RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 TTC5Q8N0Z6 440 aa28.61■■■□□ 2.17
SYMPK-208ENST00000598059 KCNA3P22001 575 aa28.6■■■□□ 2.17
SYMPK-208ENST00000598059 TM4SF1P30408 202 aa28.6■■■□□ 2.17
SYMPK-208ENST00000598059 PHACTR3Q96KR7 559 aa28.6■■■□□ 2.17
SYMPK-208ENST00000598059 RSPH6AQ9H0K4 717 aa28.6■■■□□ 2.17
SYMPK-208ENST00000598059 GPBP1L1Q9HC44 474 aaPredicted RBP28.6■■■□□ 2.17
SYMPK-208ENST00000598059 COL15A1P39059 1388 aa28.6■■■□□ 2.17
SYMPK-208ENST00000598059 POLRMTO00411 1230 aaKnown RBP28.59■■■□□ 2.17
SYMPK-208ENST00000598059 PPP2R1AP30153 589 aa28.59■■■□□ 2.17
SYMPK-208ENST00000598059 PRKAR2BP31323 418 aa28.59■■■□□ 2.17
SYMPK-208ENST00000598059 NARFQ9UHQ1 456 aa28.59■■■□□ 2.17
SYMPK-208ENST00000598059 ZNF790Q6PG37 636 aa28.58■■■□□ 2.17
SYMPK-208ENST00000598059 ZNF526Q8TF50 670 aaPredicted RBP28.57■■■□□ 2.16
SYMPK-208ENST00000598059 ZNF496Q96IT1 587 aaPredicted RBP28.57■■■□□ 2.16
SYMPK-208ENST00000598059 NUDCQ9Y266 331 aa28.57■■■□□ 2.16
SYMPK-208ENST00000598059 FCHSD2O94868 740 aa28.56■■■□□ 2.16
SYMPK-208ENST00000598059 STARD3NLO95772 234 aa28.56■■■□□ 2.16
SYMPK-208ENST00000598059 CEMIPQ8WUJ3 1361 aa28.56■■■□□ 2.16
SYMPK-208ENST00000598059 ARFGEF1Q9Y6D6 1849 aa28.55■■■□□ 2.16
SYMPK-208ENST00000598059 HEG1Q9ULI3 1381 aa28.54■■■□□ 2.16
SYMPK-208ENST00000598059 CANXP27824 592 aaKnown RBP28.54■■■□□ 2.16
SYMPK-208ENST00000598059 PIM2Q9P1W9 311 aa28.54■■■□□ 2.16
SYMPK-208ENST00000598059 AFDNP55196 1824 aaKnown RBP28.54■■■□□ 2.16
SYMPK-208ENST00000598059 U2AF1L5P0DN76 240 aaPredicted RBP28.53■■■□□ 2.16
SYMPK-208ENST00000598059 U2AF1Q01081 240 aaKnown RBP eCLIP28.53■■■□□ 2.16
SYMPK-208ENST00000598059 NFIXQ14938 502 aa28.53■■■□□ 2.16
SYMPK-208ENST00000598059 ARHGAP27Q6ZUM4 889 aa28.53■■■□□ 2.16
SYMPK-208ENST00000598059 BCL2L12Q9HB09 334 aa28.53■■■□□ 2.16
SYMPK-208ENST00000598059 EIF5P55010 431 aaKnown RBP28.52■■■□□ 2.16
SYMPK-208ENST00000598059 TEX13AQ9BXU3 409 aaPredicted RBP28.52■■■□□ 2.16
SYMPK-208ENST00000598059 DDX10Q13206 875 aaKnown RBP28.51■■■□□ 2.15
SYMPK-208ENST00000598059 NRXN2Q9P2S2 1712 aa28.5■■■□□ 2.15
SYMPK-208ENST00000598059 CHRNA5P30532 468 aa28.5■■■□□ 2.15
SYMPK-208ENST00000598059 DALRD3Q5D0E6 543 aaKnown RBP28.49■■■□□ 2.15
SYMPK-208ENST00000598059 FMNL2Q96PY5 1086 aa28.49■■■□□ 2.15
SYMPK-208ENST00000598059 BTBD11A6QL63 1104 aa28.48■■■□□ 2.15
SYMPK-208ENST00000598059 A0A087WZG4 1122 aa28.47■■■□□ 2.15
SYMPK-208ENST00000598059 KCNQ3O43525 872 aa28.46■■■□□ 2.15
SYMPK-208ENST00000598059 SERPINB2P05120 415 aa28.46■■■□□ 2.15
SYMPK-208ENST00000598059 IL6STP40189 918 aaPredicted RBP28.44■■■□□ 2.14
SYMPK-208ENST00000598059 MCM10Q7L590 875 aa28.44■■■□□ 2.14
SYMPK-208ENST00000598059 RTF1Q92541 710 aaKnown RBP28.44■■■□□ 2.14
SYMPK-208ENST00000598059 KIF3CO14782 793 aa28.42■■■□□ 2.14
SYMPK-208ENST00000598059 A1BGP04217 495 aa28.42■■■□□ 2.14
SYMPK-208ENST00000598059 ZNF330Q9Y3S2 320 aaPredicted RBP28.42■■■□□ 2.14
SYMPK-208ENST00000598059 SCN7AQ01118 1682 aa28.42■■■□□ 2.14
SYMPK-208ENST00000598059 BICDL1Q6ZP65 573 aa28.41■■■□□ 2.14
SYMPK-208ENST00000598059 TBC1D2BQ9UPU7 963 aa28.41■■■□□ 2.14
SYMPK-208ENST00000598059 C9orf131Q5VYM1 1079 aa28.4■■■□□ 2.14
SYMPK-208ENST00000598059 TBC1D9BQ66K14 1250 aa28.4■■■□□ 2.14
SYMPK-208ENST00000598059 DLEC1Q9Y238 1755 aa28.39■■■□□ 2.14
SYMPK-208ENST00000598059 HTATSF1O43719 755 aaKnown RBP28.39■■■□□ 2.14
SYMPK-208ENST00000598059 DCTN1Q14203 1278 aa28.39■■■□□ 2.14
SYMPK-208ENST00000598059 SBF1O95248 1867 aa28.38■■■□□ 2.13
SYMPK-208ENST00000598059 USP16Q9Y5T5 823 aa28.38■■■□□ 2.13
SYMPK-208ENST00000598059 CARMIL3Q8ND23 1372 aa28.37■■■□□ 2.13
SYMPK-208ENST00000598059 NPM2Q86SE8 214 aaKnown RBP28.37■■■□□ 2.13
SYMPK-208ENST00000598059 PRAMEF22A3QJZ6 481 aa28.35■■■□□ 2.13
SYMPK-208ENST00000598059 SNRPA1P09661 255 aaKnown RBP28.35■■■□□ 2.13
SYMPK-208ENST00000598059 ANKRD31Q8N7Z5 1873 aa28.34■■■□□ 2.13
SYMPK-208ENST00000598059 CAMTA2O94983 1202 aa28.34■■■□□ 2.13
SYMPK-208ENST00000598059 C2CD5Q86YS7 1000 aa28.34■■■□□ 2.13
SYMPK-208ENST00000598059 DLG5Q8TDM6 1919 aa28.33■■■□□ 2.13
SYMPK-208ENST00000598059 H0YIN7 160 aa28.33■■■□□ 2.13
SYMPK-208ENST00000598059 HSPA6P17066 643 aa28.33■■■□□ 2.13
SYMPK-208ENST00000598059 TTLL6Q8N841 843 aa28.33■■■□□ 2.13
SYMPK-208ENST00000598059 RNF181Q9P0P0 153 aa28.33■■■□□ 2.13
SYMPK-208ENST00000598059 BCORQ6W2J9 1755 aa28.32■■■□□ 2.12
SYMPK-208ENST00000598059 PIP4K2AP48426 406 aaPredicted RBP28.32■■■□□ 2.12
SYMPK-208ENST00000598059 DZIP3Q86Y13 1208 aaKnown RBP28.32■■■□□ 2.12
SYMPK-208ENST00000598059 NMRK2Q9NPI5 230 aa28.32■■■□□ 2.12
SYMPK-208ENST00000598059 TAF7Q15545 349 aaPredicted RBP28.31■■■□□ 2.12
SYMPK-208ENST00000598059 PRR5LQ6MZQ0 368 aa28.31■■■□□ 2.12
SYMPK-208ENST00000598059 NEFMP07197 916 aa28.3■■■□□ 2.12
SYMPK-208ENST00000598059 PLEKHF1Q96S99 279 aa28.3■■■□□ 2.12
SYMPK-208ENST00000598059 SETDB2Q96T68 719 aa28.3■■■□□ 2.12
SYMPK-208ENST00000598059 BRIP1Q9BX63 1249 aa28.3■■■□□ 2.12
SYMPK-208ENST00000598059 TOMM70O94826 608 aa28.28■■■□□ 2.12
SYMPK-208ENST00000598059 PDE6BP35913 854 aa28.28■■■□□ 2.12
SYMPK-208ENST00000598059 RASSF7Q02833 373 aa28.28■■■□□ 2.12
SYMPK-208ENST00000598059 CCDC24Q8N4L8 307 aa28.28■■■□□ 2.12
SYMPK-208ENST00000598059 PDZRN3Q9UPQ7 1066 aa28.28■■■□□ 2.12
SYMPK-208ENST00000598059 MIS18AQ9NYP9 233 aa28.27■■■□□ 2.12
SYMPK-208ENST00000598059 CNBD1Q8NA66 436 aa28.26■■■□□ 2.11
SYMPK-208ENST00000598059 COL11A2P13942 1736 aaPredicted RBP28.26■■■□□ 2.11
SYMPK-208ENST00000598059 NBPF26B4DH59 902 aa28.25■■■□□ 2.11
SYMPK-208ENST00000598059 NBPF10Q6P3W6 841 aaKnown RBP28.25■■■□□ 2.11
SYMPK-208ENST00000598059 CLEC4GQ6UXB4 293 aa28.25■■■□□ 2.11
SYMPK-208ENST00000598059 NBPF15Q8N660 670 aa28.25■■■□□ 2.11
SYMPK-208ENST00000598059 CCDC88AQ3V6T2 1871 aa28.25■■■□□ 2.11
SYMPK-208ENST00000598059 KDM2BQ8NHM5 1336 aa28.24■■■□□ 2.11
SYMPK-208ENST00000598059 LMNB1P20700 586 aa28.24■■■□□ 2.11
SYMPK-208ENST00000598059 ZNF622Q969S3 477 aaKnown RBP eCLIP28.24■■■□□ 2.112e-9■□□□□ 9.6
SYMPK-208ENST00000598059 NPHP1O15259 732 aa28.23■■■□□ 2.11
SYMPK-208ENST00000598059 PRELPP51888 382 aa28.23■■■□□ 2.11
SYMPK-208ENST00000598059 NFE2L2Q16236 605 aa28.23■■■□□ 2.11
SYMPK-208ENST00000598059 KDM3BQ7LBC6 1761 aa28.23■■■□□ 2.11
SYMPK-208ENST00000598059 ZC3H4Q9UPT8 1303 aaKnown RBP28.22■■■□□ 2.11
SYMPK-208ENST00000598059 LAMB4A4D0S4 1761 aa28.22■■■□□ 2.11
SYMPK-208ENST00000598059 PNISRQ8TF01 805 aaKnown RBP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms