RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 NARFQ9UHQ1 456 aa30.61■■■□□ 2.49
SSBP4-205ENST00000598159 GOLGB1Q14789 3259 aaKnown RBP30.61■■■□□ 2.49
SSBP4-205ENST00000598159 KIF13BQ9NQT8 1826 aa30.61■■■□□ 2.49
SSBP4-205ENST00000598159 USPL1Q5W0Q7 1092 aa30.6■■■□□ 2.49
SSBP4-205ENST00000598159 CANXP27824 592 aaKnown RBP30.59■■■□□ 2.49
SSBP4-205ENST00000598159 TM4SF1P30408 202 aa30.59■■■□□ 2.49
SSBP4-205ENST00000598159 DDX10Q13206 875 aaKnown RBP30.59■■■□□ 2.49
SSBP4-205ENST00000598159 PNNQ9H307 717 aaKnown RBP30.59■■■□□ 2.49
SSBP4-205ENST00000598159 COL15A1P39059 1388 aa30.58■■■□□ 2.49
SSBP4-205ENST00000598159 MCM10Q7L590 875 aa30.58■■■□□ 2.49
SSBP4-205ENST00000598159 C10orf71Q711Q0 1435 aa30.56■■■□□ 2.48
SSBP4-205ENST00000598159 A0A087WZG4 1122 aa30.56■■■□□ 2.48
SSBP4-205ENST00000598159 A0A0G2JLW4 131 aa30.56■■■□□ 2.48
SSBP4-205ENST00000598159 EIF5P55010 431 aaKnown RBP30.56■■■□□ 2.48
SSBP4-205ENST00000598159 KCNQ3O43525 872 aa30.55■■■□□ 2.48
SSBP4-205ENST00000598159 WWC3Q9ULE0 1092 aa30.55■■■□□ 2.48
SSBP4-205ENST00000598159 DDR1Q08345 913 aa30.54■■■□□ 2.48
SSBP4-205ENST00000598159 PLEKHF1Q96S99 279 aa30.54■■■□□ 2.48
SSBP4-205ENST00000598159 PXDNLA1KZ92 1463 aa30.54■■■□□ 2.48
SSBP4-205ENST00000598159 POLRMTO00411 1230 aaKnown RBP30.53■■■□□ 2.48
SSBP4-205ENST00000598159 DCTN1Q14203 1278 aa30.53■■■□□ 2.48
SSBP4-205ENST00000598159 DPEP1P16444 411 aa30.52■■■□□ 2.48
SSBP4-205ENST00000598159 TAF7Q15545 349 aaPredicted RBP30.52■■■□□ 2.48
SSBP4-205ENST00000598159 N4BP2Q86UW6 1770 aaPredicted RBP30.51■■■□□ 2.47
SSBP4-205ENST00000598159 IL6STP40189 918 aaPredicted RBP30.5■■■□□ 2.47
SSBP4-205ENST00000598159 BCL2L12Q9HB09 334 aa30.5■■■□□ 2.47
SSBP4-205ENST00000598159 NFIXQ14938 502 aa30.49■■■□□ 2.47
SSBP4-205ENST00000598159 NPM2Q86SE8 214 aaKnown RBP30.49■■■□□ 2.47
SSBP4-205ENST00000598159 KIAA1551Q9HCM1 1747 aa30.48■■■□□ 2.47
SSBP4-205ENST00000598159 A1BGP04217 495 aa30.48■■■□□ 2.47
SSBP4-205ENST00000598159 SNRPA1P09661 255 aaKnown RBP30.48■■■□□ 2.47
SSBP4-205ENST00000598159 BCS1LQ9Y276 419 aa30.48■■■□□ 2.47
SSBP4-205ENST00000598159 USP16Q9Y5T5 823 aa30.48■■■□□ 2.47
SSBP4-205ENST00000598159 KCNA3P22001 575 aa30.47■■■□□ 2.47
SSBP4-205ENST00000598159 NFE2L2Q16236 605 aa30.47■■■□□ 2.47
SSBP4-205ENST00000598159 PIM2Q9P1W9 311 aa30.46■■■□□ 2.47
SSBP4-205ENST00000598159 MAPK8IP3Q9UPT6 1336 aa30.46■■■□□ 2.47
SSBP4-205ENST00000598159 PNISRQ8TF01 805 aaKnown RBP30.45■■■□□ 2.47
SSBP4-205ENST00000598159 SERPINB2P05120 415 aa30.44■■■□□ 2.46
SSBP4-205ENST00000598159 ZNF330Q9Y3S2 320 aaPredicted RBP30.44■■■□□ 2.46
SSBP4-205ENST00000598159 MYBBP1AQ9BQG0 1328 aaKnown RBP30.44■■■□□ 2.46
SSBP4-205ENST00000598159 DLG5Q8TDM6 1919 aa30.43■■■□□ 2.46
SSBP4-205ENST00000598159 TBC1D2BQ9UPU7 963 aa30.43■■■□□ 2.46
SSBP4-205ENST00000598159 PRAMEF22A3QJZ6 481 aa30.4■■■□□ 2.46
SSBP4-205ENST00000598159 MIS18AQ9NYP9 233 aa30.4■■■□□ 2.46
SSBP4-205ENST00000598159 AFDNP55196 1824 aaKnown RBP30.39■■■□□ 2.46
SSBP4-205ENST00000598159 BICDL1Q6ZP65 573 aa30.39■■■□□ 2.46
SSBP4-205ENST00000598159 BRCA1P38398 1863 aaKnown RBP30.39■■■□□ 2.46
SSBP4-205ENST00000598159 DALRD3Q5D0E6 543 aaKnown RBP30.38■■■□□ 2.45
SSBP4-205ENST00000598159 TBC1D9BQ66K14 1250 aa30.38■■■□□ 2.45
SSBP4-205ENST00000598159 ARHGAP27Q6ZUM4 889 aa30.38■■■□□ 2.45
SSBP4-205ENST00000598159 NRXN2Q9P2S2 1712 aa30.37■■■□□ 2.45
SSBP4-205ENST00000598159 CHRNA5P30532 468 aa30.37■■■□□ 2.45
SSBP4-205ENST00000598159 DZIP3Q86Y13 1208 aaKnown RBP30.37■■■□□ 2.45
SSBP4-205ENST00000598159 CAMTA2O94983 1202 aa30.36■■■□□ 2.45
SSBP4-205ENST00000598159 GIGYF1O75420 1035 aaPredicted RBP30.35■■■□□ 2.45
SSBP4-205ENST00000598159 ATP10DQ9P241 1426 aa30.35■■■□□ 2.45
SSBP4-205ENST00000598159 ADCY9O60503 1353 aa30.34■■■□□ 2.45
SSBP4-205ENST00000598159 RIPK4P57078 832 aa30.34■■■□□ 2.45
SSBP4-205ENST00000598159 SETDB2Q96T68 719 aa30.34■■■□□ 2.45
SSBP4-205ENST00000598159 PIP4K2AP48426 406 aaPredicted RBP30.33■■■□□ 2.45
SSBP4-205ENST00000598159 C1QTNF8P60827 252 aa30.33■■■□□ 2.45
SSBP4-205ENST00000598159 CLEC4GQ6UXB4 293 aa30.33■■■□□ 2.45
SSBP4-205ENST00000598159 THUMPD2Q9BTF0 503 aaKnown RBP30.33■■■□□ 2.45
SSBP4-205ENST00000598159 ARFGEF1Q9Y6D6 1849 aa30.33■■■□□ 2.45
SSBP4-205ENST00000598159 ZEB1P37275 1124 aaPredicted RBP30.32■■■□□ 2.44
SSBP4-205ENST00000598159 EIF4A1P60842 406 aaKnown RBP30.31■■■□□ 2.44
SSBP4-205ENST00000598159 GPBP1L1Q9HC44 474 aaPredicted RBP30.31■■■□□ 2.44
SSBP4-205ENST00000598159 CARMIL3Q8ND23 1372 aa30.3■■■□□ 2.44
SSBP4-205ENST00000598159 NBPF26B4DH59 902 aa30.3■■■□□ 2.44
SSBP4-205ENST00000598159 H0YIN7 160 aa30.3■■■□□ 2.44
SSBP4-205ENST00000598159 TMPOP42166 694 aaKnown RBP30.3■■■□□ 2.44
SSBP4-205ENST00000598159 NBPF10Q6P3W6 841 aaKnown RBP30.3■■■□□ 2.44
SSBP4-205ENST00000598159 NBPF15Q8N660 670 aa30.3■■■□□ 2.44
SSBP4-205ENST00000598159 PRKRIP1Q9H875 184 aaPredicted RBP30.3■■■□□ 2.44
SSBP4-205ENST00000598159 PDZRN3Q9UPQ7 1066 aa30.3■■■□□ 2.44
SSBP4-205ENST00000598159 SCN7AQ01118 1682 aa30.3■■■□□ 2.44
SSBP4-205ENST00000598159 LMOD3Q0VAK6 560 aa30.29■■■□□ 2.44
SSBP4-205ENST00000598159 BRIP1Q9BX63 1249 aa30.29■■■□□ 2.44
SSBP4-205ENST00000598159 ZNF652Q9Y2D9 606 aa30.29■■■□□ 2.44
SSBP4-205ENST00000598159 RGL2O15211 777 aa30.28■■■□□ 2.44
SSBP4-205ENST00000598159 WDR43Q15061 677 aaKnown RBP eCLIP30.28■■■□□ 2.44
SSBP4-205ENST00000598159 C2CD5Q86YS7 1000 aa30.28■■■□□ 2.44
SSBP4-205ENST00000598159 KDM3BQ7LBC6 1761 aa30.28■■■□□ 2.44
SSBP4-205ENST00000598159 PDE6BP35913 854 aa30.27■■■□□ 2.44
SSBP4-205ENST00000598159 BABAM1Q9NWV8 329 aa30.27■■■□□ 2.44
SSBP4-205ENST00000598159 PRR5LQ6MZQ0 368 aa30.26■■■□□ 2.43
SSBP4-205ENST00000598159 TTLL6Q8N841 843 aa30.26■■■□□ 2.43
SSBP4-205ENST00000598159 RUNDC1Q96C34 613 aa30.25■■■□□ 2.43
SSBP4-205ENST00000598159 NPHP1O15259 732 aa30.24■■■□□ 2.43
SSBP4-205ENST00000598159 ZNF526Q8TF50 670 aaPredicted RBP30.24■■■□□ 2.43
SSBP4-205ENST00000598159 TSPYL4Q9UJ04 414 aa30.24■■■□□ 2.43
SSBP4-205ENST00000598159 BCORQ6W2J9 1755 aa30.23■■■□□ 2.43
SSBP4-205ENST00000598159 CCDC146Q8IYE0 955 aa30.23■■■□□ 2.43
SSBP4-205ENST00000598159 CNBD1Q8NA66 436 aa30.23■■■□□ 2.43
SSBP4-205ENST00000598159 ADAMTS8Q9UP79 889 aa30.23■■■□□ 2.43
SSBP4-205ENST00000598159 ST5P78524 1137 aa30.21■■■□□ 2.43
SSBP4-205ENST00000598159 C9orf131Q5VYM1 1079 aa30.21■■■□□ 2.43
SSBP4-205ENST00000598159 LAMB4A4D0S4 1761 aa30.2■■■□□ 2.43
SSBP4-205ENST00000598159 NEUROD2Q15784 382 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms