENST00000598229 ARHGAP27Q6ZUM4 889 aa13.14□□□□□ -0.31
LINC00343-205ENST00000598229 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
LINC00343-205ENST00000598229 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
LINC00343-205ENST00000598229 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
LINC00343-205ENST00000598229 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
LINC00343-205ENST00000598229 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
LINC00343-205ENST00000598229 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
LINC00343-205ENST00000598229 CYP27B1O15528 508 aa13.12□□□□□ -0.31
LINC00343-205ENST00000598229 MMP10P09238 476 aa13.12□□□□□ -0.31
LINC00343-205ENST00000598229 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
LINC00343-205ENST00000598229 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
LINC00343-205ENST00000598229 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
LINC00343-205ENST00000598229 PIGBQ92521 554 aa13.12□□□□□ -0.31
LINC00343-205ENST00000598229 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 A0A0G2JLW4 131 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 FBLN1P23142 703 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 SIK1P57059 783 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 HTRA3P83110 453 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 SMIM5Q71RC9 77 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
LINC00343-205ENST00000598229 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
LINC00343-205ENST00000598229 C9orf131Q5VYM1 1079 aa13.1□□□□□ -0.31
LINC00343-205ENST00000598229 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
LINC00343-205ENST00000598229 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
LINC00343-205ENST00000598229 C10orf71Q711Q0 1435 aa13.1□□□□□ -0.31
LINC00343-205ENST00000598229 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
LINC00343-205ENST00000598229 GNPATO15228 680 aa13.09□□□□□ -0.31
LINC00343-205ENST00000598229 FCHSD2O94868 740 aa13.09□□□□□ -0.31
LINC00343-205ENST00000598229 TMF1P82094 1093 aa13.09□□□□□ -0.31
LINC00343-205ENST00000598229 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
LINC00343-205ENST00000598229 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
LINC00343-205ENST00000598229 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
LINC00343-205ENST00000598229 DPEP1P16444 411 aa13.08□□□□□ -0.32
LINC00343-205ENST00000598229 HS6ST3Q8IZP7 471 aa13.08□□□□□ -0.32
LINC00343-205ENST00000598229 SMC1BQ8NDV3 1235 aa13.08□□□□□ -0.32
LINC00343-205ENST00000598229 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
LINC00343-205ENST00000598229 INSRP06213 1382 aa13.07□□□□□ -0.32
LINC00343-205ENST00000598229 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
LINC00343-205ENST00000598229 SLC34A2O95436 690 aa13.07□□□□□ -0.32
LINC00343-205ENST00000598229 KCNA3P22001 575 aa13.07□□□□□ -0.32
LINC00343-205ENST00000598229 ITPK1Q13572 414 aa13.07□□□□□ -0.32
LINC00343-205ENST00000598229 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
LINC00343-205ENST00000598229 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
LINC00343-205ENST00000598229 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
LINC00343-205ENST00000598229 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
LINC00343-205ENST00000598229 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
LINC00343-205ENST00000598229 RRAGCQ9HB90 399 aa13.06□□□□□ -0.32
LINC00343-205ENST00000598229 PIM2Q9P1W9 311 aa13.06□□□□□ -0.32
LINC00343-205ENST00000598229 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
LINC00343-205ENST00000598229 FYB1O15117 783 aa13.05□□□□□ -0.32
LINC00343-205ENST00000598229 HSP90AB2PQ58FF8 381 aa13.05□□□□□ -0.32
LINC00343-205ENST00000598229 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
LINC00343-205ENST00000598229 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00343-205ENST00000598229 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
LINC00343-205ENST00000598229 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
LINC00343-205ENST00000598229 ASAP1Q9ULH1 1129 aa13.05□□□□□ -0.32
LINC00343-205ENST00000598229 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
LINC00343-205ENST00000598229 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
LINC00343-205ENST00000598229 PCNTO95613 3336 aa13.05□□□□□ -0.32
LINC00343-205ENST00000598229 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
LINC00343-205ENST00000598229 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
LINC00343-205ENST00000598229 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
LINC00343-205ENST00000598229 ZC3H4Q9UPT8 1303 aaKnown RBP13.04□□□□□ -0.32
LINC00343-205ENST00000598229 KIAA1551Q9HCM1 1747 aa13.03□□□□□ -0.32
LINC00343-205ENST00000598229 PPP1R37O75864 691 aa13.03□□□□□ -0.32
LINC00343-205ENST00000598229 HSPA1AP0DMV8 641 aaKnown RBP13.03□□□□□ -0.32
LINC00343-205ENST00000598229 HSPA1BP0DMV9 641 aaKnown RBP13.03□□□□□ -0.32
LINC00343-205ENST00000598229 DALRD3Q5D0E6 543 aaKnown RBP13.03□□□□□ -0.32
LINC00343-205ENST00000598229 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
LINC00343-205ENST00000598229 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms